Click here to switch to the map view.

The map label for this gene is 158336987

Identifier: 158336987

GI number: 158336987

Start: 3911588

End: 3912517

Strand: Direct

Name: 158336987

Synonym: AM1_3860

Alternate gene names: NA

Gene position: 3911588-3912517 (Clockwise)

Preceding gene: 158336986

Following gene: 158336992

Centisome position: 60.14

GC content: 48.49

Gene sequence:

>930_bases
ATGAGTTACCAAATCCGCAACTGGTCCGAGTATAACGCTGGTCTCAAACAGCGGGGAAGTGTGACCTTCTGGCTCGAACA
ATCAGCTATCGTTCATTGGCTAGAAACCACACCGAGACAAAAGCGGGGAGCCTCTCTGACCTATAGCGATACAGCAATCT
CCACCTTCGAGACCGTCAAATGTATCTATGGTTTAGCAGGGCGTCAAACCGAAGGATTTCTAAATTCATTGTTTGAGTTG
ATGGGAATTGAGCTTCCCGTTTGTGACCACAGCACCGTCTCTCGGCGGAAAGGTCAGCTATCGATTTCATTGCCCGTTAT
ACCTAAGCAAGGTGCCATTCACGTCGTTATCGATAGCACAGGGGTCAAAGTCTATGGTGAAGGAGAGTGGAAAACCAGGC
AACATGGTGTGAGCAAACGTCGGACGTGGCGTAAACTTCACTTGAGTGTTGATGAGTCCACTGGAGAAATTCTCACGGGT
GTCGTGACAACCAATGACGTTCAGGATGGTGAAGTGTTTGAAGATCTCCTTGAAGGCATCGACGATGAGATTGAACAGGT
CTCTGCTGACGGAGCCTATGACCAAAGTCATTGCTATGATGCCCTCATGGAGCGCAATGCCACAGCTGCAATTCCCCCAA
GGAAGAATGCCAAAATTTGGCAACATGGAAACTGCAATGCTCCACCCCATCCACGAGATCAAAATCTCAGAGCCATCCGA
AAACAGGGACGAAAGAGGTGGAAAAAACAAGCCCACTATCATCGGCGGTCTCTAGCTGAAACGACGATGTTTCGCTTCAA
AACTATCTTTGGGGGTCAGGTACGTTCCCGTAACTTTGATAATCAAGCCACAGAGTTACTCCTGCAGTGTGCGGCACTCA
ATCGAATGATTCAGATCGCCAAACCCGAGACTGTTTGGGTTGAAGCTTAA

Upstream 100 bases:

>100_bases
GGTTGTGCTGTCTTTCGCTGGTCATTGGCGTTGTTGCATGAATAGGTGCTGCGGATTAGGCGCGGGCTAGAGTTTATGTA
CCACCAAAAACCGCTAGCCC

Downstream 100 bases:

>100_bases
GAATAACGAGGAGAGGCAATTCATCTAGCCTTTACGCGATTCATGCAACAAAGCCCTGGTCATTTCCAAAGCCGAAAGTT
GGACTTTCCAAGCCCCGCCA

Product: IS4 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSYQIRNWSEYNAGLKQRGSVTFWLEQSAIVHWLETTPRQKRGASLTYSDTAISTFETVKCIYGLAGRQTEGFLNSLFEL
MGIELPVCDHSTVSRRKGQLSISLPVIPKQGAIHVVIDSTGVKVYGEGEWKTRQHGVSKRRTWRKLHLSVDESTGEILTG
VVTTNDVQDGEVFEDLLEGIDDEIEQVSADGAYDQSHCYDALMERNATAAIPPRKNAKIWQHGNCNAPPHPRDQNLRAIR
KQGRKRWKKQAHYHRRSLAETTMFRFKTIFGGQVRSRNFDNQATELLLQCAALNRMIQIAKPETVWVEA

Sequences:

>Translated_309_residues
MSYQIRNWSEYNAGLKQRGSVTFWLEQSAIVHWLETTPRQKRGASLTYSDTAISTFETVKCIYGLAGRQTEGFLNSLFEL
MGIELPVCDHSTVSRRKGQLSISLPVIPKQGAIHVVIDSTGVKVYGEGEWKTRQHGVSKRRTWRKLHLSVDESTGEILTG
VVTTNDVQDGEVFEDLLEGIDDEIEQVSADGAYDQSHCYDALMERNATAAIPPRKNAKIWQHGNCNAPPHPRDQNLRAIR
KQGRKRWKKQAHYHRRSLAETTMFRFKTIFGGQVRSRNFDNQATELLLQCAALNRMIQIAKPETVWVEA
>Mature_308_residues
SYQIRNWSEYNAGLKQRGSVTFWLEQSAIVHWLETTPRQKRGASLTYSDTAISTFETVKCIYGLAGRQTEGFLNSLFELM
GIELPVCDHSTVSRRKGQLSISLPVIPKQGAIHVVIDSTGVKVYGEGEWKTRQHGVSKRRTWRKLHLSVDESTGEILTGV
VTTNDVQDGEVFEDLLEGIDDEIEQVSADGAYDQSHCYDALMERNATAAIPPRKNAKIWQHGNCNAPPHPRDQNLRAIRK
QGRKRWKKQAHYHRRSLAETTMFRFKTIFGGQVRSRNFDNQATELLLQCAALNRMIQIAKPETVWVEA

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 35113; Mature: 34982

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQIRNWSEYNAGLKQRGSVTFWLEQSAIVHWLETTPRQKRGASLTYSDTAISTFETVK
CCCCCCCCHHHCCCHHHCCCEEEEEECCHHHHHHHCCCCHHCCCEEEECCCHHHHHHHHH
CIYGLAGRQTEGFLNSLFELMGIELPVCDHSTVSRRKGQLSISLPVIPKQGAIHVVIDST
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCEEEEEECC
GVKVYGEGEWKTRQHGVSKRRTWRKLHLSVDESTGEILTGVVTTNDVQDGEVFEDLLEGI
CEEEEECCCCCHHHHCHHHHHHEEHEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHH
DDEIEQVSADGAYDQSHCYDALMERNATAAIPPRKNAKIWQHGNCNAPPHPRDQNLRAIR
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH
KQGRKRWKKQAHYHRRSLAETTMFRFKTIFGGQVRSRNFDNQATELLLQCAALNRMIQIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHEEC
KPETVWVEA
CCCEEEEEC
>Mature Secondary Structure 
SYQIRNWSEYNAGLKQRGSVTFWLEQSAIVHWLETTPRQKRGASLTYSDTAISTFETVK
CCCCCCCHHHCCCHHHCCCEEEEEECCHHHHHHHCCCCHHCCCEEEECCCHHHHHHHHH
CIYGLAGRQTEGFLNSLFELMGIELPVCDHSTVSRRKGQLSISLPVIPKQGAIHVVIDST
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCEEEEEECC
GVKVYGEGEWKTRQHGVSKRRTWRKLHLSVDESTGEILTGVVTTNDVQDGEVFEDLLEGI
CEEEEECCCCCHHHHCHHHHHHEEHEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHH
DDEIEQVSADGAYDQSHCYDALMERNATAAIPPRKNAKIWQHGNCNAPPHPRDQNLRAIR
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH
KQGRKRWKKQAHYHRRSLAETTMFRFKTIFGGQVRSRNFDNQATELLLQCAALNRMIQIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHEEC
KPETVWVEA
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]