| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is menH [H]
Identifier: 158337137
GI number: 158337137
Start: 4062638
End: 4063414
Strand: Reverse
Name: menH [H]
Synonym: AM1_4012
Alternate gene names: 158337137
Gene position: 4063414-4062638 (Counterclockwise)
Preceding gene: 158337144
Following gene: 158337136
Centisome position: 62.48
GC content: 42.6
Gene sequence:
>777_bases ATGTCACCAAAATCTATTGTGCCGTCTGATGTTGGGTTATGGATGATTCATGGCAATCTCCAAACCCCTAAAGTATGGCA CCCCATCACAACGCAACTTCATCAAGCGGTCAGGCCCAAGCTCAACCTATCCATTTTCTTGGAAGATCTATGGACCAGTC CAGGAGACTCTTTAGAGGAATGGGCAGCTCTATTTTGTCAACGCGTTCACACCCATCACTTTAAGTCTCGTTTCTTACTG GGTTATTCCTTGGGCGGTCGGTTAGCTTTTCATGCGCTGCTACATCGACCTGAATTATGGCAAGGAGCGATCATTATCAG TGCTGACTCGGGGTTGGAATCAGAGTGCGATCGCAACCGCTGTCTCCAAAGAGATAAAGCTTGGAGCAACAAATTTCTGC ATGATAAGTGGGAAAACCTGATGCAGGAGTGGAATTCACTCTCCGTATTCTGTGGACGCCAGCCTACCTATTCAGTCTTA GAAAAAGATTTTTCTCGCATTAAACTCTCACAGATATTTCAGATCTTCTCCAAGGGACACCAAAGCAATCTCCTCCCAAA TTTACAAACTCTCAACGCACCAATTTTGTATATATCAGGGTCAGAAGACATGCATTATTGCCAAATTGGCCAAAAGCTAG ATCGTCATTGTTTATCAATCAATCATCGCATTATTTTAAATGCTGGGCATCGTGTTCCCTGGGAGAAAAAAAATTCATTC TTACTAGTCTTAACTCATTTTTTAACCAGAGGTTATAATACTCAAAAAGCAAACTGA
Upstream 100 bases:
>100_bases GTGCAGTGTAGACATTGAATCGAGCATCTATCCTAGGGCCAGCCTGTGCGTCTTGACAGCGCCCCTTCTATTAGCTAAGT GAAATCATATACTGAGCATC
Downstream 100 bases:
>100_bases GACAGGATTACATAATTCCATTATCCAGATTTATTTACTGAAGCAAGCATCAAGCGAATAAAGTTTATAGCCAACAGAGC CAAGCAATATTTTAAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: SHCHC synthase [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSPKSIVPSDVGLWMIHGNLQTPKVWHPITTQLHQAVRPKLNLSIFLEDLWTSPGDSLEEWAALFCQRVHTHHFKSRFLL GYSLGGRLAFHALLHRPELWQGAIIISADSGLESECDRNRCLQRDKAWSNKFLHDKWENLMQEWNSLSVFCGRQPTYSVL EKDFSRIKLSQIFQIFSKGHQSNLLPNLQTLNAPILYISGSEDMHYCQIGQKLDRHCLSINHRIILNAGHRVPWEKKNSF LLVLTHFLTRGYNTQKAN
Sequences:
>Translated_258_residues MSPKSIVPSDVGLWMIHGNLQTPKVWHPITTQLHQAVRPKLNLSIFLEDLWTSPGDSLEEWAALFCQRVHTHHFKSRFLL GYSLGGRLAFHALLHRPELWQGAIIISADSGLESECDRNRCLQRDKAWSNKFLHDKWENLMQEWNSLSVFCGRQPTYSVL EKDFSRIKLSQIFQIFSKGHQSNLLPNLQTLNAPILYISGSEDMHYCQIGQKLDRHCLSINHRIILNAGHRVPWEKKNSF LLVLTHFLTRGYNTQKAN >Mature_257_residues SPKSIVPSDVGLWMIHGNLQTPKVWHPITTQLHQAVRPKLNLSIFLEDLWTSPGDSLEEWAALFCQRVHTHHFKSRFLLG YSLGGRLAFHALLHRPELWQGAIIISADSGLESECDRNRCLQRDKAWSNKFLHDKWENLMQEWNSLSVFCGRQPTYSVLE KDFSRIKLSQIFQIFSKGHQSNLLPNLQTLNAPILYISGSEDMHYCQIGQKLDRHCLSINHRIILNAGHRVPWEKKNSFL LVLTHFLTRGYNTQKAN
Specific function: Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). Is also
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MenH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR022485 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =4.2.99.20 [H]
Molecular weight: Translated: 29875; Mature: 29743
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKSIVPSDVGLWMIHGNLQTPKVWHPITTQLHQAVRPKLNLSIFLEDLWTSPGDSLEE CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHCCCCCCCHHH WAALFCQRVHTHHFKSRFLLGYSLGGRLAFHALLHRPELWQGAIIISADSGLESECDRNR HHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH CLQRDKAWSNKFLHDKWENLMQEWNSLSVFCGRQPTYSVLEKDFSRIKLSQIFQIFSKGH HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC QSNLLPNLQTLNAPILYISGSEDMHYCQIGQKLDRHCLSINHRIILNAGHRVPWEKKNSF CCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCE LLVLTHFLTRGYNTQKAN EHHHHHHHHCCCCCCCCC >Mature Secondary Structure SPKSIVPSDVGLWMIHGNLQTPKVWHPITTQLHQAVRPKLNLSIFLEDLWTSPGDSLEE CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHCCCCCCCHHH WAALFCQRVHTHHFKSRFLLGYSLGGRLAFHALLHRPELWQGAIIISADSGLESECDRNR HHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH CLQRDKAWSNKFLHDKWENLMQEWNSLSVFCGRQPTYSVLEKDFSRIKLSQIFQIFSKGH HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC QSNLLPNLQTLNAPILYISGSEDMHYCQIGQKLDRHCLSINHRIILNAGHRVPWEKKNSF CCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCE LLVLTHFLTRGYNTQKAN EHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA