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The map label for this gene is tnpA1 [H]

Identifier: 158337214

GI number: 158337214

Start: 4135533

End: 4135961

Strand: Reverse

Name: tnpA1 [H]

Synonym: AM1_4091

Alternate gene names: 158337214

Gene position: 4135961-4135533 (Counterclockwise)

Preceding gene: 158337215

Following gene: 158337213

Centisome position: 63.59

GC content: 41.26

Gene sequence:

>429_bases
ATGACATATCGCAAGTTATCCCATAGTGTGTGGGAATGCAAATATCATGTAGTATTTGTGCCGAAATATCGAAAGAGAAG
AATATATGGACGAATTAGGCAGAATTTAGGTGATATATTTCATGAACTGGCACGACATAAAGAGAGTGCCATAGAAGAAG
GCCATTTAATGCTAGATCATGTTCATATGTTGTTGAGTATTCCGCCGAAATACTCTGTGTCCAATGTGGTGGGCTATGTA
AAAGGTAAGAGTGCCATTTATATCGCTCGAGAGTTAGGCAATAGCCGGAATGCGACAGGCCATAAGTTTTGGTCTAGAGG
GTATTTTGTCTCAACAGTCGGCAGAGATGAGGAAGTGATTCGTCGATATATCAGACATCAGGAACAAGAGGAGCAAAAGC
TTGAGCAATTGAACTTGTTTCGGGCGTAG

Upstream 100 bases:

>100_bases
TAACTATCCTGTATAAGCCTGCGCTTTGAGCGCAGGACTCGTCAGGTTCCACCTATACCGCGGTAGAAAGGTCTCCTTTG
AAGTCTTCAAAGGAGACAGA

Downstream 100 bases:

>100_bases
CCCAAATCCCCTTTAAGGGGTTCTAATTCAAGCCTCCGGTTTTACCGGAGGTATCTGACTAAATAGTTTCATCCTTTTGG
AGCTGATGCCTTGCTCTACC

Product: IS200 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTYRKLSHSVWECKYHVVFVPKYRKRRIYGRIRQNLGDIFHELARHKESAIEEGHLMLDHVHMLLSIPPKYSVSNVVGYV
KGKSAIYIARELGNSRNATGHKFWSRGYFVSTVGRDEEVIRRYIRHQEQEEQKLEQLNLFRA

Sequences:

>Translated_142_residues
MTYRKLSHSVWECKYHVVFVPKYRKRRIYGRIRQNLGDIFHELARHKESAIEEGHLMLDHVHMLLSIPPKYSVSNVVGYV
KGKSAIYIARELGNSRNATGHKFWSRGYFVSTVGRDEEVIRRYIRHQEQEEQKLEQLNLFRA
>Mature_141_residues
TYRKLSHSVWECKYHVVFVPKYRKRRIYGRIRQNLGDIFHELARHKESAIEEGHLMLDHVHMLLSIPPKYSVSNVVGYVK
GKSAIYIARELGNSRNATGHKFWSRGYFVSTVGRDEEVIRRYIRHQEQEEQKLEQLNLFRA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 16915; Mature: 16784

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRKLSHSVWECKYHVVFVPKYRKRRIYGRIRQNLGDIFHELARHKESAIEEGHLMLDH
CCHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VHMLLSIPPKYSVSNVVGYVKGKSAIYIARELGNSRNATGHKFWSRGYFVSTVGRDEEVI
HHHHHHCCCCCCHHHHHHHHCCCCCEEEEHHCCCCCCCCCHHHHHCCEEEEECCCCHHHH
RRYIRHQEQEEQKLEQLNLFRA
HHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TYRKLSHSVWECKYHVVFVPKYRKRRIYGRIRQNLGDIFHELARHKESAIEEGHLMLDH
CHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VHMLLSIPPKYSVSNVVGYVKGKSAIYIARELGNSRNATGHKFWSRGYFVSTVGRDEEVI
HHHHHHCCCCCCHHHHHHHHCCCCCEEEEHHCCCCCCCCCHHHHHCCEEEEECCCCHHHH
RRYIRHQEQEEQKLEQLNLFRA
HHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]