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The map label for this gene is ybiF [C]

Identifier: 158337267

GI number: 158337267

Start: 4179826

End: 4180764

Strand: Reverse

Name: ybiF [C]

Synonym: AM1_4144

Alternate gene names: 158337267

Gene position: 4180764-4179826 (Counterclockwise)

Preceding gene: 158337270

Following gene: 158337265

Centisome position: 64.28

GC content: 50.59

Gene sequence:

>939_bases
TTGCCCCAGACTATGATTGGTTTTCTGATCGTCTTACTGGGCGCCGTCTTTTTTTGTTTTCAAAACGTTATCGTCCGCAT
TCTCTTTAACGAATACACCGTTGCTGGCCTGCTGCAAACGGGAGGGTTCGTTGCCCCTTCTCTCCCCAACTCTTTTTTGT
TAATGGCGATGCGGATGGTGTGGGTGGTGCCGTTGGTATCAGCCATGACACCGCTGTTTTACCCTTCGTTGTGGTGGGAC
TTAAGAAAGCTGGCTCAAAAGCAGAATCGTCCTGACCTAATGCGATCTCTGTTGGGTGGCGTATTTATGTACCTCTACCT
GGCACTGCTCTATTTCTCAGTGGGGCTGATTCCAACCGGAATTGCCCTAACCCTATTTTTCACCTTTCCCGTTTTTACAG
CCCTTCTCTCCTGGTACTTCTTTGGTACTGCGCCCTCCCGATTTCGCTGGACGGTCATGGGATTAGTCCTGGTCGGCAGT
GCCCTTACGGTTCCTCAAACTGGATTAACGGCTAATGCGTTGGGGGTTGGCTTGGGAATTGGTTCAGGGGTTGCCTATGC
CATCTATACGGTTCTCGCTCAAAAAAGCTTTGAGCAGGTCCATCCTATTCCCTATACCTGGATTAGCTTTGCGGTTACGC
TGGTCTTGTCCTGTTTAAGCTTGCTGTTCTGGACACAGCCTGAGGCCATTGAGTGGGGGCCATTATGGATTGGGGGCTTG
TTGTCAGCGATTGCCACATCTAGTGGGCATCTGCTCAACAATATGGGCATTCGTTTAATTGGGGCCACCACGGCATCCAT
TATCGGGGCTACCAATCCAGCGTTAACGGTTGTTCTGGCCTGGTTCGCCATTCAAGAGACCCTCAAGCCTCTGCAAATTT
TCGGCGTTATTTTGGTCACCTTTAGTGTGGCTTTGCTCAGTCGGGAACGGCAATCGTAG

Upstream 100 bases:

>100_bases
AATTTTGACTACCTATTTTTCCACCCCATGGATTGTTTGCAAAAGATAAAAGGTGCCTTACCTAAAATCAAGCCGACCTT
TGTAAAGGCTGATTTATGAG

Downstream 100 bases:

>100_bases
TTGAGAAAATATTCGGCTTTCTGATCCTTGGGGTGTCAGGTTCCGTCAAGCGTTGGACAACTAACACTTGAGCAGAGTGT
GGAGCTTGCTTTTTTCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MPQTMIGFLIVLLGAVFFCFQNVIVRILFNEYTVAGLLQTGGFVAPSLPNSFLLMAMRMVWVVPLVSAMTPLFYPSLWWD
LRKLAQKQNRPDLMRSLLGGVFMYLYLALLYFSVGLIPTGIALTLFFTFPVFTALLSWYFFGTAPSRFRWTVMGLVLVGS
ALTVPQTGLTANALGVGLGIGSGVAYAIYTVLAQKSFEQVHPIPYTWISFAVTLVLSCLSLLFWTQPEAIEWGPLWIGGL
LSAIATSSGHLLNNMGIRLIGATTASIIGATNPALTVVLAWFAIQETLKPLQIFGVILVTFSVALLSRERQS

Sequences:

>Translated_312_residues
MPQTMIGFLIVLLGAVFFCFQNVIVRILFNEYTVAGLLQTGGFVAPSLPNSFLLMAMRMVWVVPLVSAMTPLFYPSLWWD
LRKLAQKQNRPDLMRSLLGGVFMYLYLALLYFSVGLIPTGIALTLFFTFPVFTALLSWYFFGTAPSRFRWTVMGLVLVGS
ALTVPQTGLTANALGVGLGIGSGVAYAIYTVLAQKSFEQVHPIPYTWISFAVTLVLSCLSLLFWTQPEAIEWGPLWIGGL
LSAIATSSGHLLNNMGIRLIGATTASIIGATNPALTVVLAWFAIQETLKPLQIFGVILVTFSVALLSRERQS
>Mature_311_residues
PQTMIGFLIVLLGAVFFCFQNVIVRILFNEYTVAGLLQTGGFVAPSLPNSFLLMAMRMVWVVPLVSAMTPLFYPSLWWDL
RKLAQKQNRPDLMRSLLGGVFMYLYLALLYFSVGLIPTGIALTLFFTFPVFTALLSWYFFGTAPSRFRWTVMGLVLVGSA
LTVPQTGLTANALGVGLGIGSGVAYAIYTVLAQKSFEQVHPIPYTWISFAVTLVLSCLSLLFWTQPEAIEWGPLWIGGLL
SAIATSSGHLLNNMGIRLIGATTASIIGATNPALTVVLAWFAIQETLKPLQIFGVILVTFSVALLSRERQS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34175; Mature: 34044

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQTMIGFLIVLLGAVFFCFQNVIVRILFNEYTVAGLLQTGGFVAPSLPNSFLLMAMRMV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
WVVPLVSAMTPLFYPSLWWDLRKLAQKQNRPDLMRSLLGGVFMYLYLALLYFSVGLIPTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALTLFFTFPVFTALLSWYFFGTAPSRFRWTVMGLVLVGSALTVPQTGLTANALGVGLGI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHCCC
GSGVAYAIYTVLAQKSFEQVHPIPYTWISFAVTLVLSCLSLLFWTQPEAIEWGPLWIGGL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LSAIATSSGHLLNNMGIRLIGATTASIIGATNPALTVVLAWFAIQETLKPLQIFGVILVT
HHHHHCCCCCHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSVALLSRERQS
HHHHHHHHHCCC
>Mature Secondary Structure 
PQTMIGFLIVLLGAVFFCFQNVIVRILFNEYTVAGLLQTGGFVAPSLPNSFLLMAMRMV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH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HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]