| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337396
Identifier: 158337396
GI number: 158337396
Start: 4294802
End: 4295221
Strand: Direct
Name: 158337396
Synonym: AM1_4275
Alternate gene names: NA
Gene position: 4294802-4295221 (Clockwise)
Preceding gene: 158337394
Following gene: 158337397
Centisome position: 66.04
GC content: 53.1
Gene sequence:
>420_bases ATGTCTAAGTTACCAGCCCCACCGTATCGTCCCTATCGTCAGGCATTGGCTGTCTGCATGGCGGTGATCGTGCCCTTGGG ATTGGCCCTTAAGTTTTACCAGGGACCAGGGCAGTCATGGCTCAATGATACGTTCGGTGGGGTTCCCTATGAGATTTTCT TTGTTTTGCTGGCGGCCTATATTTGGCCTGCGGTCTCTCCTGGAAGAATTGCGATCGCAGTCTGTCTGGCCACCTGTGGA GTGGAATTTTTACAGCTGTGGCAACCGGCTTGGCTACAGGCCATTCGAGCCACGTTGCCAGGACGCCTGGTTTTAGGCAC TACCTTTAGCTGGGCGGACTTTCCCTACTATTTTGTCGGCAGTGGGTTGGGATGGTTAGGGTTGCGAGGGCTCCAGCGAA AAATATATCGCACCTATTAA
Upstream 100 bases:
>100_bases CAGGATGGCAGGGAGTAAGGCAGTCATCGCAGCCCTCAATCAATGGGTAAGGTCATCCTAGGTTGGATTTATGCGAGCGT CACTCGGATTGCTGATTGTC
Downstream 100 bases:
>100_bases TTCGCCTCATTTATTTTAGGTATAAAACATCCGATGCTGATCCGCCTCATAAATCTGCCGTGGTAAATTGTCAGATGCGC GTGTAGCACCAGCCCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSKLPAPPYRPYRQALAVCMAVIVPLGLALKFYQGPGQSWLNDTFGGVPYEIFFVLLAAYIWPAVSPGRIAIAVCLATCG VEFLQLWQPAWLQAIRATLPGRLVLGTTFSWADFPYYFVGSGLGWLGLRGLQRKIYRTY
Sequences:
>Translated_139_residues MSKLPAPPYRPYRQALAVCMAVIVPLGLALKFYQGPGQSWLNDTFGGVPYEIFFVLLAAYIWPAVSPGRIAIAVCLATCG VEFLQLWQPAWLQAIRATLPGRLVLGTTFSWADFPYYFVGSGLGWLGLRGLQRKIYRTY >Mature_138_residues SKLPAPPYRPYRQALAVCMAVIVPLGLALKFYQGPGQSWLNDTFGGVPYEIFFVLLAAYIWPAVSPGRIAIAVCLATCGV EFLQLWQPAWLQAIRATLPGRLVLGTTFSWADFPYYFVGSGLGWLGLRGLQRKIYRTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15492; Mature: 15361
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLPAPPYRPYRQALAVCMAVIVPLGLALKFYQGPGQSWLNDTFGGVPYEIFFVLLAAY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHH IWPAVSPGRIAIAVCLATCGVEFLQLWQPAWLQAIRATLPGRLVLGTTFSWADFPYYFVG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHH SGLGWLGLRGLQRKIYRTY CCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SKLPAPPYRPYRQALAVCMAVIVPLGLALKFYQGPGQSWLNDTFGGVPYEIFFVLLAAY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHH IWPAVSPGRIAIAVCLATCGVEFLQLWQPAWLQAIRATLPGRLVLGTTFSWADFPYYFVG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHH SGLGWLGLRGLQRKIYRTY CCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA