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The map label for this gene is yccR [C]

Identifier: 158337559

GI number: 158337559

Start: 4468640

End: 4469002

Strand: Reverse

Name: yccR [C]

Synonym: AM1_4440

Alternate gene names: 158337559

Gene position: 4469002-4468640 (Counterclockwise)

Preceding gene: 158337563

Following gene: 158337558

Centisome position: 68.71

GC content: 44.08

Gene sequence:

>363_bases
ATGCCAACATCCTCGACATTTGTCAGTTCAGTATTGGAACGCCTCAACCATCTGGCCCCCGTTTCTGCTCGACCTATGTT
TGGAGGACATGGTCTATACGTGGAAGGGGTGATGTTTGCCTTGATTGCAGATGAACGGATTTATCTCAAAGCGGATGGAG
AAAATCAACCATTTTTTGTTGAAGCAGGTAGCAGACCATTTATCTACGATCGTAAAGAGAAGCCTATGGTGATGTCCTAC
TATCTCTTGCCAATCGACATTTACGAGAATTTAGATGAACTGAAGGTGTGGTTGGACTCTGCCGTAGAAGCTGCTCTTCG
CAATCAAGCGAAGAAGAAGCCTAAATCTAAATTGGCTAAGTAA

Upstream 100 bases:

>100_bases
GAAACCATCGAGCTATTGTTTTGTTCATGCTATGGTTCAACTGAGATTTTAAGCTTGCTCTTCAACCGTATATCTATCCT
TTCGGAGAAAGCACATTTCC

Downstream 100 bases:

>100_bases
TGCTGTCAGAGCACCACATCTAGATTGATGATGAACTGCTACTCAGAGCATTTTTTTATCGCTGTATTGATCAGTGGCAT
TCGGCATCTTTATAAAGGAT

Product: TfoX domain-containing protein

Products: NA

Alternate protein names: TfoX Domain Protein; TfoX-Like Protein; TfoX N-Terminal; DNA Transformation Protein; Phosphoribosyl-AMP Cyclohydrolase; TfoX-Like; Regulator Protein Of Competence-Specific Genes; TfoX N-Terminal Domain Protein; Regulator Of Competence-Specific Genes-Like Protein; Regulator Of Competence-Specific Genes TfoX; TfoX N-Terminal Domain Superfamily; Regulator Of Competence-Specific Gene

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MPTSSTFVSSVLERLNHLAPVSARPMFGGHGLYVEGVMFALIADERIYLKADGENQPFFVEAGSRPFIYDRKEKPMVMSY
YLLPIDIYENLDELKVWLDSAVEAALRNQAKKKPKSKLAK

Sequences:

>Translated_120_residues
MPTSSTFVSSVLERLNHLAPVSARPMFGGHGLYVEGVMFALIADERIYLKADGENQPFFVEAGSRPFIYDRKEKPMVMSY
YLLPIDIYENLDELKVWLDSAVEAALRNQAKKKPKSKLAK
>Mature_119_residues
PTSSTFVSSVLERLNHLAPVSARPMFGGHGLYVEGVMFALIADERIYLKADGENQPFFVEAGSRPFIYDRKEKPMVMSYY
LLPIDIYENLDELKVWLDSAVEAALRNQAKKKPKSKLAK

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13597; Mature: 13466

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSSTFVSSVLERLNHLAPVSARPMFGGHGLYVEGVMFALIADERIYLKADGENQPFFV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCEEEEEECCCCCCEEE
EAGSRPFIYDRKEKPMVMSYYLLPIDIYENLDELKVWLDSAVEAALRNQAKKKPKSKLAK
ECCCCCCEEECCCCCEEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
PTSSTFVSSVLERLNHLAPVSARPMFGGHGLYVEGVMFALIADERIYLKADGENQPFFV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCEEEEEECCCCCCEEE
EAGSRPFIYDRKEKPMVMSYYLLPIDIYENLDELKVWLDSAVEAALRNQAKKKPKSKLAK
ECCCCCCEEECCCCCEEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA