Click here to switch to the map view.

The map label for this gene is yjeA [H]

Identifier: 158337498

GI number: 158337498

Start: 4408598

End: 4409473

Strand: Reverse

Name: yjeA [H]

Synonym: AM1_4377

Alternate gene names: 158337498

Gene position: 4409473-4408598 (Counterclockwise)

Preceding gene: 158337500

Following gene: 158337497

Centisome position: 67.8

GC content: 45.66

Gene sequence:

>876_bases
ATGTTTGGGAAAAATTTAAGAGTTCGTGTCGTCAATCGACAGTATGCATGGTTGGCGGCAGCATGCCTATGCTTAGGGGT
TAGCTCGATTGCTATTCAAGCAAATTTGAATCAGATTGCCGTTGGGGGATTACCAGAGGAGGTCAGTCTCTCAGAAGAGA
GTCCTTGGCTAACGGATACTGACTCTGGATTTCGTACTGCTCTAAAGACAATCGATGACATTGATCTAAAACAGCGGCGT
CATTATCACCCGCCAACCAAGTTTCAGGGAGTAACCATTAATGGCGTAAAACTACCTTCTGATCAAAAAGTCATTGCTCT
CACGTTTGATGATGGCCCTTGGCCCAAAACCACGGCCAAAATGCTAGACATCCTCAAAGAGCATCAAGTAGAAGCGACAT
TTTTCGTGGTCGGTAGTAATATTACCCGATTTCCAAAATTACTCCAGCGAGTCGCAAAGGAAGGTCACGCCATTGGTAAC
CATAGCTGGAACCATCAATACTATTACCATCACCCCGCTTTGGCCCAAAAAGAGATCCAGCGGACTGCCGAGATTATTGA
AAAATATACAGGCTTCAAAACAAAACTGTTTCGGCCACCGGGAGGGTATCTCCACAACGGTCTAGTAGCCCACGCTCGTT
CCCAAAAACATGTCACTTTGATGTGGACCGTGGATGATACCTATACAGGCACAGTTGATAAGGTCATCAACAATGTTCTC
AATAATGCCTCCCCTGGAGGGATTGTCTTGATGCATGATGGCGGCGATAATCGCCAGCTGATGATCCAAGCCCTGCCTCA
TATCATTACTCGTCTCAGACAGCAGGGGTATAAACTTGTCACCATTCCCCAATTGTTGGAATTAGCAAAAAACTAA

Upstream 100 bases:

>100_bases
AACGCCAGCCACATTGAACTTTCAAGTCTTGCCTGTCTAGTTCTCTCTGACGATTTACCAATGGTTTGGCTTTATCTAAG
GGTTTGCGGTTAATCAAGTA

Downstream 100 bases:

>100_bases
CTAGAACCCCGGACAGTCGCCACCACTTAAAAGGTCTCCCGTTGCCCAGGCTATTGCTGGTCGAGTCAGAGTAGATTGAT
ATACTACGCTCACACCGCAA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MFGKNLRVRVVNRQYAWLAAACLCLGVSSIAIQANLNQIAVGGLPEEVSLSEESPWLTDTDSGFRTALKTIDDIDLKQRR
HYHPPTKFQGVTINGVKLPSDQKVIALTFDDGPWPKTTAKMLDILKEHQVEATFFVVGSNITRFPKLLQRVAKEGHAIGN
HSWNHQYYYHHPALAQKEIQRTAEIIEKYTGFKTKLFRPPGGYLHNGLVAHARSQKHVTLMWTVDDTYTGTVDKVINNVL
NNASPGGIVLMHDGGDNRQLMIQALPHIITRLRQQGYKLVTIPQLLELAKN

Sequences:

>Translated_291_residues
MFGKNLRVRVVNRQYAWLAAACLCLGVSSIAIQANLNQIAVGGLPEEVSLSEESPWLTDTDSGFRTALKTIDDIDLKQRR
HYHPPTKFQGVTINGVKLPSDQKVIALTFDDGPWPKTTAKMLDILKEHQVEATFFVVGSNITRFPKLLQRVAKEGHAIGN
HSWNHQYYYHHPALAQKEIQRTAEIIEKYTGFKTKLFRPPGGYLHNGLVAHARSQKHVTLMWTVDDTYTGTVDKVINNVL
NNASPGGIVLMHDGGDNRQLMIQALPHIITRLRQQGYKLVTIPQLLELAKN
>Mature_291_residues
MFGKNLRVRVVNRQYAWLAAACLCLGVSSIAIQANLNQIAVGGLPEEVSLSEESPWLTDTDSGFRTALKTIDDIDLKQRR
HYHPPTKFQGVTINGVKLPSDQKVIALTFDDGPWPKTTAKMLDILKEHQVEATFFVVGSNITRFPKLLQRVAKEGHAIGN
HSWNHQYYYHHPALAQKEIQRTAEIIEKYTGFKTKLFRPPGGYLHNGLVAHARSQKHVTLMWTVDDTYTGTVDKVINNVL
NNASPGGIVLMHDGGDNRQLMIQALPHIITRLRQQGYKLVTIPQLLELAKN

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=164, Percent_Identity=36.5853658536585, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6323338, Length=164, Percent_Identity=28.0487804878049, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 32689; Mature: 32689

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKNLRVRVVNRQYAWLAAACLCLGVSSIAIQANLNQIAVGGLPEEVSLSEESPWLTDT
CCCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCCCCCCCCCCCCC
DSGFRTALKTIDDIDLKQRRHYHPPTKFQGVTINGVKLPSDQKVIALTFDDGPWPKTTAK
CCHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEECEECCCCCEEEEEEECCCCCCHHHHH
MLDILKEHQVEATFFVVGSNITRFPKLLQRVAKEGHAIGNHSWNHQYYYHHPALAQKEIQ
HHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHH
RTAEIIEKYTGFKTKLFRPPGGYLHNGLVAHARSQKHVTLMWTVDDTYTGTVDKVINNVL
HHHHHHHHHCCCCEEEECCCCCHHHCCHHEECCCCCEEEEEEEECCCCCCCHHHHHHHHH
NNASPGGIVLMHDGGDNRQLMIQALPHIITRLRQQGYKLVTIPQLLELAKN
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCC
>Mature Secondary Structure
MFGKNLRVRVVNRQYAWLAAACLCLGVSSIAIQANLNQIAVGGLPEEVSLSEESPWLTDT
CCCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCCCCCCCCCCCCC
DSGFRTALKTIDDIDLKQRRHYHPPTKFQGVTINGVKLPSDQKVIALTFDDGPWPKTTAK
CCHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEECEECCCCCEEEEEEECCCCCCHHHHH
MLDILKEHQVEATFFVVGSNITRFPKLLQRVAKEGHAIGNHSWNHQYYYHHPALAQKEIQ
HHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHH
RTAEIIEKYTGFKTKLFRPPGGYLHNGLVAHARSQKHVTLMWTVDDTYTGTVDKVINNVL
HHHHHHHHHCCCCEEEECCCCCHHHCCHHEECCCCCEEEEEEEECCCCCCCHHHHHHHHH
NNASPGGIVLMHDGGDNRQLMIQALPHIITRLRQQGYKLVTIPQLLELAKN
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]