| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is pheT [H]
Identifier: 158337435
GI number: 158337435
Start: 4337001
End: 4339442
Strand: Reverse
Name: pheT [H]
Synonym: AM1_4313
Alternate gene names: 158337435
Gene position: 4339442-4337001 (Counterclockwise)
Preceding gene: 158337446
Following gene: 158337433
Centisome position: 66.72
GC content: 52.17
Gene sequence:
>2442_bases ATGCGTATCTCTCTCAATTGGCTTAAAAATCTAGTCGATATCGATCTGTCACCCGAAGATTTGGCAGAACAACTGACTCT GGCTGGGTTTGAGGTTGAGGATATTGAAGATTTGCGCACTTGGGCGGATGGCGTTGTGGTGGGGAAAGTGCTGACCTGTG AGTCCCATCCCAATGCCGATAAACTACGCGTTTGTACCGTTGATATTGGTGAAGCAGAGCCATCTCAAATTGTCTGTGGT GCCCCCAACGTCAAAGCCGGACTATATGTACCTGTCGCTACCTTAGGCACCTACTTACCCACACCGGACTTAAAAATCAA AAAAGCTAAACTCCGAGGTGTACCTTCTGCCGGAATGATTTGCTCCCTTACCGAGCTGGGCTTAGAAAGCGAGATTGATG GCATCCATAGCTTTGAAACGGATGGGGTAGCAGTTGGAAATGATGTCCGCCCCCTCTTAGGATTAGATGACGTCATCTTA GATCTGACCTCCACCGCGAACCGTGCCGATGCTCTCAGCATGGTCGGAGTGGCTCGTGAAGTCACGGCACTGACAGGGGC AAAGCTAAAACTTCCTGCTACCCCCAAATTGGAGATTCCCTCCGGCAAGGACGTCAAAGTGGACTTGTCTGACGCAGAAG CCTGCCCTGCCTATATCGCCACGGTACTAGAAAATGTCACCATCGCCCCTTCTCCAGGCTGGCTGCAGCAGCGACTAATC GCCGCTGGCACTCGCCCCATTAATAATGTGGTGGATATTACCAACTACATCCTGCTGGAATGGGGACAGCCCCTCCATGC CTTTGATGCTGATTCCTTGGAGACTTTAGCAAAGAAAAAGCCCCTGACCTTAGGCGTACGTCTCGCCAAATCTGGTGAAA CCCTCACAACCCTGGATAGCCAAAAGCGCAAGCTGCAGGAACAAACCCTGGTGATTACCGCTAATGATCAGCCAGTGGCC TTAGGGGGCGTAATGGGAGGTGAGGAGACTGAAGTTAAAGACACGAGTACTCGCTTAGTCCTGGAAGCTGCGCTATTCAA CTCTCTGACCATTCGACGCTCAGCCCGTAGTCAAAGCCTCCGCAGTGAAGCCTCGGCCCGCTACGAGCGTGGGGTCAATG AATCTCAATTAGAAACTGCTTGCCTGCATGCCTTGCAGCTGTTGGTGGATTTGACAGGGGCCAAGGTGGTTGCTCAACAG CGAGCCGACCATCGCAAGTCTTTGGAACGGTCGATTGAGCTGCGTTTGGATCGAGTGAATCATGTGTTGGGTAAAGTCAA AGGTAAGAAAGGTGAGCCAACAGACTTAACCGCCAAAGATATCCTGCCGATTTTAAAATCTCTCAGTTTTGACACGACCC CCACCAATCGGCCTGAGACCTGGACTGTCAAGGTGCCGCCCCATCGCCATAGCGATATTGAACGCGAAATCGACTTGGTA GAGGAAATTGCTCGACTGTATGGCTATGACAATTTCTGTGAGACTTTACCTGCTAAGACCGAGTTAGGCACCCTATCCAG TCAGGATGCTTTGGCCCGTAAACTCAGAGAAGCCTTCCGGGCAGTGGGGTTAACTGAGCTAATCCACTATTCCTGGGTCA AACCTGGGGGGGATGACCAAGTGGTCGTGGTGAATCCCTTATTGGTGGAGTTCTCTGCTCTGCGCACGGAAATGCTGACC AGCTTGCTGAATGCCTGTCAACGCAACTGGGAACAGGGGAATGGAGCGCTCAATGGCTTTGAAATCGGCCAAGTGTTCTG GAAAGAGGGCGAGAAACTAAAAGAGGCTCGGGCCATTGCAGGCATTCTGGGGGGCGACCCCGCCCAAGGCAAATGGATGC GCACCGCCAATCAAGACTATGCCATGACCTGGTTCGAAGCCAAGGGATTATTGGAGCGAGTCCTAAGCCAGTTGGGATTG TCAGTGACGTTTCAATCCGATTGTCCTGATCAGCGGCTCCATCCGGGATGCACGGCGGCCCTGATTTCTCAGGGAGCGAA GCTTGGCTATTTCGGCCAGATCCATCCTCAAGTGCAGCAGGAGCGAGACTTGCCGACGGTCTATGTCTTTGAGCTGAATT TAGACTTACTGCTAGAACAGCTCGCCCGCTTGCAGACGAAGGCAACGTTATTTTCTACCTATTCCACCTATCCAGCTGCT GATCGCGATTTGGCTTTCTTTATTCCTACGGAGGTAACTGTTGCCGAAATCGAAAAAGTGATTCGCAAGGCAGCAGGCGG TCGTAAGCAATCCCTGCTGACGGCCATTGAGCTGTTTGATGAATACCAAGGGGAACATGTGCCGGAAGGGCAGCGGAGTT TGGCGTTTCGATTGCTGTATCAGGCGTGCGATCGCACCCTCACGGACGAAGAGGTCAACCCCATCCACCAAAAGGTGCGT AACGCCCTAGAAAAGCAGTTCAAGGTGAGCCTCAGAAGCTAA
Upstream 100 bases:
>100_bases CAGCTTCTTTTTTTGCTCTGTAGTTGATCATCTCAGCCCGTACACTAGGCTGGACCTTGATTCGAACTATCTCACTCTTA ATTCAACTAGCACCAAATTT
Downstream 100 bases:
>100_bases GTCCGCCGACTTGCCACTATCTCAGGAAGTTTAACAATAATTTGATTGCGGCCATTGACCTTGGCCTCATACAGAGCTGC ATCCGCAACCGCCACCAAGT
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 813; Mature: 813
Protein sequence:
>813_residues MRISLNWLKNLVDIDLSPEDLAEQLTLAGFEVEDIEDLRTWADGVVVGKVLTCESHPNADKLRVCTVDIGEAEPSQIVCG APNVKAGLYVPVATLGTYLPTPDLKIKKAKLRGVPSAGMICSLTELGLESEIDGIHSFETDGVAVGNDVRPLLGLDDVIL DLTSTANRADALSMVGVAREVTALTGAKLKLPATPKLEIPSGKDVKVDLSDAEACPAYIATVLENVTIAPSPGWLQQRLI AAGTRPINNVVDITNYILLEWGQPLHAFDADSLETLAKKKPLTLGVRLAKSGETLTTLDSQKRKLQEQTLVITANDQPVA LGGVMGGEETEVKDTSTRLVLEAALFNSLTIRRSARSQSLRSEASARYERGVNESQLETACLHALQLLVDLTGAKVVAQQ RADHRKSLERSIELRLDRVNHVLGKVKGKKGEPTDLTAKDILPILKSLSFDTTPTNRPETWTVKVPPHRHSDIEREIDLV EEIARLYGYDNFCETLPAKTELGTLSSQDALARKLREAFRAVGLTELIHYSWVKPGGDDQVVVVNPLLVEFSALRTEMLT SLLNACQRNWEQGNGALNGFEIGQVFWKEGEKLKEARAIAGILGGDPAQGKWMRTANQDYAMTWFEAKGLLERVLSQLGL SVTFQSDCPDQRLHPGCTAALISQGAKLGYFGQIHPQVQQERDLPTVYVFELNLDLLLEQLARLQTKATLFSTYSTYPAA DRDLAFFIPTEVTVAEIEKVIRKAAGGRKQSLLTAIELFDEYQGEHVPEGQRSLAFRLLYQACDRTLTDEEVNPIHQKVR NALEKQFKVSLRS
Sequences:
>Translated_813_residues MRISLNWLKNLVDIDLSPEDLAEQLTLAGFEVEDIEDLRTWADGVVVGKVLTCESHPNADKLRVCTVDIGEAEPSQIVCG APNVKAGLYVPVATLGTYLPTPDLKIKKAKLRGVPSAGMICSLTELGLESEIDGIHSFETDGVAVGNDVRPLLGLDDVIL DLTSTANRADALSMVGVAREVTALTGAKLKLPATPKLEIPSGKDVKVDLSDAEACPAYIATVLENVTIAPSPGWLQQRLI AAGTRPINNVVDITNYILLEWGQPLHAFDADSLETLAKKKPLTLGVRLAKSGETLTTLDSQKRKLQEQTLVITANDQPVA LGGVMGGEETEVKDTSTRLVLEAALFNSLTIRRSARSQSLRSEASARYERGVNESQLETACLHALQLLVDLTGAKVVAQQ RADHRKSLERSIELRLDRVNHVLGKVKGKKGEPTDLTAKDILPILKSLSFDTTPTNRPETWTVKVPPHRHSDIEREIDLV EEIARLYGYDNFCETLPAKTELGTLSSQDALARKLREAFRAVGLTELIHYSWVKPGGDDQVVVVNPLLVEFSALRTEMLT SLLNACQRNWEQGNGALNGFEIGQVFWKEGEKLKEARAIAGILGGDPAQGKWMRTANQDYAMTWFEAKGLLERVLSQLGL SVTFQSDCPDQRLHPGCTAALISQGAKLGYFGQIHPQVQQERDLPTVYVFELNLDLLLEQLARLQTKATLFSTYSTYPAA DRDLAFFIPTEVTVAEIEKVIRKAAGGRKQSLLTAIELFDEYQGEHVPEGQRSLAFRLLYQACDRTLTDEEVNPIHQKVR NALEKQFKVSLRS >Mature_813_residues MRISLNWLKNLVDIDLSPEDLAEQLTLAGFEVEDIEDLRTWADGVVVGKVLTCESHPNADKLRVCTVDIGEAEPSQIVCG APNVKAGLYVPVATLGTYLPTPDLKIKKAKLRGVPSAGMICSLTELGLESEIDGIHSFETDGVAVGNDVRPLLGLDDVIL DLTSTANRADALSMVGVAREVTALTGAKLKLPATPKLEIPSGKDVKVDLSDAEACPAYIATVLENVTIAPSPGWLQQRLI AAGTRPINNVVDITNYILLEWGQPLHAFDADSLETLAKKKPLTLGVRLAKSGETLTTLDSQKRKLQEQTLVITANDQPVA LGGVMGGEETEVKDTSTRLVLEAALFNSLTIRRSARSQSLRSEASARYERGVNESQLETACLHALQLLVDLTGAKVVAQQ RADHRKSLERSIELRLDRVNHVLGKVKGKKGEPTDLTAKDILPILKSLSFDTTPTNRPETWTVKVPPHRHSDIEREIDLV EEIARLYGYDNFCETLPAKTELGTLSSQDALARKLREAFRAVGLTELIHYSWVKPGGDDQVVVVNPLLVEFSALRTEMLT SLLNACQRNWEQGNGALNGFEIGQVFWKEGEKLKEARAIAGILGGDPAQGKWMRTANQDYAMTWFEAKGLLERVLSQLGL SVTFQSDCPDQRLHPGCTAALISQGAKLGYFGQIHPQVQQERDLPTVYVFELNLDLLLEQLARLQTKATLFSTYSTYPAA DRDLAFFIPTEVTVAEIEKVIRKAAGGRKQSLLTAIELFDEYQGEHVPEGQRSLAFRLLYQACDRTLTDEEVNPIHQKVR NALEKQFKVSLRS
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=833, Percent_Identity=35.0540216086435, Blast_Score=429, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6325304, Length=122, Percent_Identity=32.7868852459016, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 89353; Mature: 89353
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISLNWLKNLVDIDLSPEDLAEQLTLAGFEVEDIEDLRTWADGVVVGKVLTCESHPNAD CEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCC KLRVCTVDIGEAEPSQIVCGAPNVKAGLYVPVATLGTYLPTPDLKIKKAKLRGVPSAGMI CEEEEEEECCCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCCCCEEEHHHHCCCCCCCCE CSLTELGLESEIDGIHSFETDGVAVGNDVRPLLGLDDVILDLTSTANRADALSMVGVARE EEHHHHCCHHHCCCCCCCCCCCEEECCCCCHHHCHHHHHHHHHCCCCHHHHHHHHHHHHH VTALTGAKLKLPATPKLEIPSGKDVKVDLSDAEACPAYIATVLENVTIAPSPGWLQQRLI HHHHCCCEEECCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHCCEECCCCCHHHHHHH AAGTRPINNVVDITNYILLEWGQPLHAFDADSLETLAKKKPLTLGVRLAKSGETLTTLDS HHCCCCCHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEHHHH QKRKLQEQTLVITANDQPVALGGVMGGEETEVKDTSTRLVLEAALFNSLTIRRSARSQSL HHHHHHHCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RSEASARYERGVNESQLETACLHALQLLVDLTGAKVVAQQRADHRKSLERSIELRLDRVN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH HVLGKVKGKKGEPTDLTAKDILPILKSLSFDTTPTNRPETWTVKVPPHRHSDIEREIDLV HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH EEIARLYGYDNFCETLPAKTELGTLSSQDALARKLREAFRAVGLTELIHYSWVKPGGDDQ HHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VVVVNPLLVEFSALRTEMLTSLLNACQRNWEQGNGALNGFEIGQVFWKEGEKLKEARAIA EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHH GILGGDPAQGKWMRTANQDYAMTWFEAKGLLERVLSQLGLSVTFQSDCPDQRLHPGCTAA HHHCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHH LISQGAKLGYFGQIHPQVQQERDLPTVYVFELNLDLLLEQLARLQTKATLFSTYSTYPAA HHHCCCCCCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC DRDLAFFIPTEVTVAEIEKVIRKAAGGRKQSLLTAIELFDEYQGEHVPEGQRSLAFRLLY CCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH QACDRTLTDEEVNPIHQKVRNALEKQFKVSLRS HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRISLNWLKNLVDIDLSPEDLAEQLTLAGFEVEDIEDLRTWADGVVVGKVLTCESHPNAD CEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCC KLRVCTVDIGEAEPSQIVCGAPNVKAGLYVPVATLGTYLPTPDLKIKKAKLRGVPSAGMI CEEEEEEECCCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCCCCEEEHHHHCCCCCCCCE CSLTELGLESEIDGIHSFETDGVAVGNDVRPLLGLDDVILDLTSTANRADALSMVGVARE EEHHHHCCHHHCCCCCCCCCCCEEECCCCCHHHCHHHHHHHHHCCCCHHHHHHHHHHHHH VTALTGAKLKLPATPKLEIPSGKDVKVDLSDAEACPAYIATVLENVTIAPSPGWLQQRLI HHHHCCCEEECCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHCCEECCCCCHHHHHHH AAGTRPINNVVDITNYILLEWGQPLHAFDADSLETLAKKKPLTLGVRLAKSGETLTTLDS HHCCCCCHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEHHHH QKRKLQEQTLVITANDQPVALGGVMGGEETEVKDTSTRLVLEAALFNSLTIRRSARSQSL HHHHHHHCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RSEASARYERGVNESQLETACLHALQLLVDLTGAKVVAQQRADHRKSLERSIELRLDRVN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH HVLGKVKGKKGEPTDLTAKDILPILKSLSFDTTPTNRPETWTVKVPPHRHSDIEREIDLV HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH EEIARLYGYDNFCETLPAKTELGTLSSQDALARKLREAFRAVGLTELIHYSWVKPGGDDQ HHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VVVVNPLLVEFSALRTEMLTSLLNACQRNWEQGNGALNGFEIGQVFWKEGEKLKEARAIA EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHH GILGGDPAQGKWMRTANQDYAMTWFEAKGLLERVLSQLGLSVTFQSDCPDQRLHPGCTAA HHHCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHH LISQGAKLGYFGQIHPQVQQERDLPTVYVFELNLDLLLEQLARLQTKATLFSTYSTYPAA HHHCCCCCCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC DRDLAFFIPTEVTVAEIEKVIRKAAGGRKQSLLTAIELFDEYQGEHVPEGQRSLAFRLLY CCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH QACDRTLTDEEVNPIHQKVRNALEKQFKVSLRS HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA