| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158337364
Identifier: 158337364
GI number: 158337364
Start: 4259736
End: 4260125
Strand: Direct
Name: 158337364
Synonym: AM1_4242
Alternate gene names: NA
Gene position: 4259736-4260125 (Clockwise)
Preceding gene: 158337363
Following gene: 158337366
Centisome position: 65.5
GC content: 46.15
Gene sequence:
>390_bases GTGAGCCACACCATGAAAGCTTTTTGGCAGGACATCAATGATGTGGTCGAGTCTAACCATTCAAAAAAGCTGCCCCTCAT TGATGCATTGAACCGATGGACTGACTTTTGTAGGGTTGAAGGAAACTTCTTCAGACTTATTGACGATCAGGGATACACTA TCCAATTTTGTTTTGAAGAGACCCTACCGGATGAGGTCGAAGATGCCACGTATTTACGAGTTGTACTGGTTGACTTTCCG ATTCCCGAACGACGGGGGTGTTATTCCAAGCTTGTTACGGTTGGTGAGTCGTCTGCGCTGATAGAGAAAGCCTTCTCTGT GGGGGCGAACCCTCAGAAACTTGATGGATTGGAGTTTTCTTTATGGGGTGTAGTCGATGATCACGGATAA
Upstream 100 bases:
>100_bases AAACTGGATTGTCTTGTTATTTCTCAGCTTTCAAAAAAACATATTTGCCATCTAGCTCCTGAATTATCGTTATCCCTGAT GACGAGGAAAGGTGAGTCCT
Downstream 100 bases:
>100_bases CCCATTGTTTCACCGAGAGGCGGCTGAAGAGTTGTTGATAATAAACGGAGCAAGCCACCCTATGACCTTCTATATCAACG TAATTTAGGCAATATTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSHTMKAFWQDINDVVESNHSKKLPLIDALNRWTDFCRVEGNFFRLIDDQGYTIQFCFEETLPDEVEDATYLRVVLVDFP IPERRGCYSKLVTVGESSALIEKAFSVGANPQKLDGLEFSLWGVVDDHG
Sequences:
>Translated_129_residues MSHTMKAFWQDINDVVESNHSKKLPLIDALNRWTDFCRVEGNFFRLIDDQGYTIQFCFEETLPDEVEDATYLRVVLVDFP IPERRGCYSKLVTVGESSALIEKAFSVGANPQKLDGLEFSLWGVVDDHG >Mature_128_residues SHTMKAFWQDINDVVESNHSKKLPLIDALNRWTDFCRVEGNFFRLIDDQGYTIQFCFEETLPDEVEDATYLRVVLVDFPI PERRGCYSKLVTVGESSALIEKAFSVGANPQKLDGLEFSLWGVVDDHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14734; Mature: 14603
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTMKAFWQDINDVVESNHSKKLPLIDALNRWTDFCRVEGNFFRLIDDQGYTIQFCFEE CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCEEEEEECC TLPDEVEDATYLRVVLVDFPIPERRGCYSKLVTVGESSALIEKAFSVGANPQKLDGLEFS CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEE LWGVVDDHG EEEEEECCC >Mature Secondary Structure SHTMKAFWQDINDVVESNHSKKLPLIDALNRWTDFCRVEGNFFRLIDDQGYTIQFCFEE CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCEEEEEECC TLPDEVEDATYLRVVLVDFPIPERRGCYSKLVTVGESSALIEKAFSVGANPQKLDGLEFS CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEE LWGVVDDHG EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA