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The map label for this gene is psbQ

Identifier: 158336924

GI number: 158336924

Start: 3848887

End: 3849336

Strand: Reverse

Name: psbQ

Synonym: AM1_3795

Alternate gene names: NA

Gene position: 3849336-3848887 (Counterclockwise)

Preceding gene: 158336925

Following gene: 158336923

Centisome position: 59.19

GC content: 45.33

Gene sequence:

>450_bases
ATGATCTTAAATTTTAAACGATTTTGTAAATCCCTATTGGCCGTTGCCTTTGCAACTGCCCTTGTTTTGACAAGTTTTAG
CACAATTGCCCCTACTGCTTTAGCTGGGTCTAATACTGGAATTGTTATTGCTCAAGCTTCTAAATATACAGAAGGACTAC
AACCACTGTATGGGCGCCTATCTGAGCTAGAAGGATACGTTTCTGAAGGCGACTGGAACAATGTTCGCACCTTTATCCGT
GGTCCCCTTGGTGAGCTCGGTCCCCTCTCTCGTCGTTTGGGTGATTCATTGCCTGCTGCAACACAAAAGAGTGGTCGTCG
CACCATCAAATTGTTAGCTGACCACCTCAACAAGCTAGATGCTGCTGCTGCTAAGCGTAATTCCACCACTGCTGCTAAAG
AGTATGATGCCGTTGTGTCTGCTTTTGATGCTGTTCTAGGTTTGTCCTAA

Upstream 100 bases:

>100_bases
AAAGCAGGGCTTTACAGGTGATTAGCTTTACAAAGGCCCCTGAAAATTCGACAATAAATCTTGGCAAACCCATTTCTGAT
GCGCAGAGGACTGTGAATCA

Downstream 100 bases:

>100_bases
ATCTAGTCGTTCAAGCCAATTGTTGTTAAAGGGTGTCACGCAGCGCTCGCGAAGATCCACAAGCGTATCAATTGCAGGTT
ACATGCTGAATGATGCGATC

Product: photosystem II protein PsbQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MILNFKRFCKSLLAVAFATALVLTSFSTIAPTALAGSNTGIVIAQASKYTEGLQPLYGRLSELEGYVSEGDWNNVRTFIR
GPLGELGPLSRRLGDSLPAATQKSGRRTIKLLADHLNKLDAAAAKRNSTTAAKEYDAVVSAFDAVLGLS

Sequences:

>Translated_149_residues
MILNFKRFCKSLLAVAFATALVLTSFSTIAPTALAGSNTGIVIAQASKYTEGLQPLYGRLSELEGYVSEGDWNNVRTFIR
GPLGELGPLSRRLGDSLPAATQKSGRRTIKLLADHLNKLDAAAAKRNSTTAAKEYDAVVSAFDAVLGLS
>Mature_149_residues
MILNFKRFCKSLLAVAFATALVLTSFSTIAPTALAGSNTGIVIAQASKYTEGLQPLYGRLSELEGYVSEGDWNNVRTFIR
GPLGELGPLSRRLGDSLPAATQKSGRRTIKLLADHLNKLDAAAAKRNSTTAAKEYDAVVSAFDAVLGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15832; Mature: 15832

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNFKRFCKSLLAVAFATALVLTSFSTIAPTALAGSNTGIVIAQASKYTEGLQPLYGRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECHHHHHHHHHHHHHH
SELEGYVSEGDWNNVRTFIRGPLGELGPLSRRLGDSLPAATQKSGRRTIKLLADHLNKLD
HHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAAAKRNSTTAAKEYDAVVSAFDAVLGLS
HHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILNFKRFCKSLLAVAFATALVLTSFSTIAPTALAGSNTGIVIAQASKYTEGLQPLYGRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECHHHHHHHHHHHHHH
SELEGYVSEGDWNNVRTFIRGPLGELGPLSRRLGDSLPAATQKSGRRTIKLLADHLNKLD
HHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAAAKRNSTTAAKEYDAVVSAFDAVLGLS
HHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA