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The map label for this gene is msrB [H]

Identifier: 158337565

GI number: 158337565

Start: 4475322

End: 4475825

Strand: Reverse

Name: msrB [H]

Synonym: AM1_4446

Alternate gene names: 158337565

Gene position: 4475825-4475322 (Counterclockwise)

Preceding gene: 158337567

Following gene: 158337563

Centisome position: 68.82

GC content: 47.02

Gene sequence:

>504_bases
ATGAAAAGAAGAGCCTTACTGAAGGTAGGAACAGTAGTTATGGGAACAACAGGGTTTTCGAGTTTTTTACCCAAGTGGTT
ATCTGGCAAGGCGATGGCTGCTGAAGTATTTGAAGTCACTAAAACAGAAGAAGAGTGGCGCCAAACTCTCACTCCTGAGC
AGTTCCATGTTCTGCGAGAGAAAGGAACAGAACGTCCCCGGAGTAGCCTGTTAGATAAGGAATATGGCGAGGGGCTTTAT
CGTTGTTCAGGGTGTGATTTACCTCTGTTTACCTCTGCAACTAAGTTTGACAGCGGGACAGGCTGGCCCAGCTTTTATGC
ACCTATCAAAGGAGCGGTAGACACTTCAACGGATTATGTTCTGGTGTTGCCTCGTACTGAGGTTCACTGTCGTCGCTGTG
GTGGACACTTAGGTCATGTTTTTAATGATGGGCCTAGGCCGACTGGAAAACGCTATTGTATGAACGGCGTATCTCTAAAG
TTTGTGCCAGGGGAATCGACTTAA

Upstream 100 bases:

>100_bases
AATATCTAGACCAGTGTTAGGAGGATTTCGTTTATCCTGAAAAATGGGTCGAGTCGTTGTTTTAGGACGGGCTGTGACAC
ATTAGTTCAGAGATCGAATT

Downstream 100 bases:

>100_bases
AATCTCAGATACTTTCAAATTCCTGAGAGAAAATTTAGAGCTACCATTCTTACGTGTGTCGATCCTTATAAATACTTTGT
ACGACTATCAAGTTTTCAGC

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKRRALLKVGTVVMGTTGFSSFLPKWLSGKAMAAEVFEVTKTEEEWRQTLTPEQFHVLREKGTERPRSSLLDKEYGEGLY
RCSGCDLPLFTSATKFDSGTGWPSFYAPIKGAVDTSTDYVLVLPRTEVHCRRCGGHLGHVFNDGPRPTGKRYCMNGVSLK
FVPGEST

Sequences:

>Translated_167_residues
MKRRALLKVGTVVMGTTGFSSFLPKWLSGKAMAAEVFEVTKTEEEWRQTLTPEQFHVLREKGTERPRSSLLDKEYGEGLY
RCSGCDLPLFTSATKFDSGTGWPSFYAPIKGAVDTSTDYVLVLPRTEVHCRRCGGHLGHVFNDGPRPTGKRYCMNGVSLK
FVPGEST
>Mature_167_residues
MKRRALLKVGTVVMGTTGFSSFLPKWLSGKAMAAEVFEVTKTEEEWRQTLTPEQFHVLREKGTERPRSSLLDKEYGEGLY
RCSGCDLPLFTSATKFDSGTGWPSFYAPIKGAVDTSTDYVLVLPRTEVHCRRCGGHLGHVFNDGPRPTGKRYCMNGVSLK
FVPGEST

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=141, Percent_Identity=45.3900709219858, Blast_Score=136, Evalue=1e-32,
Organism=Homo sapiens, GI301336162, Length=141, Percent_Identity=45.3900709219858, Blast_Score=136, Evalue=1e-32,
Organism=Homo sapiens, GI73089054, Length=141, Percent_Identity=45.3900709219858, Blast_Score=136, Evalue=1e-32,
Organism=Homo sapiens, GI37620216, Length=141, Percent_Identity=45.3900709219858, Blast_Score=135, Evalue=2e-32,
Organism=Homo sapiens, GI117606353, Length=134, Percent_Identity=48.5074626865672, Blast_Score=125, Evalue=2e-29,
Organism=Escherichia coli, GI1788077, Length=126, Percent_Identity=46.031746031746, Blast_Score=122, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17553450, Length=122, Percent_Identity=40.9836065573771, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI115532676, Length=120, Percent_Identity=41.6666666666667, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6319816, Length=143, Percent_Identity=40.5594405594406, Blast_Score=109, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24645799, Length=171, Percent_Identity=41.5204678362573, Blast_Score=129, Evalue=1e-30,
Organism=Drosophila melanogaster, GI45553335, Length=132, Percent_Identity=48.4848484848485, Blast_Score=128, Evalue=2e-30,
Organism=Drosophila melanogaster, GI21356369, Length=132, Percent_Identity=48.4848484848485, Blast_Score=128, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24645801, Length=156, Percent_Identity=44.8717948717949, Blast_Score=127, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24645804, Length=141, Percent_Identity=46.0992907801418, Blast_Score=125, Evalue=9e-30,
Organism=Drosophila melanogaster, GI221378664, Length=133, Percent_Identity=45.8646616541353, Blast_Score=124, Evalue=4e-29,
Organism=Drosophila melanogaster, GI221378662, Length=140, Percent_Identity=45, Blast_Score=122, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 18572; Mature: 18572

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRALLKVGTVVMGTTGFSSFLPKWLSGKAMAAEVFEVTKTEEEWRQTLTPEQFHVLRE
CCCCHHEECCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH
KGTERPRSSLLDKEYGEGLYRCSGCDLPLFTSATKFDSGTGWPSFYAPIKGAVDTSTDYV
HCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEE
LVLPRTEVHCRRCGGHLGHVFNDGPRPTGKRYCMNGVSLKFVPGEST
EEECCCHHHHHHHCCHHCCCCCCCCCCCCHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MKRRALLKVGTVVMGTTGFSSFLPKWLSGKAMAAEVFEVTKTEEEWRQTLTPEQFHVLRE
CCCCHHEECCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH
KGTERPRSSLLDKEYGEGLYRCSGCDLPLFTSATKFDSGTGWPSFYAPIKGAVDTSTDYV
HCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEE
LVLPRTEVHCRRCGGHLGHVFNDGPRPTGKRYCMNGVSLKFVPGEST
EEECCCHHHHHHHCCHHCCCCCCCCCCCCHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA