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The map label for this gene is yfbL [H]

Identifier: 158337208

GI number: 158337208

Start: 4132623

End: 4133726

Strand: Reverse

Name: yfbL [H]

Synonym: AM1_4085

Alternate gene names: 158337208

Gene position: 4133726-4132623 (Counterclockwise)

Preceding gene: 158337209

Following gene: 158337207

Centisome position: 63.56

GC content: 52.54

Gene sequence:

>1104_bases
ATGAAAGGTGTGCGACAATGGCTAGGGTTTAGTCGTGGAAAGATGTTCAAAAGTCGGAAAGCTTGGATCTTAAGTGCGAT
CGCATGTCTGTTTGTGGTCTTTATGTCCTGCCAGTCTCCCCGGCCTGTCGCTCAATCTCCTCCCGTCTCTCCATCACCAG
AGGCGACGCCCGCAGCATCGCCGCCCGATGCTCCGTCTCCAACGACTGCTCCGCTACCTGTCACCGCTGAGCCGCCCCCC
CTGGTTAATGGCGATCGGTTAATGGCAGATCTCAATGCTCTGAACTTTGAGCGCTACACTACAGCCGAGTTAAAGAAAAC
GAGAGCGTTTATGGCCCAAACCCTCTCGGCATCTGGCTGGACCGTAACAGAACAGCCTTTTGAAACAGGGGTGAATCTTG
TGGCTGAACGTCCAGGTATAGCCCCTAATGCAGGGGTCTTACTAGTGGGCGCTCATTATGATTCGGTCCGAGGGTCTCCT
GGGTCAGATGATAATGCCACTGGAGTGGTGGTGGCTTTGGAAGTGGCGAGACTGCTGGGCGATCGCAAAACGATACGGCC
CCTGCGCATTGTTCTATTTGATCAAGAAGAAGCCGGACTGGTGGGTAGCTATGCCTATGCCCAACGCCCCGAAAATCTCA
AAAATTTAGACGGCGTCGTGATTTTGGAAATGCTGGGCTACTCCTGTTCGACACCGGGCTGCCAGCAGGTTCCTGGAGAA
TTCAAGGTGAAGCTACCCAGTGATAAAGGAGACTTTCTTGCGATCGCAGGCGATACAGAGCACCTACCATTACTGAATGC
CTTTAGCGAGCATCATCAGCCAAACTTACCGGCGTTAGTCCCTGTCTCCATTCCTTTTAAAGGTCTATTAACCCCTGTCA
TCCTGCGCAGTGACCATACGCCATTTTGGTTTGAAGGGATAGGAGCCGTGATGCTCACCGATACCGCCCATCTGCGCAAT
CCCCACTATCATCGGCGCACCGATACACCGGATACAGTAGATGCAGCATTCCTAACGGGCAATGCTCAAACCGCTGTTAA
TGCAATAACCGCCCTCTTAGACCGACCGCAAAGTTTCTTGACGACTGAAACCGACAAATCTTAA

Upstream 100 bases:

>100_bases
CCATTGTTTAGCTCAGTTTGAGTAGGGAACGGGTGCCAACCAAACCCTAGCCCATGTTATAAACACATCCTCTTATCGAT
TGCAGGTTTCTACAGGTGGA

Downstream 100 bases:

>100_bases
GCTTTCTCAGGATTCAGGCACTGCCTATCATTGCTCGTTTTCATGGATTAACCGTCTAACCCTCATATTTGGCTAGACTT
TCCAGCGGTAGCTGCAGCAC

Product: M28 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKGVRQWLGFSRGKMFKSRKAWILSAIACLFVVFMSCQSPRPVAQSPPVSPSPEATPAASPPDAPSPTTAPLPVTAEPPP
LVNGDRLMADLNALNFERYTTAELKKTRAFMAQTLSASGWTVTEQPFETGVNLVAERPGIAPNAGVLLVGAHYDSVRGSP
GSDDNATGVVVALEVARLLGDRKTIRPLRIVLFDQEEAGLVGSYAYAQRPENLKNLDGVVILEMLGYSCSTPGCQQVPGE
FKVKLPSDKGDFLAIAGDTEHLPLLNAFSEHHQPNLPALVPVSIPFKGLLTPVILRSDHTPFWFEGIGAVMLTDTAHLRN
PHYHRRTDTPDTVDAAFLTGNAQTAVNAITALLDRPQSFLTTETDKS

Sequences:

>Translated_367_residues
MKGVRQWLGFSRGKMFKSRKAWILSAIACLFVVFMSCQSPRPVAQSPPVSPSPEATPAASPPDAPSPTTAPLPVTAEPPP
LVNGDRLMADLNALNFERYTTAELKKTRAFMAQTLSASGWTVTEQPFETGVNLVAERPGIAPNAGVLLVGAHYDSVRGSP
GSDDNATGVVVALEVARLLGDRKTIRPLRIVLFDQEEAGLVGSYAYAQRPENLKNLDGVVILEMLGYSCSTPGCQQVPGE
FKVKLPSDKGDFLAIAGDTEHLPLLNAFSEHHQPNLPALVPVSIPFKGLLTPVILRSDHTPFWFEGIGAVMLTDTAHLRN
PHYHRRTDTPDTVDAAFLTGNAQTAVNAITALLDRPQSFLTTETDKS
>Mature_367_residues
MKGVRQWLGFSRGKMFKSRKAWILSAIACLFVVFMSCQSPRPVAQSPPVSPSPEATPAASPPDAPSPTTAPLPVTAEPPP
LVNGDRLMADLNALNFERYTTAELKKTRAFMAQTLSASGWTVTEQPFETGVNLVAERPGIAPNAGVLLVGAHYDSVRGSP
GSDDNATGVVVALEVARLLGDRKTIRPLRIVLFDQEEAGLVGSYAYAQRPENLKNLDGVVILEMLGYSCSTPGCQQVPGE
FKVKLPSDKGDFLAIAGDTEHLPLLNAFSEHHQPNLPALVPVSIPFKGLLTPVILRSDHTPFWFEGIGAVMLTDTAHLRN
PHYHRRTDTPDTVDAAFLTGNAQTAVNAITALLDRPQSFLTTETDKS

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082079, Length=355, Percent_Identity=30.4225352112676, Blast_Score=104, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71993326, Length=290, Percent_Identity=25.8620689655172, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007484 [H]

Pfam domain/function: PF04389 Peptidase_M28 [H]

EC number: NA

Molecular weight: Translated: 39542; Mature: 39542

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGVRQWLGFSRGKMFKSRKAWILSAIACLFVVFMSCQSPRPVAQSPPVSPSPEATPAAS
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PPDAPSPTTAPLPVTAEPPPLVNGDRLMADLNALNFERYTTAELKKTRAFMAQTLSASGW
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
TVTEQPFETGVNLVAERPGIAPNAGVLLVGAHYDSVRGSPGSDDNATGVVVALEVARLLG
EEECCHHHHCCHHEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
DRKTIRPLRIVLFDQEEAGLVGSYAYAQRPENLKNLDGVVILEMLGYSCSTPGCQQVPGE
CCCCCCEEEEEEECCCCCCCEECHHHHCCCCHHHHCCCEEEEEHHCCCCCCCCHHHCCCC
FKVKLPSDKGDFLAIAGDTEHLPLLNAFSEHHQPNLPALVPVSIPFKGLLTPVILRSDHT
EEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHEEECCCC
PFWFEGIGAVMLTDTAHLRNPHYHRRTDTPDTVDAAFLTGNAQTAVNAITALLDRPQSFL
CCHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHH
TTETDKS
CCCCCCC
>Mature Secondary Structure
MKGVRQWLGFSRGKMFKSRKAWILSAIACLFVVFMSCQSPRPVAQSPPVSPSPEATPAAS
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PPDAPSPTTAPLPVTAEPPPLVNGDRLMADLNALNFERYTTAELKKTRAFMAQTLSASGW
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
TVTEQPFETGVNLVAERPGIAPNAGVLLVGAHYDSVRGSPGSDDNATGVVVALEVARLLG
EEECCHHHHCCHHEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
DRKTIRPLRIVLFDQEEAGLVGSYAYAQRPENLKNLDGVVILEMLGYSCSTPGCQQVPGE
CCCCCCEEEEEEECCCCCCCEECHHHHCCCCHHHHCCCEEEEEHHCCCCCCCCHHHCCCC
FKVKLPSDKGDFLAIAGDTEHLPLLNAFSEHHQPNLPALVPVSIPFKGLLTPVILRSDHT
EEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHEEECCCC
PFWFEGIGAVMLTDTAHLRNPHYHRRTDTPDTVDAAFLTGNAQTAVNAITALLDRPQSFL
CCHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHH
TTETDKS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]