Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158336962

Identifier: 158336962

GI number: 158336962

Start: 3884228

End: 3885535

Strand: Direct

Name: 158336962

Synonym: AM1_3835

Alternate gene names: NA

Gene position: 3884228-3885535 (Clockwise)

Preceding gene: 158336960

Following gene: 158336966

Centisome position: 59.72

GC content: 48.85

Gene sequence:

>1308_bases
ATGCAACACCAACTAACCACCACCAAGTTTCAGCCTTCTAAAGTAGCCCAGGTACTGCGAAACGCAACCAGCGCAACCTT
GGGAGCCATGGTTCTCACAAGTCTAGTCCCCTCACCTGCTGCTGCTCTTTCTGGTCAAAAAACCATCCCAGCATCAAGGG
TTGCCCAAATAATGAACGGCACCTTGACAGACGCTAAAATTCGTCTCAACAACGTGGATCTGAATGGCTATGGTCGCTAC
CTCAAAGACGATTGGTATAAACCTAATGATTCCTATTTCCAATTTATGGGCAGAAAACAGTCTATTTCGCTCCAGCATTG
GACAGGTAGACGGGAAAAAGGTCATATGCGTTGGTATTACTACATCAATAATGTCAACACAGAAGCGGTGACGCTACGTC
ACGAAAACAATCGCTATGTGTTCCGAGCATTCTTCGAAAGTCGCGATCGTGAAATTAAAGGACTGTGCCGCTGGAAGAAA
GCAGTAGGCAAAAACAAAGGGAAATATACCCAGTGCAAACCCAGTGGTAATGATCGCCCCGCTCCCGATGGTGATTTTAA
CCATGCCAAGGTGCAAATCGCTCTCAAACCTGTAGTTCGCAACGGCGGGATTATCCTCACGGTGCCTCAGCGAAGCAATG
TCAAAATTGGCGGCGATTTACAAATCCAAGGTGTTCTCGGTTGGTTTAACAAGATTGAGGACGCCATCGAGAACTATGGC
AAACGCAAAGTGGGCGATGCGATCTACCATGCATTCCAAGATCCTCAACGACAGGCAACGATGCAACAACGCACGGCCAA
TGCCATTAGCCGATTAAATGCTTTTGCTAGATTCGCAAATGTACGGCCCGTCAGGTTCAAGCCCAACGGTGATTTGGTGG
TGGCCTACGACATCAAAGTCGATAAAAGTATGGTGTCAACCGTCCTCCAGCAAGTGAAGCATCCTCGCCAGGGTAAGGCT
TGTAAGGGCACGATGGACCTCAAAGCACGGTTTAAATCCCAGTATCCAGCTAAACTCACCTATCAATTTGAAGGCGAGAA
TGGGGCACTCAGCCCTAAGCAAACCCTCACGCTGGCAAGTAAAACCCCCAAAACCATCACCCTAAAGCGCAGAACAGGTG
GACCAGGGACAACTAAGCAAATTGTCCAACTGCCGAAGCGCGGCAAGCGCCTCAGGGTGTCAGGGAAAAGTCGTGCCCAT
TGGTCATTTGTCATCGATGGCCAACGAGTCTCAGGCAAAACCCCTTGGAAACCCTATTCCATCTATTGCCCTATTCCTCA
ACAATCGCCAGGCGGATTCAAGTCTTAA

Upstream 100 bases:

>100_bases
CTGAGGCCAAATTTTTTACAGAGTCCCTGCATATCAATCCAAAAACAAACCTAACAGTTGAGTAAGGTCAACCACCATCC
AATCAACTTAGGAAACCGTT

Downstream 100 bases:

>100_bases
TCAGGAAGGTGAACGCCACCTTCTCAAGGGATTCTCACTTATCTTGATCAATTGATGGCTGTAGCTGTGGGTATTTTGCC
TACAGCTACAATTTTCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNGTLTDAKIRLNNVDLNGYGRY
LKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYYYINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKK
AVGKNKGKYTQCKPSGNDRPAPDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG
KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKVDKSMVSTVLQQVKHPRQGKA
CKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLASKTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAH
WSFVIDGQRVSGKTPWKPYSIYCPIPQQSPGGFKS

Sequences:

>Translated_435_residues
MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNGTLTDAKIRLNNVDLNGYGRY
LKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYYYINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKK
AVGKNKGKYTQCKPSGNDRPAPDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG
KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKVDKSMVSTVLQQVKHPRQGKA
CKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLASKTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAH
WSFVIDGQRVSGKTPWKPYSIYCPIPQQSPGGFKS
>Mature_435_residues
MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNGTLTDAKIRLNNVDLNGYGRY
LKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYYYINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKK
AVGKNKGKYTQCKPSGNDRPAPDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG
KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKVDKSMVSTVLQQVKHPRQGKA
CKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLASKTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAH
WSFVIDGQRVSGKTPWKPYSIYCPIPQQSPGGFKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48988; Mature: 48988

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCC
TLTDAKIRLNNVDLNGYGRYLKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYY
CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCEEEEE
YINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKKAVGKNKGKYTQCKPSGNDRP
EEECCCCEEEEEEECCCCEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
APDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG
CCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEECCCEEEEHHHHHHHHHHHHHHHCC
KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKV
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEE
DKSMVSTVLQQVKHPRQGKACKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLAS
CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHEEEEEC
KTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAHWSFVIDGQRVSGKTPWKPYS
CCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEECCEECCCCCCCCEE
IYCPIPQQSPGGFKS
EEECCCCCCCCCCCC
>Mature Secondary Structure
MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCC
TLTDAKIRLNNVDLNGYGRYLKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYY
CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCEEEEE
YINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKKAVGKNKGKYTQCKPSGNDRP
EEECCCCEEEEEEECCCCEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
APDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG
CCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEECCCEEEEHHHHHHHHHHHHHHHCC
KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKV
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEE
DKSMVSTVLQQVKHPRQGKACKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLAS
CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHEEEEEC
KTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAHWSFVIDGQRVSGKTPWKPYS
CCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEECCEECCCCCCCCEE
IYCPIPQQSPGGFKS
EEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA