| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is pqqL [C]
Identifier: 158337463
GI number: 158337463
Start: 4369229
End: 4371910
Strand: Reverse
Name: pqqL [C]
Synonym: AM1_4341
Alternate gene names: 158337463
Gene position: 4371910-4369229 (Counterclockwise)
Preceding gene: 158337473
Following gene: 158337460
Centisome position: 67.22
GC content: 51.83
Gene sequence:
>2682_bases TTGACATCTACCAACGTGACTATTTCTAGTACCCCTGACCTACGACATGTGTTGACCAAAGACGTCAACAAAACAATCCT GGAAAATGGCTTAACAATCTTACTGAAGGAAGTGCATACGGCACCAGTCGTCAGTGTGCAAGTGTGGTATCGAGTGGGTT CCCGAAATGAGGCCTTAGGGCTCAATGGCATCACCCACCAGCTAGAACACTTGATGTTTAAAGGCACCCACTCTCGTCCA GTCCAATTTGGCAAACTCTTCAGTGCCCTGGGCAGTGCCTCCAACGCCTTTACCAGCTATGACATGACCGCCTATTACGG CACCGTGGGTAGCGACAAATTAGAAACCTTACTGATCCTGGAAGCCGACCGGATGCAGAACGTAGCGCTGACGGCTGAAC ATTTAGCCAGTGAAAAGCGTGTTGTGATTTCAGAGCTGCAGGGCTATGAGAATAGTCCCGACTATCGCTTAAGCAAAGCC GTGATGCAGCAGGCTTTTCCGGAGTCCAACTATGGGCTATCCGTTGGGGGAAACAAGTCGGACGTGGAGCAATTTACCCT GGATCAAGTGCAGGAATATTACCAAACCTATTACCAACCGAGTAATGCCACATTGGTGATCACGGGGGATTTTGACGAAA GTACGGTTCTAGAACAAATTCAGACCTACTTTGGTCCCATTCCTAGTCATCCAGTCGCAACGGCCCCTGCCCCCATGTCC GTGGTTACAAAAACGGCCCCTTCAGCACCGATTGTGTTGAAAGAACCTGGCAGTGCCCCTCTGCTGGATGCGGTCTACCC CATCCCTGATGCCCAACACCCAGATATTCCGGCCCTAGAGATTTTGGATTCCATTCTGTCGGCTGGGCGCAATTCACGGT TTTATCCCGCCTTAATTGAGTCTGGCTTAGCCACTAATGCCCATGCCTATGTTGCCTCCCTGATGGATGGAGGTTGGTAC AACATTTCGGTGACCGCTGCTGCAGGGGAACTGTCAGAGATTGATCAGGTGGTAGAGGCAACCCTGGAGCAGCTGCGGAG CCAGCCCATTACTCTTGAAGAGCTGGAACGAGCCAAAACTCAGGTCAAGGCTGGCTTTATTCTCAGTAATCGAGAGATTG AGAATCAGGCGAGCCAGTTGGCCTATAACCAAATTGTCACCAACGATCACTGCTTTAGCGATCGCTATCTGAGGGGGATT GAAGCGGTAACCCCTACCGATGTGCAGCGAGTCGCTCAGACCTATCTCACCCCTACCCAGAGAACAGTTGGCTTATTTGA GCCCACGCAGTTAGAAGGACAACCGATGCCTGCTGGCATTCCTGCTACCCAAACGGCAGAAAACTTTACGCCCAGCGAGC CGGTGGATCCGGCTCAGGTCGCCAAATATCTGCCGGACCTGGCGACCTCCGCTGGCTCCGATACCCAGTCTTTACCGGAG CGGTGGGTTTTAGATAATGGTCTAACGGTGCTGTTACTAGAAGACCACAGTACGCCCACGGTGACCCTGAGTGGCCATAT TCGGGCAGGCAATCAGTGGGACTATCTGACCTTGGGCGGGGTGGCCAGCATGACGGCTGACAACCTGATGAGCGGCACAA CGAGCAAAGATGATCTAGCGATTGCTAAAGCCTTAGAGAATCGCGGGGCCAGTTTAGATTTTCTATCTCTGCGAGAAGGT GTTGATGTCTCTGGCTATGCCTTATCTCCTGACCTCCCCGTGGTGCTAGAGACCTTGGCGGACGTCCTGCAGCATGCGAT CTTCCCTCAACAGCTGTTAGACTTGTCTCGTCAGCGCATGCTGACCCACCTACAGCTAGAGCTAGATGATCCAGGGGCGT TAGCCCGTCGGACCTTTCAGCAAAAAATTTATACCCAAGACCATCCATTTCATGGATTCCCCACAGCCAATAGTCTAAAG AACATCAGTAGAGAAGGGATTTTGCGGTTTTATGAGCAGCATTATCGCCCCGACAATATGATTTTGACCTTGGTGGGAGA TTTTGAGGGTGCGGAGTTGCGATCGCACCTCAAACGAACCCTAGGCCAATGGCAAAATCCCCGGAGTTCTACCGCGCTCA ACTTTCCTGAACCTCAGATGCCTCCTACGATCCAGCGAGTGAATGCGCCTTTACCGGGCAAAACTCAAGTGGTGACCTAT ATGGGCTATCCCGGTATTGAACGCCACCATTCCCTCTACTATGCGGCCATGCTCCTGAACCAAATTATCGGAGGCGATAC GTTATCGAGTCGTTTAGGTACTGAAATTCGCGATCGCAAAGGACTCACCTACGGCATCTACAGCTATTTTGCCGCCGGAC TCCATGCGGGTCCCTTTGCCGTACAGATGCAAACGTCTCCCGAAGATACTCAAACCGCTATTTCCAGTACCCTCGCCTTA CTCAAACAAGTGAAAGCAGAAGGAATTACTCAGTCCGAACTAGAAACAGCCCAGCGCTCCATCCTCAACAGCTATCCCGT TGATCTGGCTGATCCCGATATTCTGGCCCAGCGGTTTTTGATGAATGAAGTCCTGGGCTTACCCATCGAAGAAATCCGTC ACCTTCCCCAACGCATCGGTGCTGTTACCATGGCCGAGATCAATCAGGCCATTGAAGCCTTTATCCATCCTGACCGAATG GTTATTGTGTCTGCTGGTCCCGTGGATGTGATTCGGAGCTAG
Upstream 100 bases:
>100_bases GCCCCCAAATCTTTCCCCTCAACCACAAGCGAAGGAGGTAGGCGATACTAAGATCTGAAGACTATATATTATTCCTGCGG TTTATCCTCTGTTAATCCAT
Downstream 100 bases:
>100_bases CAGTTGGGAGCAGAGGGTTGGAAAGCATAATGGGATGGGCCTTGACGCTGAGTTGTTAACACGGTGCGTCCCTGCTCATC CTGCTGCCAGCCTTGAGCTT
Product: peptidase M16 inactive domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 893; Mature: 892
Protein sequence:
>893_residues MTSTNVTISSTPDLRHVLTKDVNKTILENGLTILLKEVHTAPVVSVQVWYRVGSRNEALGLNGITHQLEHLMFKGTHSRP VQFGKLFSALGSASNAFTSYDMTAYYGTVGSDKLETLLILEADRMQNVALTAEHLASEKRVVISELQGYENSPDYRLSKA VMQQAFPESNYGLSVGGNKSDVEQFTLDQVQEYYQTYYQPSNATLVITGDFDESTVLEQIQTYFGPIPSHPVATAPAPMS VVTKTAPSAPIVLKEPGSAPLLDAVYPIPDAQHPDIPALEILDSILSAGRNSRFYPALIESGLATNAHAYVASLMDGGWY NISVTAAAGELSEIDQVVEATLEQLRSQPITLEELERAKTQVKAGFILSNREIENQASQLAYNQIVTNDHCFSDRYLRGI EAVTPTDVQRVAQTYLTPTQRTVGLFEPTQLEGQPMPAGIPATQTAENFTPSEPVDPAQVAKYLPDLATSAGSDTQSLPE RWVLDNGLTVLLLEDHSTPTVTLSGHIRAGNQWDYLTLGGVASMTADNLMSGTTSKDDLAIAKALENRGASLDFLSLREG VDVSGYALSPDLPVVLETLADVLQHAIFPQQLLDLSRQRMLTHLQLELDDPGALARRTFQQKIYTQDHPFHGFPTANSLK NISREGILRFYEQHYRPDNMILTLVGDFEGAELRSHLKRTLGQWQNPRSSTALNFPEPQMPPTIQRVNAPLPGKTQVVTY MGYPGIERHHSLYYAAMLLNQIIGGDTLSSRLGTEIRDRKGLTYGIYSYFAAGLHAGPFAVQMQTSPEDTQTAISSTLAL LKQVKAEGITQSELETAQRSILNSYPVDLADPDILAQRFLMNEVLGLPIEEIRHLPQRIGAVTMAEINQAIEAFIHPDRM VIVSAGPVDVIRS
Sequences:
>Translated_893_residues MTSTNVTISSTPDLRHVLTKDVNKTILENGLTILLKEVHTAPVVSVQVWYRVGSRNEALGLNGITHQLEHLMFKGTHSRP VQFGKLFSALGSASNAFTSYDMTAYYGTVGSDKLETLLILEADRMQNVALTAEHLASEKRVVISELQGYENSPDYRLSKA VMQQAFPESNYGLSVGGNKSDVEQFTLDQVQEYYQTYYQPSNATLVITGDFDESTVLEQIQTYFGPIPSHPVATAPAPMS VVTKTAPSAPIVLKEPGSAPLLDAVYPIPDAQHPDIPALEILDSILSAGRNSRFYPALIESGLATNAHAYVASLMDGGWY NISVTAAAGELSEIDQVVEATLEQLRSQPITLEELERAKTQVKAGFILSNREIENQASQLAYNQIVTNDHCFSDRYLRGI EAVTPTDVQRVAQTYLTPTQRTVGLFEPTQLEGQPMPAGIPATQTAENFTPSEPVDPAQVAKYLPDLATSAGSDTQSLPE RWVLDNGLTVLLLEDHSTPTVTLSGHIRAGNQWDYLTLGGVASMTADNLMSGTTSKDDLAIAKALENRGASLDFLSLREG VDVSGYALSPDLPVVLETLADVLQHAIFPQQLLDLSRQRMLTHLQLELDDPGALARRTFQQKIYTQDHPFHGFPTANSLK NISREGILRFYEQHYRPDNMILTLVGDFEGAELRSHLKRTLGQWQNPRSSTALNFPEPQMPPTIQRVNAPLPGKTQVVTY MGYPGIERHHSLYYAAMLLNQIIGGDTLSSRLGTEIRDRKGLTYGIYSYFAAGLHAGPFAVQMQTSPEDTQTAISSTLAL LKQVKAEGITQSELETAQRSILNSYPVDLADPDILAQRFLMNEVLGLPIEEIRHLPQRIGAVTMAEINQAIEAFIHPDRM VIVSAGPVDVIRS >Mature_892_residues TSTNVTISSTPDLRHVLTKDVNKTILENGLTILLKEVHTAPVVSVQVWYRVGSRNEALGLNGITHQLEHLMFKGTHSRPV QFGKLFSALGSASNAFTSYDMTAYYGTVGSDKLETLLILEADRMQNVALTAEHLASEKRVVISELQGYENSPDYRLSKAV MQQAFPESNYGLSVGGNKSDVEQFTLDQVQEYYQTYYQPSNATLVITGDFDESTVLEQIQTYFGPIPSHPVATAPAPMSV VTKTAPSAPIVLKEPGSAPLLDAVYPIPDAQHPDIPALEILDSILSAGRNSRFYPALIESGLATNAHAYVASLMDGGWYN ISVTAAAGELSEIDQVVEATLEQLRSQPITLEELERAKTQVKAGFILSNREIENQASQLAYNQIVTNDHCFSDRYLRGIE AVTPTDVQRVAQTYLTPTQRTVGLFEPTQLEGQPMPAGIPATQTAENFTPSEPVDPAQVAKYLPDLATSAGSDTQSLPER WVLDNGLTVLLLEDHSTPTVTLSGHIRAGNQWDYLTLGGVASMTADNLMSGTTSKDDLAIAKALENRGASLDFLSLREGV DVSGYALSPDLPVVLETLADVLQHAIFPQQLLDLSRQRMLTHLQLELDDPGALARRTFQQKIYTQDHPFHGFPTANSLKN ISREGILRFYEQHYRPDNMILTLVGDFEGAELRSHLKRTLGQWQNPRSSTALNFPEPQMPPTIQRVNAPLPGKTQVVTYM GYPGIERHHSLYYAAMLLNQIIGGDTLSSRLGTEIRDRKGLTYGIYSYFAAGLHAGPFAVQMQTSPEDTQTAISSTLALL KQVKAEGITQSELETAQRSILNSYPVDLADPDILAQRFLMNEVLGLPIEEIRHLPQRIGAVTMAEINQAIEAFIHPDRMV IVSAGPVDVIRS
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=207, Percent_Identity=30.9178743961353, Blast_Score=93, Evalue=9e-19, Organism=Homo sapiens, GI94538354, Length=363, Percent_Identity=22.5895316804408, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI41352061, Length=358, Percent_Identity=24.8603351955307, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1787770, Length=218, Percent_Identity=26.1467889908257, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17553678, Length=353, Percent_Identity=23.5127478753541, Blast_Score=84, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71981120, Length=205, Percent_Identity=29.7560975609756, Blast_Score=76, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71999683, Length=215, Percent_Identity=24.1860465116279, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323192, Length=365, Percent_Identity=24.9315068493151, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6321813, Length=433, Percent_Identity=22.1709006928406, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357875, Length=425, Percent_Identity=24.9411764705882, Blast_Score=84, Evalue=5e-16, Organism=Drosophila melanogaster, GI24646943, Length=425, Percent_Identity=24.9411764705882, Blast_Score=84, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 98008; Mature: 97877
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTNVTISSTPDLRHVLTKDVNKTILENGLTILLKEVHTAPVVSVQVWYRVGSRNEALG CCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCC LNGITHQLEHLMFKGTHSRPVQFGKLFSALGSASNAFTSYDMTAYYGTVGSDKLETLLIL CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEE EADRMQNVALTAEHLASEKRVVISELQGYENSPDYRLSKAVMQQAFPESNYGLSVGGNKS EHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHH DVEQFTLDQVQEYYQTYYQPSNATLVITGDFDESTVLEQIQTYFGPIPSHPVATAPAPMS HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH VVTKTAPSAPIVLKEPGSAPLLDAVYPIPDAQHPDIPALEILDSILSAGRNSRFYPALIE HHCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHH SGLATNAHAYVASLMDGGWYNISVTAAAGELSEIDQVVEATLEQLRSQPITLEELERAKT CCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QVKAGFILSNREIENQASQLAYNQIVTNDHCFSDRYLRGIEAVTPTDVQRVAQTYLTPTQ HHHHCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCH RTVGLFEPTQLEGQPMPAGIPATQTAENFTPSEPVDPAQVAKYLPDLATSAGSDTQSLPE HEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCH RWVLDNGLTVLLLEDHSTPTVTLSGHIRAGNQWDYLTLGGVASMTADNLMSGTTSKDDLA HHEECCCCEEEEEECCCCCEEEEEEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCHHHH IAKALENRGASLDFLSLREGVDVSGYALSPDLPVVLETLADVLQHAIFPQQLLDLSRQRM HHHHHHHCCCCEEEHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LTHLQLELDDPGALARRTFQQKIYTQDHPFHGFPTANSLKNISREGILRFYEQHYRPDNM HHHEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE ILTLVGDFEGAELRSHLKRTLGQWQNPRSSTALNFPEPQMPPTIQRVNAPLPGKTQVVTY EEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEE MGYPGIERHHSLYYAAMLLNQIIGGDTLSSRLGTEIRDRKGLTYGIYSYFAAGLHAGPFA ECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCEE VQMQTSPEDTQTAISSTLALLKQVKAEGITQSELETAQRSILNSYPVDLADPDILAQRFL EEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH MNEVLGLPIEEIRHLPQRIGAVTMAEINQAIEAFIHPDRMVIVSAGPVDVIRS HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCC >Mature Secondary Structure TSTNVTISSTPDLRHVLTKDVNKTILENGLTILLKEVHTAPVVSVQVWYRVGSRNEALG CCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCC LNGITHQLEHLMFKGTHSRPVQFGKLFSALGSASNAFTSYDMTAYYGTVGSDKLETLLIL CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEE EADRMQNVALTAEHLASEKRVVISELQGYENSPDYRLSKAVMQQAFPESNYGLSVGGNKS EHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHH DVEQFTLDQVQEYYQTYYQPSNATLVITGDFDESTVLEQIQTYFGPIPSHPVATAPAPMS HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH VVTKTAPSAPIVLKEPGSAPLLDAVYPIPDAQHPDIPALEILDSILSAGRNSRFYPALIE HHCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHH SGLATNAHAYVASLMDGGWYNISVTAAAGELSEIDQVVEATLEQLRSQPITLEELERAKT CCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QVKAGFILSNREIENQASQLAYNQIVTNDHCFSDRYLRGIEAVTPTDVQRVAQTYLTPTQ HHHHCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCH RTVGLFEPTQLEGQPMPAGIPATQTAENFTPSEPVDPAQVAKYLPDLATSAGSDTQSLPE HEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCH RWVLDNGLTVLLLEDHSTPTVTLSGHIRAGNQWDYLTLGGVASMTADNLMSGTTSKDDLA HHEECCCCEEEEEECCCCCEEEEEEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCHHHH IAKALENRGASLDFLSLREGVDVSGYALSPDLPVVLETLADVLQHAIFPQQLLDLSRQRM HHHHHHHCCCCEEEHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LTHLQLELDDPGALARRTFQQKIYTQDHPFHGFPTANSLKNISREGILRFYEQHYRPDNM HHHEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE ILTLVGDFEGAELRSHLKRTLGQWQNPRSSTALNFPEPQMPPTIQRVNAPLPGKTQVVTY EEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEE MGYPGIERHHSLYYAAMLLNQIIGGDTLSSRLGTEIRDRKGLTYGIYSYFAAGLHAGPFA ECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCEE VQMQTSPEDTQTAISSTLALLKQVKAEGITQSELETAQRSILNSYPVDLADPDILAQRFL EEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH MNEVLGLPIEEIRHLPQRIGAVTMAEINQAIEAFIHPDRMVIVSAGPVDVIRS HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]