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The map label for this gene is petA

Identifier: 158337568

GI number: 158337568

Start: 4480067

End: 4481014

Strand: Reverse

Name: petA

Synonym: AM1_4449

Alternate gene names: 158337568

Gene position: 4481014-4480067 (Counterclockwise)

Preceding gene: 158337569

Following gene: 158337567

Centisome position: 68.9

GC content: 49.58

Gene sequence:

>948_bases
ATGAAGCAAAGCCTTTTATCCGTCTTGACGAAAAAGAGCCTTCGCCTCCTGGCTGCGCTCTTCCTTGTCGTCACTAGCGT
CTTTTCCTTACCCCAAGCTGCTCAGGCTTTTCCAATCTACGCTCAACAAGCCTACGATAGCCCTAGAGAAGCCAACGGTC
GTATTGTTTGTGCTAACTGCCACCTTGCAGCTAAGCCCACCCAAGTAGAAGTCCCCCAGGCCGTCCTACCCGATACAGTG
TTTGAGGCCGTTATCAAAATTCCTTATGACACGGATGCCCAGCAAGTCCTAGGTAGCGGTGACCTAGGTCCTCTAAATGT
TGGTGCAGTTCTGATGCTGCCCGATGGCTTCCAAATTGCCCCCGATGATCGGATTCCTGAAAAGATGAAGGAAGAGATTA
ACGGCGTCTTTTACCAGAAGTACAAGCCTGATACGGATAATGTAATCGTCGTCGGCCCTCTATCGGGTGCTGACCACCAG
GAAATTATCTTCCCCGTCCTTTCTCCTGACCCAGCAACAGATCCCAATATCCACTTTGGCAAATACTCTGTTCATGCAGG
TGGTAACCGTGGGCGTGGTCAGATTTATCCCACAGGTGACAAGACGAACGTCAATGCCGTTACTTCTCCTGCTGCCGGTT
TAGTCAGCAGCGTCAGTGAAAATTCCGTGACCATCACCACTAATGATGGTCAGACCGTCACTGAGTCGATTCCCGCTGGT
TTAGAAGTTGTGGTCTCAGAAGGACAGGCTGTGGCTGATGGTGCCCCCCTCAGTTCTGACCCCAATGTGGGTGGTTTTGG
TCAAAAAGATACCGAAATTGTGTTGCAGAGTGGCACTCGGATTAAGTGGTTGATGGTCTTCTTCTCAGCCATTATGATTT
CTCAAACACTTCTGGTTCTAAAGAAGAAGCAAGTCGAGAAAGTCCAAGCTGCCGAAATGAACTTCTAA

Upstream 100 bases:

>100_bases
ACAGATAAGGATCCCTGGTGGGTCTAAGTTTCCTTGAACGTTTAAGCTGATTTATCCCTTCTGCCCCGTCACATCTTGTC
AGGTTTCAATTGATAGACTA

Downstream 100 bases:

>100_bases
CACATCACACGATTCATTTCTTTGAAATCAGCAGGATTTCCTTTCATTGGAAATCCTGCTTTTTTAGTGCGTGAAAGAGG
AGAATCCCTGGCCCATAGTT

Product: apocytochrome f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKQSLLSVLTKKSLRLLAALFLVVTSVFSLPQAAQAFPIYAQQAYDSPREANGRIVCANCHLAAKPTQVEVPQAVLPDTV
FEAVIKIPYDTDAQQVLGSGDLGPLNVGAVLMLPDGFQIAPDDRIPEKMKEEINGVFYQKYKPDTDNVIVVGPLSGADHQ
EIIFPVLSPDPATDPNIHFGKYSVHAGGNRGRGQIYPTGDKTNVNAVTSPAAGLVSSVSENSVTITTNDGQTVTESIPAG
LEVVVSEGQAVADGAPLSSDPNVGGFGQKDTEIVLQSGTRIKWLMVFFSAIMISQTLLVLKKKQVEKVQAAEMNF

Sequences:

>Translated_315_residues
MKQSLLSVLTKKSLRLLAALFLVVTSVFSLPQAAQAFPIYAQQAYDSPREANGRIVCANCHLAAKPTQVEVPQAVLPDTV
FEAVIKIPYDTDAQQVLGSGDLGPLNVGAVLMLPDGFQIAPDDRIPEKMKEEINGVFYQKYKPDTDNVIVVGPLSGADHQ
EIIFPVLSPDPATDPNIHFGKYSVHAGGNRGRGQIYPTGDKTNVNAVTSPAAGLVSSVSENSVTITTNDGQTVTESIPAG
LEVVVSEGQAVADGAPLSSDPNVGGFGQKDTEIVLQSGTRIKWLMVFFSAIMISQTLLVLKKKQVEKVQAAEMNF
>Mature_315_residues
MKQSLLSVLTKKSLRLLAALFLVVTSVFSLPQAAQAFPIYAQQAYDSPREANGRIVCANCHLAAKPTQVEVPQAVLPDTV
FEAVIKIPYDTDAQQVLGSGDLGPLNVGAVLMLPDGFQIAPDDRIPEKMKEEINGVFYQKYKPDTDNVIVVGPLSGADHQ
EIIFPVLSPDPATDPNIHFGKYSVHAGGNRGRGQIYPTGDKTNVNAVTSPAAGLVSSVSENSVTITTNDGQTVTESIPAG
LEVVVSEGQAVADGAPLSSDPNVGGFGQKDTEIVLQSGTRIKWLMVFFSAIMISQTLLVLKKKQVEKVQAAEMNF

Specific function: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome f family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYF_ACAM1 (B0CFX9)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001518743.1
- ProteinModelPortal:   B0CFX9
- SMR:   B0CFX9
- GeneID:   5683251
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_4449
- HOGENOM:   HBG750208
- OMA:   AYPFWAQ
- ProtClustDB:   PRK02693
- BioCyc:   AMAR329726:AM1_4449-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_00610
- InterPro:   IPR002325
- InterPro:   IPR011054
- Gene3D:   G3DSA:2.60.40.830
- PRINTS:   PR00610

Pfam domain/function: PF01333 Apocytochr_F_C; SSF49441 Apocyt_F; SSF51246 Rudmnt_hyb_motif

EC number: NA

Molecular weight: Translated: 33604; Mature: 33604

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS51010 CYTF

Important sites: BINDING 57-57 BINDING 60-60

Signals:

None

Transmembrane regions:

HASH(0x12220adc)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSLLSVLTKKSLRLLAALFLVVTSVFSLPQAAQAFPIYAQQAYDSPREANGRIVCANC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCCCEEEEEEC
HLAAKPTQVEVPQAVLPDTVFEAVIKIPYDTDAQQVLGSGDLGPLNVGAVLMLPDGFQIA
EEECCCCCCCCCHHHCCHHHHHHHEECCCCCCHHHHHCCCCCCCCCCCEEEECCCCCEEC
PDDRIPEKMKEEINGVFYQKYKPDTDNVIVVGPLSGADHQEIIFPVLSPDPATDPNIHFG
CCCCCCHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEC
KYSVHAGGNRGRGQIYPTGDKTNVNAVTSPAAGLVSSVSENSVTITTNDGQTVTESIPAG
EEEEECCCCCCCCCEEECCCCCCCCEECCCHHHHHHHCCCCEEEEEECCCCEEHHHCCCC
LEVVVSEGQAVADGAPLSSDPNVGGFGQKDTEIVLQSGTRIKWLMVFFSAIMISQTLLVL
EEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
KKKQVEKVQAAEMNF
HHHHHHHHHHHCCCH
>Mature Secondary Structure
MKQSLLSVLTKKSLRLLAALFLVVTSVFSLPQAAQAFPIYAQQAYDSPREANGRIVCANC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCCCEEEEEEC
HLAAKPTQVEVPQAVLPDTVFEAVIKIPYDTDAQQVLGSGDLGPLNVGAVLMLPDGFQIA
EEECCCCCCCCCHHHCCHHHHHHHEECCCCCCHHHHHCCCCCCCCCCCEEEECCCCCEEC
PDDRIPEKMKEEINGVFYQKYKPDTDNVIVVGPLSGADHQEIIFPVLSPDPATDPNIHFG
CCCCCCHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEC
KYSVHAGGNRGRGQIYPTGDKTNVNAVTSPAAGLVSSVSENSVTITTNDGQTVTESIPAG
EEEEECCCCCCCCCEEECCCCCCCCEECCCHHHHHHHCCCCEEEEEECCCCEEHHHCCCC
LEVVVSEGQAVADGAPLSSDPNVGGFGQKDTEIVLQSGTRIKWLMVFFSAIMISQTLLVL
EEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
KKKQVEKVQAAEMNF
HHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA