| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337370
Identifier: 158337370
GI number: 158337370
Start: 4266856
End: 4267371
Strand: Reverse
Name: 158337370
Synonym: AM1_4248
Alternate gene names: NA
Gene position: 4267371-4266856 (Counterclockwise)
Preceding gene: 158337380
Following gene: 158337369
Centisome position: 65.61
GC content: 49.81
Gene sequence:
>516_bases ATGCCCTCCGGTCGCACCCATGATCAAATCACCTTAGGGATGCTTCCTGGTATTGCTATCGTTGCCCTAGTGTTAAGTCG GAGTGCAAGCCTGACCCTCAGTCTCAGTGGTGCCTTTCTATTCAGTGGGTTGATGTTTGGCCCGGATCTCGATATCTACT CCATCCAATACAAACGGTGGGGATGGCTGCGAGTCATTTGGCTACCCTACCGCAAGGTATTACACCATCGATCCTGGCTA TCTCATGGCCCCATTATTGGCACGATACTAAGATTGGTTTACCTAGGCGTCTGGCTCGGGTTGGGGGCCATGCTAGCAGG ACTCTTGCTCTCCCAAGTTTGGGGCGTTCCTGTGAATCGTCAACAACTCTTGCAACAGGCAAAGCTGTATAGCCAGCAAT ATCTGCCCGAAGGGCTAGCTATTTTACTCGGACTAGAAATAGGAGCTATGAGCCATTCTTTTAGTGATGGCCTTGGATCG CTATGCAAGTCAACATTAAAACGGCTCAAACTGTAA
Upstream 100 bases:
>100_bases TTGAAGCAATCGAAAATGTATTGTAGCAGACTGTTGCCAGGTTTACCCACAAATCCAACAAATCCAGCATAATGGATGCA ACTTTGCTCCGTTTTCTCTT
Downstream 100 bases:
>100_bases TGTTTTCACCTTCGTTGTCAGTAATCTTTATCACTTCGCTTGAATTACTGGCTATATAACTGGTAAATAACGCATCATAT GGTTAGCCCTCACAATTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPSGRTHDQITLGMLPGIAIVALVLSRSASLTLSLSGAFLFSGLMFGPDLDIYSIQYKRWGWLRVIWLPYRKVLHHRSWL SHGPIIGTILRLVYLGVWLGLGAMLAGLLLSQVWGVPVNRQQLLQQAKLYSQQYLPEGLAILLGLEIGAMSHSFSDGLGS LCKSTLKRLKL
Sequences:
>Translated_171_residues MPSGRTHDQITLGMLPGIAIVALVLSRSASLTLSLSGAFLFSGLMFGPDLDIYSIQYKRWGWLRVIWLPYRKVLHHRSWL SHGPIIGTILRLVYLGVWLGLGAMLAGLLLSQVWGVPVNRQQLLQQAKLYSQQYLPEGLAILLGLEIGAMSHSFSDGLGS LCKSTLKRLKL >Mature_170_residues PSGRTHDQITLGMLPGIAIVALVLSRSASLTLSLSGAFLFSGLMFGPDLDIYSIQYKRWGWLRVIWLPYRKVLHHRSWLS HGPIIGTILRLVYLGVWLGLGAMLAGLLLSQVWGVPVNRQQLLQQAKLYSQQYLPEGLAILLGLEIGAMSHSFSDGLGSL CKSTLKRLKL
Specific function: Unknown
COG id: COG2389
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18909; Mature: 18778
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGRTHDQITLGMLPGIAIVALVLSRSASLTLSLSGAFLFSGLMFGPDLDIYSIQYKRW CCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEEEEECCC GWLRVIWLPYRKVLHHRSWLSHGPIIGTILRLVYLGVWLGLGAMLAGLLLSQVWGVPVNR CEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QQLLQQAKLYSQQYLPEGLAILLGLEIGAMSHSFSDGLGSLCKSTLKRLKL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSGRTHDQITLGMLPGIAIVALVLSRSASLTLSLSGAFLFSGLMFGPDLDIYSIQYKRW CCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEEEEECCC GWLRVIWLPYRKVLHHRSWLSHGPIIGTILRLVYLGVWLGLGAMLAGLLLSQVWGVPVNR CEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QQLLQQAKLYSQQYLPEGLAILLGLEIGAMSHSFSDGLGSLCKSTLKRLKL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA