| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is frpC [H]
Identifier: 158337554
GI number: 158337554
Start: 4461971
End: 4464700
Strand: Reverse
Name: frpC [H]
Synonym: AM1_4435
Alternate gene names: 158337554
Gene position: 4464700-4461971 (Counterclockwise)
Preceding gene: 158337555
Following gene: 158337553
Centisome position: 68.65
GC content: 49.23
Gene sequence:
>2730_bases TTGATCATCGGTAATCCTGATCAACCCCGTGGTAGAGGAATTTTTGAGAACCACGCCTCTTTTAATATCAACTTCAATAA GCTGCGAGTCAAAGGGTTTAATGAGGGGTTCAAAATTGAATTTCCCAATCACCACCAAGACTTTATTGCATCCTCCCTCA ACAATAGCTATTTCAGTCGGAATAAATACAATATCTCGGCTATAGGCGGAGCACCCCTTGGTAATGGTACTCGCCCAGAT GATTTTCCCAAAAATTTAAAAATCAACAACACTCGTTTTATTGGTGCAGGTAATAATGCTTTGCCTGTGGCTTTATTCAA TAGCAAGACCATCGGTGGTTTAGCATTGGCGTTTGATGCTGGTGCATCCTACGATACTGACCCCTTAAAGCCTGATGGTC AGGGACTCACCAGGGCTTTAGCGAGTAATGCGATTGCAGCCTACGGTTGGGATTTCAATAATGATGGCAAAATCGATAAA TTTGGGCGGCAAGTCAGCCATCAGTTTAGTCAAGCCGTTACCCTGACAGTGTGGGATAACCAGGGGGCCACTCATACCCT TACGAAAACCTTCAATGTTCAGAGGGCAAACTACCTCAACCCTTTTCAGAACAATGATTTTCGCTCAGGAACTGCATTTG GTGCTGCCTATCGAGGGAATAGTGCAGGTGCTGATTTAAGCTGGTTAGCCACTCCTGGTGTTCGACGAAATGCCTCAATC GGGAACGGTGCAGCAGTGCTATCGTCTCCCAATCACTATGGAACAGGGCTCGCTCAAGTCATATATGACCAACACATCCG CCGAGGAATGCAAACGCTGGGGCTGAAGCTCAAGAATACTGAAGAAAGCGGGAAACTCAACAATGATATTGACATTACCC TCTGGGGGGTTAATGGTCAGTTTGAAAATAGCCTGTATTTAACCTCTGGCCCACAACGAGCAGGGACGTTGCCCATGCAA CGGGTGAAGCTGGCGGACGTTACCCTCGGTGGTACTAATTTTGATTGGCAATCGTTTCGCTGGAATGTTGATCTCAAGCA GGGATATGACTTTCTACTGTTTCAAGTGAATACCCGAGGAACGAAAGATCAGGGAGACTTTGTAGGGCTGGATGATGTGA GGTTGTTTGGCAACGGGATATCCACACCAACGCCTTCTCCCATTCCCAGTGGAGATAACCACTTTTTCCTTGATGGCACG GATGCTAATAACTGGATGCGAGGAAGCGATCGCAACCAGTATATGGAAGGACGGGGTGGGAATGACACGCTTCGTGGTGC AGGTGGCAACGACAGCCTTTATGGTGGCACCGGTAATGATCACTTGCATGGCGAGGTCGGTAACGATGATCTGTATGGGG GAGATGGCAACGACTTACTCGATGGTGGCACTGGCGATGACAAGTTCAATGGCGGCAACGATAATGACACCCTCGTTGGA CAGGATGGCAATGACAACCTCAATGGCGGTGCTGGTCTTGATGTCTTATATGGTGGGGATGGCGATGACACCCTCAATGG CGGTGCAGGAAATGATTCCCTCTGGGGCAGTTCAGGTAACGACAGACTCTATGGTTTAGAAGGCGATGATCGCTTAGACG GAGCCCTAGGTGACGATAACCTAAATGGTGGTGAAGGTAACGATACCCTTGCAGGAGGTGAAGGTAACGATACCCTCTAT GGAGACATTGGCCAAGATCGACTCCTCGGCGCGGATGGCAATGATACGCTCAATGGTGCCGCGGGGGATGATGAGCTGCG AGGGGATGGAGGGGACGATTCTCTCTACGGAGATGTTGGCAATGATTCTCTTTATGGTGGCTCTGGAAGTGACACCTTGA GTGGGGGTAATGATGCTGATTCGTTGATGGGGGGGAATGGCAATGATCACCTCAATGGTGGTGATGGTCAAGATCAACTT TTTGGTAATAGCGGTGACGATACTTTATTTGGTGGGCGTGGTGATGATCAACTACTCAGTTCCTGGGGTAATGATACGCT TTACGGTGCTTTAGGAAATGACACTCTAGAAGGCGACTACGGTGAAGATAGCCTATATGGTTATGAAGGAGATGACCTTA TTCGAGGTGGAATGGGGCGAGACCGGCTATATGGCGAGGCCGGGAATGATGCCCTTTGGGGAGGTAGTGGGGATGATTAC TTAGCCGGTGGCCTTGGTAATGACAGTCATTGGGGTGAAGATGGCAATGACCAAATTTGGGCCGCTGCTGGTAACGATCT TATCTATGGTGGAAAGGGACAAGATTCCCTCGGTGGTGGCGCAGGTAATGATTCCCTCCATGGTGGGGATGGTAATGATC TGCTCTCTTCCCAAGACGGGAATGACTGGCTAATGGGTGATGCTGGCAACGATACCCTCAGAGGTGAAGGGGGTAACGAT ACCCTAACTGGAGGCCGAGGTAATGATTCCGTTGAGGGGGGGCATGGCAATGACTTGCTAATGGGGGTTGATGCAACCCA GACCCAAGCCGGTCGAGGTGAGCAAGACATCCTCACGGCCTGGACTGGTATCAATACCTTTGTATTGGGAGATGCCAGTC AAGCATTCTACAATGATGGCCAAAATAATACATTAGGGGCTGAAGATTATGCCCTGTCAAAGGATTCAAGCAATCTCGTG GGGATAAAATTCAACTCCACGGACAAGCCACTGACTATCGGTTGGGGGCAGCTCCGGCGGGTATGCAATCAGGAACAGCC ATTTTCTTAA
Upstream 100 bases:
>100_bases CATAATTTACGCTCCACCATTGATGACTTTATAAGTATGGGGAGTTCGGGGCACAGGGGTGAAAGTTCAGTACAGCTCCT ACACGGATATCAAAAATGGC
Downstream 100 bases:
>100_bases ATACCCCAGGAACAACGGATGAACTGGTTGCGATTGTGGCCTATAACAATAACTTGACCTTAAACAGTAGTGCTCGACCA CACTGAATTGGATAGGTAAG
Product: hemolysin-type calcium-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 909; Mature: 909
Protein sequence:
>909_residues MIIGNPDQPRGRGIFENHASFNINFNKLRVKGFNEGFKIEFPNHHQDFIASSLNNSYFSRNKYNISAIGGAPLGNGTRPD DFPKNLKINNTRFIGAGNNALPVALFNSKTIGGLALAFDAGASYDTDPLKPDGQGLTRALASNAIAAYGWDFNNDGKIDK FGRQVSHQFSQAVTLTVWDNQGATHTLTKTFNVQRANYLNPFQNNDFRSGTAFGAAYRGNSAGADLSWLATPGVRRNASI GNGAAVLSSPNHYGTGLAQVIYDQHIRRGMQTLGLKLKNTEESGKLNNDIDITLWGVNGQFENSLYLTSGPQRAGTLPMQ RVKLADVTLGGTNFDWQSFRWNVDLKQGYDFLLFQVNTRGTKDQGDFVGLDDVRLFGNGISTPTPSPIPSGDNHFFLDGT DANNWMRGSDRNQYMEGRGGNDTLRGAGGNDSLYGGTGNDHLHGEVGNDDLYGGDGNDLLDGGTGDDKFNGGNDNDTLVG QDGNDNLNGGAGLDVLYGGDGDDTLNGGAGNDSLWGSSGNDRLYGLEGDDRLDGALGDDNLNGGEGNDTLAGGEGNDTLY GDIGQDRLLGADGNDTLNGAAGDDELRGDGGDDSLYGDVGNDSLYGGSGSDTLSGGNDADSLMGGNGNDHLNGGDGQDQL FGNSGDDTLFGGRGDDQLLSSWGNDTLYGALGNDTLEGDYGEDSLYGYEGDDLIRGGMGRDRLYGEAGNDALWGGSGDDY LAGGLGNDSHWGEDGNDQIWAAAGNDLIYGGKGQDSLGGGAGNDSLHGGDGNDLLSSQDGNDWLMGDAGNDTLRGEGGND TLTGGRGNDSVEGGHGNDLLMGVDATQTQAGRGEQDILTAWTGINTFVLGDASQAFYNDGQNNTLGAEDYALSKDSSNLV GIKFNSTDKPLTIGWGQLRRVCNQEQPFS
Sequences:
>Translated_909_residues MIIGNPDQPRGRGIFENHASFNINFNKLRVKGFNEGFKIEFPNHHQDFIASSLNNSYFSRNKYNISAIGGAPLGNGTRPD DFPKNLKINNTRFIGAGNNALPVALFNSKTIGGLALAFDAGASYDTDPLKPDGQGLTRALASNAIAAYGWDFNNDGKIDK FGRQVSHQFSQAVTLTVWDNQGATHTLTKTFNVQRANYLNPFQNNDFRSGTAFGAAYRGNSAGADLSWLATPGVRRNASI GNGAAVLSSPNHYGTGLAQVIYDQHIRRGMQTLGLKLKNTEESGKLNNDIDITLWGVNGQFENSLYLTSGPQRAGTLPMQ RVKLADVTLGGTNFDWQSFRWNVDLKQGYDFLLFQVNTRGTKDQGDFVGLDDVRLFGNGISTPTPSPIPSGDNHFFLDGT DANNWMRGSDRNQYMEGRGGNDTLRGAGGNDSLYGGTGNDHLHGEVGNDDLYGGDGNDLLDGGTGDDKFNGGNDNDTLVG QDGNDNLNGGAGLDVLYGGDGDDTLNGGAGNDSLWGSSGNDRLYGLEGDDRLDGALGDDNLNGGEGNDTLAGGEGNDTLY GDIGQDRLLGADGNDTLNGAAGDDELRGDGGDDSLYGDVGNDSLYGGSGSDTLSGGNDADSLMGGNGNDHLNGGDGQDQL FGNSGDDTLFGGRGDDQLLSSWGNDTLYGALGNDTLEGDYGEDSLYGYEGDDLIRGGMGRDRLYGEAGNDALWGGSGDDY LAGGLGNDSHWGEDGNDQIWAAAGNDLIYGGKGQDSLGGGAGNDSLHGGDGNDLLSSQDGNDWLMGDAGNDTLRGEGGND TLTGGRGNDSVEGGHGNDLLMGVDATQTQAGRGEQDILTAWTGINTFVLGDASQAFYNDGQNNTLGAEDYALSKDSSNLV GIKFNSTDKPLTIGWGQLRRVCNQEQPFS >Mature_909_residues MIIGNPDQPRGRGIFENHASFNINFNKLRVKGFNEGFKIEFPNHHQDFIASSLNNSYFSRNKYNISAIGGAPLGNGTRPD DFPKNLKINNTRFIGAGNNALPVALFNSKTIGGLALAFDAGASYDTDPLKPDGQGLTRALASNAIAAYGWDFNNDGKIDK FGRQVSHQFSQAVTLTVWDNQGATHTLTKTFNVQRANYLNPFQNNDFRSGTAFGAAYRGNSAGADLSWLATPGVRRNASI GNGAAVLSSPNHYGTGLAQVIYDQHIRRGMQTLGLKLKNTEESGKLNNDIDITLWGVNGQFENSLYLTSGPQRAGTLPMQ RVKLADVTLGGTNFDWQSFRWNVDLKQGYDFLLFQVNTRGTKDQGDFVGLDDVRLFGNGISTPTPSPIPSGDNHFFLDGT DANNWMRGSDRNQYMEGRGGNDTLRGAGGNDSLYGGTGNDHLHGEVGNDDLYGGDGNDLLDGGTGDDKFNGGNDNDTLVG QDGNDNLNGGAGLDVLYGGDGDDTLNGGAGNDSLWGSSGNDRLYGLEGDDRLDGALGDDNLNGGEGNDTLAGGEGNDTLY GDIGQDRLLGADGNDTLNGAAGDDELRGDGGDDSLYGDVGNDSLYGGSGSDTLSGGNDADSLMGGNGNDHLNGGDGQDQL FGNSGDDTLFGGRGDDQLLSSWGNDTLYGALGNDTLEGDYGEDSLYGYEGDDLIRGGMGRDRLYGEAGNDALWGGSGDDY LAGGLGNDSHWGEDGNDQIWAAAGNDLIYGGKGQDSLGGGAGNDSLHGGDGNDLLSSQDGNDWLMGDAGNDTLRGEGGND TLTGGRGNDSVEGGHGNDLLMGVDATQTQAGRGEQDILTAWTGINTFVLGDASQAFYNDGQNNTLGAEDYALSKDSSNLV GIKFNSTDKPLTIGWGQLRRVCNQEQPFS
Specific function: May participate in the pathogenesis of meningococcal disease [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein. Secreted (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 22 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010566 - InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR003995 - InterPro: IPR011049 [H]
Pfam domain/function: PF06594 HCBP_related; PF00353 HemolysinCabind [H]
EC number: NA
Molecular weight: Translated: 95614; Mature: 95614
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: PS00330 HEMOLYSIN_CALCIUM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGNPDQPRGRGIFENHASFNINFNKLRVKGFNEGFKIEFPNHHQDFIASSLNNSYFSR CCCCCCCCCCCCCEECCCCEEEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHCCCHHCC NKYNISAIGGAPLGNGTRPDDFPKNLKINNTRFIGAGNNALPVALFNSKTIGGLALAFDA CCEEEEEECCCCCCCCCCCCCCCCCEEECCEEEEECCCCCEEEEEECCCCCCCEEEEEEC GASYDTDPLKPDGQGLTRALASNAIAAYGWDFNNDGKIDKFGRQVSHQFSQAVTLTVWDN CCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEEECC QGATHTLTKTFNVQRANYLNPFQNNDFRSGTAFGAAYRGNSAGADLSWLATPGVRRNASI CCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCC GNGAAVLSSPNHYGTGLAQVIYDQHIRRGMQTLGLKLKNTEESGKLNNDIDITLWGVNGQ CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCEEEEEEECCCC FENSLYLTSGPQRAGTLPMQRVKLADVTLGGTNFDWQSFRWNVDLKQGYDFLLFQVNTRG CCCEEEEECCCCCCCCCCHHEEEEEEEEECCCCCCCCCEEEEEEHHCCCEEEEEEEECCC TKDQGDFVGLDDVRLFGNGISTPTPSPIPSGDNHFFLDGTDANNWMRGSDRNQYMEGRGG CCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCC NDTLRGAGGNDSLYGGTGNDHLHGEVGNDDLYGGDGNDLLDGGTGDDKFNGGNDNDTLVG CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE QDGNDNLNGGAGLDVLYGGDGDDTLNGGAGNDSLWGSSGNDRLYGLEGDDRLDGALGDDN CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC LNGGEGNDTLAGGEGNDTLYGDIGQDRLLGADGNDTLNGAAGDDELRGDGGDDSLYGDVG CCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCC NDSLYGGSGSDTLSGGNDADSLMGGNGNDHLNGGDGQDQLFGNSGDDTLFGGRGDDQLLS CCCEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCHHHHH SWGNDTLYGALGNDTLEGDYGEDSLYGYEGDDLIRGGMGRDRLYGEAGNDALWGGSGDDY HCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHCCCCCCCCCEECCCCCCE LAGGLGNDSHWGEDGNDQIWAAAGNDLIYGGKGQDSLGGGAGNDSLHGGDGNDLLSSQDG EECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDWLMGDAGNDTLRGEGGNDTLTGGRGNDSVEGGHGNDLLMGVDATQTQAGRGEQDILTA CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHEEEE WTGINTFVLGDASQAFYNDGQNNTLGAEDYALSKDSSNLVGIKFNSTDKPLTIGWGQLRR ECCCEEEEECCCHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCEEECHHHHHH VCNQEQPFS HHCCCCCCC >Mature Secondary Structure MIIGNPDQPRGRGIFENHASFNINFNKLRVKGFNEGFKIEFPNHHQDFIASSLNNSYFSR CCCCCCCCCCCCCEECCCCEEEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHCCCHHCC NKYNISAIGGAPLGNGTRPDDFPKNLKINNTRFIGAGNNALPVALFNSKTIGGLALAFDA CCEEEEEECCCCCCCCCCCCCCCCCEEECCEEEEECCCCCEEEEEECCCCCCCEEEEEEC GASYDTDPLKPDGQGLTRALASNAIAAYGWDFNNDGKIDKFGRQVSHQFSQAVTLTVWDN CCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEEECC QGATHTLTKTFNVQRANYLNPFQNNDFRSGTAFGAAYRGNSAGADLSWLATPGVRRNASI CCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCC GNGAAVLSSPNHYGTGLAQVIYDQHIRRGMQTLGLKLKNTEESGKLNNDIDITLWGVNGQ CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCEEEEEEECCCC FENSLYLTSGPQRAGTLPMQRVKLADVTLGGTNFDWQSFRWNVDLKQGYDFLLFQVNTRG CCCEEEEECCCCCCCCCCHHEEEEEEEEECCCCCCCCCEEEEEEHHCCCEEEEEEEECCC TKDQGDFVGLDDVRLFGNGISTPTPSPIPSGDNHFFLDGTDANNWMRGSDRNQYMEGRGG CCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCC NDTLRGAGGNDSLYGGTGNDHLHGEVGNDDLYGGDGNDLLDGGTGDDKFNGGNDNDTLVG CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE QDGNDNLNGGAGLDVLYGGDGDDTLNGGAGNDSLWGSSGNDRLYGLEGDDRLDGALGDDN CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC LNGGEGNDTLAGGEGNDTLYGDIGQDRLLGADGNDTLNGAAGDDELRGDGGDDSLYGDVG CCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCC NDSLYGGSGSDTLSGGNDADSLMGGNGNDHLNGGDGQDQLFGNSGDDTLFGGRGDDQLLS CCCEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCHHHHH SWGNDTLYGALGNDTLEGDYGEDSLYGYEGDDLIRGGMGRDRLYGEAGNDALWGGSGDDY HCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHCCCCCCCCCEECCCCCCE LAGGLGNDSHWGEDGNDQIWAAAGNDLIYGGKGQDSLGGGAGNDSLHGGDGNDLLSSQDG EECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDWLMGDAGNDTLRGEGGNDTLTGGRGNDSVEGGHGNDLLMGVDATQTQAGRGEQDILTA CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHEEEE WTGINTFVLGDASQAFYNDGQNNTLGAEDYALSKDSSNLVGIKFNSTDKPLTIGWGQLRR ECCCEEEEECCCHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCEEECHHHHHH VCNQEQPFS HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]