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The map label for this gene is ycgR [H]

Identifier: 158336975

GI number: 158336975

Start: 3901789

End: 3902811

Strand: Reverse

Name: ycgR [H]

Synonym: AM1_3848

Alternate gene names: 158336975

Gene position: 3902811-3901789 (Counterclockwise)

Preceding gene: 158336979

Following gene: 158336974

Centisome position: 60.01

GC content: 48.68

Gene sequence:

>1023_bases
ATGTCCCAATTGGGTAGTGGATTAACCCTATTTCTAAGCCTCATGGTTGAGGCCATGCCATTTTTGATTTTTGGTGTGTT
GGTCTCGGGGGTGCTGCTGATTTTTATTGATGAGAAGCGGCTAATTGCCATGTTCCCCAAGAATCCATTGTTGGGTGCCC
TCTCGGGCAGCCTATTTGGCTTTTTATTCCCTGTCTGTGAATGTGGAAATGTCCCCGTTGCTCGACGCTTATTGATTCAA
GGGGCATCTGCTCCCGTGGCGATTGGCTTTTTGCTCGCGGCGCCAACTATCAATCCTGTGGTGATTTGGGCGACGTGGAC
CGCATTCCCAGATCAGCCTGAAATTGTGGTTTTGCGAGTCGTGTTTTCCTTTGCGATCGCAACCATTATCGGTTGGGTAT
TTAGCTGGCAATCGGATCTCAAACCCTTCTTGCAGCCCAACATCGCGACCCTAATGCCTGTCCCATCCAGCGCATCTCCA
GCAGAATCGACAGAGTCTTCAAGCTTTTTAAAAGCTGGCACCTACTTCCTCGATCAACCCAGCAATCCCATTGCCTTAGA
GGCTGCCAACTTGGATGCCGTTATGGCCATCGCTTCCCCTCAGCCCAAATCCCTATGGGACAAGCTGCCGCTCTTGTTAG
ACAACACCATTCAAGAATTACGAGAAATGGGGGGTGTCTTAGTGCTGGGCAGCTTGCTTGCAACCATTATTCAAATATCA
GTCCCCCGCAATATCATCCTCGCCATTGGTCAAGGCCCGGTGACTTCGGTGTTTGCCATGGTGATTTTAGGAGGTATCAT
CTCCATCTGTTCGACTGTAGATGCATTTTTTGCCCTTTCGTTCGCCTCTACCTTTACCAGTGGTGCTCTCCTCGCCTTTC
TCGTTTTCGGCCCCATGTTTGACCTGAAAAGTATGGGCTTATTATTAATGGTCTTTAAACCCCGGGCTGTTTTTTACATC
TTTGCCATGGTCTTTCAACTCACCTTGGTGTTTACCCTGATCATTAATCTGTGGATTAGTTAG

Upstream 100 bases:

>100_bases
TAGATACTGATGCTGAGATGCAAACGTTAGCCAGTCACACTTCAATTTTTAATTCTAGCCGTTCATCCTGTTAGACACTC
ACTGTATAGGAAGCCTGCGA

Downstream 100 bases:

>100_bases
AGACAGGCTCTATGACAGCAAAACGTATACGCACTAGACTGCTCCCTTACCTATCCGAAGGATTGGCCACTTTGGCCCTC
TGCCTATGGGGTATTTTAAT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSQLGSGLTLFLSLMVEAMPFLIFGVLVSGVLLIFIDEKRLIAMFPKNPLLGALSGSLFGFLFPVCECGNVPVARRLLIQ
GASAPVAIGFLLAAPTINPVVIWATWTAFPDQPEIVVLRVVFSFAIATIIGWVFSWQSDLKPFLQPNIATLMPVPSSASP
AESTESSSFLKAGTYFLDQPSNPIALEAANLDAVMAIASPQPKSLWDKLPLLLDNTIQELREMGGVLVLGSLLATIIQIS
VPRNIILAIGQGPVTSVFAMVILGGIISICSTVDAFFALSFASTFTSGALLAFLVFGPMFDLKSMGLLLMVFKPRAVFYI
FAMVFQLTLVFTLIINLWIS

Sequences:

>Translated_340_residues
MSQLGSGLTLFLSLMVEAMPFLIFGVLVSGVLLIFIDEKRLIAMFPKNPLLGALSGSLFGFLFPVCECGNVPVARRLLIQ
GASAPVAIGFLLAAPTINPVVIWATWTAFPDQPEIVVLRVVFSFAIATIIGWVFSWQSDLKPFLQPNIATLMPVPSSASP
AESTESSSFLKAGTYFLDQPSNPIALEAANLDAVMAIASPQPKSLWDKLPLLLDNTIQELREMGGVLVLGSLLATIIQIS
VPRNIILAIGQGPVTSVFAMVILGGIISICSTVDAFFALSFASTFTSGALLAFLVFGPMFDLKSMGLLLMVFKPRAVFYI
FAMVFQLTLVFTLIINLWIS
>Mature_339_residues
SQLGSGLTLFLSLMVEAMPFLIFGVLVSGVLLIFIDEKRLIAMFPKNPLLGALSGSLFGFLFPVCECGNVPVARRLLIQG
ASAPVAIGFLLAAPTINPVVIWATWTAFPDQPEIVVLRVVFSFAIATIIGWVFSWQSDLKPFLQPNIATLMPVPSSASPA
ESTESSSFLKAGTYFLDQPSNPIALEAANLDAVMAIASPQPKSLWDKLPLLLDNTIQELREMGGVLVLGSLLATIIQISV
PRNIILAIGQGPVTSVFAMVILGGIISICSTVDAFFALSFASTFTSGALLAFLVFGPMFDLKSMGLLLMVFKPRAVFYIF
AMVFQLTLVFTLIINLWIS

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 36569; Mature: 36438

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLGSGLTLFLSLMVEAMPFLIFGVLVSGVLLIFIDEKRLIAMFPKNPLLGALSGSLFG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHHHHH
FLFPVCECGNVPVARRLLIQGASAPVAIGFLLAAPTINPVVIWATWTAFPDQPEIVVLRV
HHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHH
VFSFAIATIIGWVFSWQSDLKPFLQPNIATLMPVPSSASPAESTESSSFLKAGTYFLDQP
HHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHCCEEECCC
SNPIALEAANLDAVMAIASPQPKSLWDKLPLLLDNTIQELREMGGVLVLGSLLATIIQIS
CCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
VPRNIILAIGQGPVTSVFAMVILGGIISICSTVDAFFALSFASTFTSGALLAFLVFGPMF
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DLKSMGLLLMVFKPRAVFYIFAMVFQLTLVFTLIINLWIS
HHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQLGSGLTLFLSLMVEAMPFLIFGVLVSGVLLIFIDEKRLIAMFPKNPLLGALSGSLFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHHHHH
FLFPVCECGNVPVARRLLIQGASAPVAIGFLLAAPTINPVVIWATWTAFPDQPEIVVLRV
HHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHH
VFSFAIATIIGWVFSWQSDLKPFLQPNIATLMPVPSSASPAESTESSSFLKAGTYFLDQP
HHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHCCEEECCC
SNPIALEAANLDAVMAIASPQPKSLWDKLPLLLDNTIQELREMGGVLVLGSLLATIIQIS
CCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
VPRNIILAIGQGPVTSVFAMVILGGIISICSTVDAFFALSFASTFTSGALLAFLVFGPMF
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DLKSMGLLLMVFKPRAVFYIFAMVFQLTLVFTLIINLWIS
HHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]