| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is yehM [H]
Identifier: 158337138
GI number: 158337138
Start: 4063500
End: 4065773
Strand: Direct
Name: yehM [H]
Synonym: AM1_4013
Alternate gene names: 158337138
Gene position: 4063500-4065773 (Clockwise)
Preceding gene: 158337133
Following gene: 158337139
Centisome position: 62.48
GC content: 52.33
Gene sequence:
>2274_bases ATGTCTACACTGCACCTGTTTGGAATTCGCCATCATGGACCTGGTTCAGCTCGGAGTTTGCGACAGAGCTTAGAAAACCT AGAGCCTGATTTGATTTTGGTAGAGGGGCCACCGGATGCGGCTGGCGTGATTGAGCAGGTCGTTAGCCCGGACATGAGTC CTCCTGTGGCTATTTTGATTTATGCACCGGAGCAACCTCAACAGGCCGTTTATTATCCCTTTGCGGTTTTTTCACCCGAA TGGCAGGCGTTAGATTATGGTTTCCAACACCAGGTCCCGGTGCAGTGGATGGACTTGCCCCAGACGCATCAACTGGCCTT GCGACAGCAGCTCGATCAACAGTATGAACCGCCTGAGGTAGAGGGCGATGCTGGGAATGTGTCTCCTGAATCGTCTCTAC CCGAAATTCGGCAGGATCCGCTGTTTTGGTTAGCCCAAGCGGCTGGATTTAATGATAGTGAACGCTGGTGGGAGCGGATG GTAGAACAGAGATCTGAAACCACCGATCTATTTCCTGCCATTGTAGAAGCGATGTCAGCACTGCGATTAGAGATGGAAAA GGATCATCCGCTAGATCTCAACAACAATCGGGATTATCGAGAAGCCTTACGAGAAGCCTACATGCGGCAAACCATCCGCA AAGCGAAGAAGGCAGGGTATGAAAAAATAGCGATTGTTTGTGGGGCTTGGCATACGCCTGCTTTAGTGGAACCTTTCCCG CCTGCTAAGCAGGATGCAGCTTTACTAAAAGGCTTACCTAAACTGAAAGTAACTTCAACCTGGATTCCCTGGACCTATGA GCGGCTGGCAGATCGCAGCGGCTATGGAGCAGGGATTGCTTCGCCGGGCTGGTATCACCACCTATGGACGGCATTGGATC AACCCACGGTTCGCTGGCTCACCCATGTTGCCCGCTTGTTGCGGCAGGCGGATGTCGATGCCTCTTCGGCTAGTGTGATT GAAGCGGTGCGGCTGGCCAATTCCCTAGCTGCACTGCGAGATTGTCCGACCCCCGGATTGTCTGAATTAAACGAAGCGGC CAAGACGGTCCTCTGCTTTGGGGAGGAACTGCCGTTGCAGCTGATTCATGAACGATTGATAATTAGCGATCGCATGGGGC AAGTTCCAGACGATACGCCGATGGTGCCTTTGCAGGTGGATTTGCAGCGTTGGCAGAAGAAGCTGCGCCTTAAACCTTCG GTTACGCCCAAAGAGCTGTCTCTGGATTTGCGAAAGCCGAATGATTTGTTGCGATCGCAACTTTTGCATCGCCTCAATTT ATTAGGGATTCCCTGGGGCCGCCCTACCTTTAGTCGAGGTAAAGGAACTTTTAAAGAAGCCTGGATATTGGAGTGGCAGC CTGAGTTTGAAATTGCCTTGATTGAAGCGGGTCAGTGGGGCAATACGATTGAGGCTGCCACGACCGCCTATACCTGTGAT CTGGCGAATAATGCCGCAAATCTGCCGATACTAACCGAGCTATTGGATCAGGTTCTCTTGGCCGATCTCCCGGACGCGAT TACCCAACTCATGGCTCGTTTGCAGGCAGAAGCAGCGGTTGCCAGTGATGTGGTGCATCTGATGTCGGCCTTACCGCCCT TGGCCCAAATCTTGCGGTATCGGGATGTGCGTCAAACGGATACAGAGGTTGTCGCCCATGTGGTGGATGGCCTAGTCACT CGCATCTGTATTGGCTTACCAGGGGCTTGCGCGTCTCTGGATGATGACGCGGCAGCCATGATGGATAAACAAATTATGGC GACCCATAGTGCCATTAATTTGTTGCAAAATCAGGACCATCAACAGATGTGGTGGATGGTGTTAAAACAACTGGTGAATC GAGAAAGTTTACATGGATTGCTGAGTGGTCGTTCCTGTCGGTTATTGCTGGATGGAGGACAGTTTGAACCATCAAGAGCG GCCCAACAGTTGAGTTTGGCGTTATCCCTAGCGACGGACCCGACCCAAGCTGCTGCCTGGATTGAAGGCTTCCTCAAGGG TAGTGGCCTGTTGTTACTCCACGATCAGGAGATTTGGCAGGTCCTGGATCAGTGGGTTTGCGAATTGGCACCAGATACCT TTGTGACGCTGTTACCGTTGTTGCGGCGGACCTTCTCAACTTTTCCGGTAGCAGAACGGCGGCAGATGGGCGAGCGAGTC ACGCAAGGAGTTGTGGAGACTGGCTTACAGGGCTGGGACTCGGAGGTATTGGATTGCGATCTCGCTGAAACGGTTTTGCC ACTTGTAGCAAAGCTCTTGGGGTTTTCGTTGTAA
Upstream 100 bases:
>100_bases AGATTTTGGTGACATGATGCTCAGTATATGATTTCACTTAGCTAATAGAAGGGGCGCTGTCAAGACGCACAGGCTGGCCC TAGGATAGATGCTCGATTCA
Downstream 100 bases:
>100_bases CTTTTTATATTGATTGAATAAAAGTAGCCTTCAAATATTTAACGAAAATCAATGTCGTGGTATAGAAAATATCTTTAATA AGATAAACCATGATAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 757; Mature: 756
Protein sequence:
>757_residues MSTLHLFGIRHHGPGSARSLRQSLENLEPDLILVEGPPDAAGVIEQVVSPDMSPPVAILIYAPEQPQQAVYYPFAVFSPE WQALDYGFQHQVPVQWMDLPQTHQLALRQQLDQQYEPPEVEGDAGNVSPESSLPEIRQDPLFWLAQAAGFNDSERWWERM VEQRSETTDLFPAIVEAMSALRLEMEKDHPLDLNNNRDYREALREAYMRQTIRKAKKAGYEKIAIVCGAWHTPALVEPFP PAKQDAALLKGLPKLKVTSTWIPWTYERLADRSGYGAGIASPGWYHHLWTALDQPTVRWLTHVARLLRQADVDASSASVI EAVRLANSLAALRDCPTPGLSELNEAAKTVLCFGEELPLQLIHERLIISDRMGQVPDDTPMVPLQVDLQRWQKKLRLKPS VTPKELSLDLRKPNDLLRSQLLHRLNLLGIPWGRPTFSRGKGTFKEAWILEWQPEFEIALIEAGQWGNTIEAATTAYTCD LANNAANLPILTELLDQVLLADLPDAITQLMARLQAEAAVASDVVHLMSALPPLAQILRYRDVRQTDTEVVAHVVDGLVT RICIGLPGACASLDDDAAAMMDKQIMATHSAINLLQNQDHQQMWWMVLKQLVNRESLHGLLSGRSCRLLLDGGQFEPSRA AQQLSLALSLATDPTQAAAWIEGFLKGSGLLLLHDQEIWQVLDQWVCELAPDTFVTLLPLLRRTFSTFPVAERRQMGERV TQGVVETGLQGWDSEVLDCDLAETVLPLVAKLLGFSL
Sequences:
>Translated_757_residues MSTLHLFGIRHHGPGSARSLRQSLENLEPDLILVEGPPDAAGVIEQVVSPDMSPPVAILIYAPEQPQQAVYYPFAVFSPE WQALDYGFQHQVPVQWMDLPQTHQLALRQQLDQQYEPPEVEGDAGNVSPESSLPEIRQDPLFWLAQAAGFNDSERWWERM VEQRSETTDLFPAIVEAMSALRLEMEKDHPLDLNNNRDYREALREAYMRQTIRKAKKAGYEKIAIVCGAWHTPALVEPFP PAKQDAALLKGLPKLKVTSTWIPWTYERLADRSGYGAGIASPGWYHHLWTALDQPTVRWLTHVARLLRQADVDASSASVI EAVRLANSLAALRDCPTPGLSELNEAAKTVLCFGEELPLQLIHERLIISDRMGQVPDDTPMVPLQVDLQRWQKKLRLKPS VTPKELSLDLRKPNDLLRSQLLHRLNLLGIPWGRPTFSRGKGTFKEAWILEWQPEFEIALIEAGQWGNTIEAATTAYTCD LANNAANLPILTELLDQVLLADLPDAITQLMARLQAEAAVASDVVHLMSALPPLAQILRYRDVRQTDTEVVAHVVDGLVT RICIGLPGACASLDDDAAAMMDKQIMATHSAINLLQNQDHQQMWWMVLKQLVNRESLHGLLSGRSCRLLLDGGQFEPSRA AQQLSLALSLATDPTQAAAWIEGFLKGSGLLLLHDQEIWQVLDQWVCELAPDTFVTLLPLLRRTFSTFPVAERRQMGERV TQGVVETGLQGWDSEVLDCDLAETVLPLVAKLLGFSL >Mature_756_residues STLHLFGIRHHGPGSARSLRQSLENLEPDLILVEGPPDAAGVIEQVVSPDMSPPVAILIYAPEQPQQAVYYPFAVFSPEW QALDYGFQHQVPVQWMDLPQTHQLALRQQLDQQYEPPEVEGDAGNVSPESSLPEIRQDPLFWLAQAAGFNDSERWWERMV EQRSETTDLFPAIVEAMSALRLEMEKDHPLDLNNNRDYREALREAYMRQTIRKAKKAGYEKIAIVCGAWHTPALVEPFPP AKQDAALLKGLPKLKVTSTWIPWTYERLADRSGYGAGIASPGWYHHLWTALDQPTVRWLTHVARLLRQADVDASSASVIE AVRLANSLAALRDCPTPGLSELNEAAKTVLCFGEELPLQLIHERLIISDRMGQVPDDTPMVPLQVDLQRWQKKLRLKPSV TPKELSLDLRKPNDLLRSQLLHRLNLLGIPWGRPTFSRGKGTFKEAWILEWQPEFEIALIEAGQWGNTIEAATTAYTCDL ANNAANLPILTELLDQVLLADLPDAITQLMARLQAEAAVASDVVHLMSALPPLAQILRYRDVRQTDTEVVAHVVDGLVTR ICIGLPGACASLDDDAAAMMDKQIMATHSAINLLQNQDHQQMWWMVLKQLVNRESLHGLLSGRSCRLLLDGGQFEPSRAA QQLSLALSLATDPTQAAAWIEGFLKGSGLLLLHDQEIWQVLDQWVCELAPDTFVTLLPLLRRTFSTFPVAERRQMGERVT QGVVETGLQGWDSEVLDCDLAETVLPLVAKLLGFSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788439, Length=532, Percent_Identity=28.7593984962406, Blast_Score=138, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84592; Mature: 84461
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLHLFGIRHHGPGSARSLRQSLENLEPDLILVEGPPDAAGVIEQVVSPDMSPPVAILI CCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEE YAPEQPQQAVYYPFAVFSPEWQALDYGFQHQVPVQWMDLPQTHQLALRQQLDQQYEPPEV ECCCCCCCEEEEEEEEECCCHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCC EGDAGNVSPESSLPEIRQDPLFWLAQAAGFNDSERWWERMVEQRSETTDLFPAIVEAMSA CCCCCCCCCCCCCCHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH LRLEMEKDHPLDLNNNRDYREALREAYMRQTIRKAKKAGYEKIAIVCGAWHTPALVEPFP HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC PAKQDAALLKGLPKLKVTSTWIPWTYERLADRSGYGAGIASPGWYHHLWTALDQPTVRWL CCCHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHH THVARLLRQADVDASSASVIEAVRLANSLAALRDCPTPGLSELNEAAKTVLCFGEELPLQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH LIHERLIISDRMGQVPDDTPMVPLQVDLQRWQKKLRLKPSVTPKELSLDLRKPNDLLRSQ HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHH LLHRLNLLGIPWGRPTFSRGKGTFKEAWILEWQPEFEIALIEAGQWGNTIEAATTAYTCD HHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHEEEEE LANNAANLPILTELLDQVLLADLPDAITQLMARLQAEAAVASDVVHLMSALPPLAQILRY CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH RDVRQTDTEVVAHVVDGLVTRICIGLPGACASLDDDAAAMMDKQIMATHSAINLLQNQDH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH QQMWWMVLKQLVNRESLHGLLSGRSCRLLLDGGQFEPSRAAQQLSLALSLATDPTQAAAW HHHHHHHHHHHHCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHH IEGFLKGSGLLLLHDQEIWQVLDQWVCELAPDTFVTLLPLLRRTFSTFPVAERRQMGERV HHHHHCCCCEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TQGVVETGLQGWDSEVLDCDLAETVLPLVAKLLGFSL HHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure STLHLFGIRHHGPGSARSLRQSLENLEPDLILVEGPPDAAGVIEQVVSPDMSPPVAILI CCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEE YAPEQPQQAVYYPFAVFSPEWQALDYGFQHQVPVQWMDLPQTHQLALRQQLDQQYEPPEV ECCCCCCCEEEEEEEEECCCHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCC EGDAGNVSPESSLPEIRQDPLFWLAQAAGFNDSERWWERMVEQRSETTDLFPAIVEAMSA CCCCCCCCCCCCCCHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH LRLEMEKDHPLDLNNNRDYREALREAYMRQTIRKAKKAGYEKIAIVCGAWHTPALVEPFP HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC PAKQDAALLKGLPKLKVTSTWIPWTYERLADRSGYGAGIASPGWYHHLWTALDQPTVRWL CCCHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHH THVARLLRQADVDASSASVIEAVRLANSLAALRDCPTPGLSELNEAAKTVLCFGEELPLQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH LIHERLIISDRMGQVPDDTPMVPLQVDLQRWQKKLRLKPSVTPKELSLDLRKPNDLLRSQ HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHH LLHRLNLLGIPWGRPTFSRGKGTFKEAWILEWQPEFEIALIEAGQWGNTIEAATTAYTCD HHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHEEEEE LANNAANLPILTELLDQVLLADLPDAITQLMARLQAEAAVASDVVHLMSALPPLAQILRY CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH RDVRQTDTEVVAHVVDGLVTRICIGLPGACASLDDDAAAMMDKQIMATHSAINLLQNQDH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH QQMWWMVLKQLVNRESLHGLLSGRSCRLLLDGGQFEPSRAAQQLSLALSLATDPTQAAAW HHHHHHHHHHHHCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHH IEGFLKGSGLLLLHDQEIWQVLDQWVCELAPDTFVTLLPLLRRTFSTFPVAERRQMGERV HHHHHCCCCEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TQGVVETGLQGWDSEVLDCDLAETVLPLVAKLLGFSL HHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]