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The map label for this gene is yomI [H]

Identifier: 158337513

GI number: 158337513

Start: 4422834

End: 4423436

Strand: Direct

Name: yomI [H]

Synonym: AM1_4392

Alternate gene names: 158337513

Gene position: 4422834-4423436 (Clockwise)

Preceding gene: 158337511

Following gene: 158337519

Centisome position: 68.0

GC content: 50.91

Gene sequence:

>603_bases
ATGAAACGCAACCGCTGGTTATTCGCCGTTGGTGCAAGTGTCGTTGGATTAAATGTATTAGCAGCCATGGGGCCAAAAGC
TGTAGGTAATCAGCCCCCTCAAGTTGCAGTGGGTACTTCTATCTGGCGCAATGGCTCTTTTCCGGTGGAAAATTTCCAGG
GATATACATCTCCATTTGGCTATCGCTCATCGCCAACGGGCGGTTATTCAACAGAATTTCATACCGGCCTTGATTTTGCA
GCGCCCAATGGTAGCTATATTCGTAACTGGTGGTCTGGACGAGTGATCAGAGTGTCAGACAATACGGCTTGTGGCACTTC
TGTTCGTGTGCAGTCTGGCTCTTGGGTCCATGTCTATTGCCATATGAAAGGCTATGTTGCCAGAGATAGCAGAGGCCCTT
ATGTCGTTGATGGTGGATTGCGGATTCGCCAAGGACAAACGGTAAAAGCTGGCCAACGCATTGGTCGGGTTGGTATGACC
GGACGGACGACGGGTCCCCACCTTCACTGGACGCTCAAATACCAAGGCAAGCTTGTGGATCCAGCTGCCGTACTTCGAGC
GATGCATCGTGCTCAGCGAGGCTCTATTAGTCAAAAGCTGTAG

Upstream 100 bases:

>100_bases
ATGACGCTATAAGAGAGTTCATGTTTTCTTTATTGTTATTGTTCGTTATTAGGCCATTGCCGGTTGGGCAAGTTGGGGTC
ATTTGCAAAGGAGTTCCGCA

Downstream 100 bases:

>100_bases
TAAGCAGCCCGCTTAGCATAAGCGAGGTTCTAAACCGACTGAATCAATAACCCAGCAGAACCACTCTGCTGGGTTATTTG
TCTATTTTTCTAAACGAACA

Product: peptidase M23 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKRNRWLFAVGASVVGLNVLAAMGPKAVGNQPPQVAVGTSIWRNGSFPVENFQGYTSPFGYRSSPTGGYSTEFHTGLDFA
APNGSYIRNWWSGRVIRVSDNTACGTSVRVQSGSWVHVYCHMKGYVARDSRGPYVVDGGLRIRQGQTVKAGQRIGRVGMT
GRTTGPHLHWTLKYQGKLVDPAAVLRAMHRAQRGSISQKL

Sequences:

>Translated_200_residues
MKRNRWLFAVGASVVGLNVLAAMGPKAVGNQPPQVAVGTSIWRNGSFPVENFQGYTSPFGYRSSPTGGYSTEFHTGLDFA
APNGSYIRNWWSGRVIRVSDNTACGTSVRVQSGSWVHVYCHMKGYVARDSRGPYVVDGGLRIRQGQTVKAGQRIGRVGMT
GRTTGPHLHWTLKYQGKLVDPAAVLRAMHRAQRGSISQKL
>Mature_200_residues
MKRNRWLFAVGASVVGLNVLAAMGPKAVGNQPPQVAVGTSIWRNGSFPVENFQGYTSPFGYRSSPTGGYSTEFHTGLDFA
APNGSYIRNWWSGRVIRVSDNTACGTSVRVQSGSWVHVYCHMKGYVARDSRGPYVVDGGLRIRQGQTVKAGQRIGRVGMT
GRTTGPHLHWTLKYQGKLVDPAAVLRAMHRAQRGSISQKL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 10 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR008258
- InterPro:   IPR016047
- InterPro:   IPR010090
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01551 Peptidase_M23; PF10145 PhageMin_Tail; PF01464 SLT [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 21822; Mature: 21822

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNRWLFAVGASVVGLNVLAAMGPKAVGNQPPQVAVGTSIWRNGSFPVENFQGYTSPFG
CCCCCEEEEECCHHHHHHHHHHCCCHHCCCCCCCEEECCCEECCCCCCHHCCCCCCCCCC
YRSSPTGGYSTEFHTGLDFAAPNGSYIRNWWSGRVIRVSDNTACGTSVRVQSGSWVHVYC
CCCCCCCCCCCCCCCCCCEECCCCHHEEHCCCCEEEEEECCCCCCCEEEECCCCEEEEEE
HMKGYVARDSRGPYVVDGGLRIRQGQTVKAGQRIGRVGMTGRTTGPHLHWTLKYQGKLVD
EEEEEEEECCCCCEEEECCEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCEEEC
PAAVLRAMHRAQRGSISQKL
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRNRWLFAVGASVVGLNVLAAMGPKAVGNQPPQVAVGTSIWRNGSFPVENFQGYTSPFG
CCCCCEEEEECCHHHHHHHHHHCCCHHCCCCCCCEEECCCEECCCCCCHHCCCCCCCCCC
YRSSPTGGYSTEFHTGLDFAAPNGSYIRNWWSGRVIRVSDNTACGTSVRVQSGSWVHVYC
CCCCCCCCCCCCCCCCCCEECCCCHHEEHCCCCEEEEEECCCCCCCEEEECCCCEEEEEE
HMKGYVARDSRGPYVVDGGLRIRQGQTVKAGQRIGRVGMTGRTTGPHLHWTLKYQGKLVD
EEEEEEEECCCCCEEEECCEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCEEEC
PAAVLRAMHRAQRGSISQKL
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]