Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337235

Identifier: 158337235

GI number: 158337235

Start: 4148176

End: 4148553

Strand: Direct

Name: 158337235

Synonym: AM1_4112

Alternate gene names: NA

Gene position: 4148176-4148553 (Clockwise)

Preceding gene: 158337234

Following gene: 158337236

Centisome position: 63.78

GC content: 44.71

Gene sequence:

>378_bases
ATGCAACTGAAACTAACACTTTATGGTGCTGTGGCCTATGCCGTTTTCAGTACATCACCTTGCTATGCCCAGATAGTGCA
TGTGATGACGTTTCAGAACTCGTCGGGTGGACGCCATATTAGAGAAATTACTGGCCAACAAACCCAGGATGATCAGTCCA
TTGGTGTTTCTCTCAATACGTCTGATGAGCGTACAACAACCCGTTCTTCGTCCACAGTGAATGGTGTAACCCAAGAGCAA
ACCTATACCTATATCAACTCAGCTAAGAGTCAGGCAGTAGAAACGGGGCATCGCAGAAGAATTGAACATACTCGGCTTTT
TGAAGCGTATGACTATTCGGACTACGCTGTTGACCACACTGTCGATTTTAGTTTTTAA

Upstream 100 bases:

>100_bases
ACTTTTATAGTCTGTGATTAAGCCAGCCACATATGACTGACTTCAGCTCCCAGGATTGAAATGTCTCGGACAGGCACCCC
GAATAAGGAGGGCATGATTG

Downstream 100 bases:

>100_bases
GTGCTAGTTGACTGCCTGGATACCCAATAGTCTCTACATCTATGGCGATTCAGTGTGCTGACCTCAGCGAGCTGCTAGGG
AAGATCACTCTTCTAACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MQLKLTLYGAVAYAVFSTSPCYAQIVHVMTFQNSSGGRHIREITGQQTQDDQSIGVSLNTSDERTTTRSSSTVNGVTQEQ
TYTYINSAKSQAVETGHRRRIEHTRLFEAYDYSDYAVDHTVDFSF

Sequences:

>Translated_125_residues
MQLKLTLYGAVAYAVFSTSPCYAQIVHVMTFQNSSGGRHIREITGQQTQDDQSIGVSLNTSDERTTTRSSSTVNGVTQEQ
TYTYINSAKSQAVETGHRRRIEHTRLFEAYDYSDYAVDHTVDFSF
>Mature_125_residues
MQLKLTLYGAVAYAVFSTSPCYAQIVHVMTFQNSSGGRHIREITGQQTQDDQSIGVSLNTSDERTTTRSSSTVNGVTQEQ
TYTYINSAKSQAVETGHRRRIEHTRLFEAYDYSDYAVDHTVDFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14073; Mature: 14073

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKLTLYGAVAYAVFSTSPCYAQIVHVMTFQNSSGGRHIREITGQQTQDDQSIGVSLNT
CEEEEEEHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCHHHHCCCCCCCCCCEEEEEEC
SDERTTTRSSSTVNGVTQEQTYTYINSAKSQAVETGHRRRIEHTRLFEAYDYSDYAVDHT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEE
VDFSF
EECCC
>Mature Secondary Structure
MQLKLTLYGAVAYAVFSTSPCYAQIVHVMTFQNSSGGRHIREITGQQTQDDQSIGVSLNT
CEEEEEEHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCHHHHCCCCCCCCCCEEEEEEC
SDERTTTRSSSTVNGVTQEQTYTYINSAKSQAVETGHRRRIEHTRLFEAYDYSDYAVDHT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEE
VDFSF
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA