Click here to switch to the map view.

The map label for this gene is ywjB [H]

Identifier: 158337465

GI number: 158337465

Start: 4373916

End: 4374461

Strand: Direct

Name: ywjB [H]

Synonym: AM1_4344

Alternate gene names: 158337465

Gene position: 4373916-4374461 (Clockwise)

Preceding gene: 158337464

Following gene: 158337466

Centisome position: 67.25

GC content: 44.87

Gene sequence:

>546_bases
ATGCGGAAACTAAAGTACTATATTGCATCCACGATTGATGGTTTTATTGCCCATGAAGATGGTTCTTTTGATGGCTTTTT
GATGGAAGGAGAGCATGTCTCAGATTATTTAGCGGCTTTGCAGCAGTTTGATGCTGTGTTGATGGGACGGAAAACTTATG
AAGTGGGTGTCAAAGAGGGAGTCACCAATCCCTACCCGCATATGAAACAGTTTGTCATTTCTCGAACGTTACCCACTAGT
CCAGATGAAGCTGTGACCGTGGTTGCGGATGAGTTGAATGACTTGGTCCGCAATCTGAAAGCGGAATCTGGCCAGGACAT
CTATCTCTGCGGTGGTGGAGAGTTGGCTAAAACGCTGTTAGCGGCTCAACATATCGATGAAATTATTCTCAAAGTGAATC
CAGTCTTATTTGGCACCGGAATTCCTTTATTTGCAAGTGGCCAACCCTCTATTCCCACTACTCGTCTGCAGCTAACGGAT
CACAATATCTACGGCAATGGGCTAGTGTTGTTGTTCTATAACGTCCTTTACGATGCAGCGAATTGA

Upstream 100 bases:

>100_bases
CTATCAATCTGGTGCGGATTATCATGTTTTGCTGCATGGACTTGTCGTTTCCTTTGATCAGTGTCTAGATTCAGGACGCA
AGGGTATGACAAGGTCACTT

Downstream 100 bases:

>100_bases
AGTAAAGCGATGACGCTATGGCTCTCAACATGGACGAGTAAGCGTTGGGCTTTTGAAAAGTTCTTTGGCATTCCTGGTAC
TAAGGCTGAGATTTTCTTGG

Product: riboflavin biosynthesis protein RibD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRKLKYYIASTIDGFIAHEDGSFDGFLMEGEHVSDYLAALQQFDAVLMGRKTYEVGVKEGVTNPYPHMKQFVISRTLPTS
PDEAVTVVADELNDLVRNLKAESGQDIYLCGGGELAKTLLAAQHIDEIILKVNPVLFGTGIPLFASGQPSIPTTRLQLTD
HNIYGNGLVLLFYNVLYDAAN

Sequences:

>Translated_181_residues
MRKLKYYIASTIDGFIAHEDGSFDGFLMEGEHVSDYLAALQQFDAVLMGRKTYEVGVKEGVTNPYPHMKQFVISRTLPTS
PDEAVTVVADELNDLVRNLKAESGQDIYLCGGGELAKTLLAAQHIDEIILKVNPVLFGTGIPLFASGQPSIPTTRLQLTD
HNIYGNGLVLLFYNVLYDAAN
>Mature_181_residues
MRKLKYYIASTIDGFIAHEDGSFDGFLMEGEHVSDYLAALQQFDAVLMGRKTYEVGVKEGVTNPYPHMKQFVISRTLPTS
PDEAVTVVADELNDLVRNLKAESGQDIYLCGGGELAKTLLAAQHIDEIILKVNPVLFGTGIPLFASGQPSIPTTRLQLTD
HNIYGNGLVLLFYNVLYDAAN

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 19882; Mature: 19882

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLKYYIASTIDGFIAHEDGSFDGFLMEGEHVSDYLAALQQFDAVLMGRKTYEVGVKEG
CCHHHHHHHHHHHHEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEECHHHCC
VTNPYPHMKQFVISRTLPTSPDEAVTVVADELNDLVRNLKAESGQDIYLCGGGELAKTLL
CCCCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH
AAQHIDEIILKVNPVLFGTGIPLFASGQPSIPTTRLQLTDHNIYGNGLVLLFYNVLYDAA
HHHHHHHHHHHCCCEEEECCCCEEECCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHCC
N
C
>Mature Secondary Structure
MRKLKYYIASTIDGFIAHEDGSFDGFLMEGEHVSDYLAALQQFDAVLMGRKTYEVGVKEG
CCHHHHHHHHHHHHEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEECHHHCC
VTNPYPHMKQFVISRTLPTSPDEAVTVVADELNDLVRNLKAESGQDIYLCGGGELAKTLL
CCCCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH
AAQHIDEIILKVNPVLFGTGIPLFASGQPSIPTTRLQLTDHNIYGNGLVLLFYNVLYDAA
HHHHHHHHHHHCCCEEEECCCCEEECCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]