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The map label for this gene is ybbK [C]

Identifier: 158336893

GI number: 158336893

Start: 3821755

End: 3823287

Strand: Direct

Name: ybbK [C]

Synonym: AM1_3764

Alternate gene names: 158336893

Gene position: 3821755-3823287 (Clockwise)

Preceding gene: 158336892

Following gene: 158336894

Centisome position: 58.76

GC content: 49.51

Gene sequence:

>1533_bases
ATGTTTAAGTCTTTTTACATTAAGCCCCATGAGCGGGGCATGTTGTTCTATCGCAGTAAGTTTGAGATGTTTTTGCTGCC
GGGTACCCATCGCCGCATGGGGTGGCATTGGCAGGTGAAGACCTTTGATTTAAATCAGCCCCAAGCCCAGATTGACCATT
TGGAGCTGCTATTGCAAACCCATGCCCACAGTATGAATGAGTATTTTACGGTGGTGCGCACGGTTCATAATCAAGCTGCC
TTAGTGCGATTGGGACAACAATGGTGCACGATTGGTCCCAACCAGCTGCAAGCGTTTTGGCGTGGCTTTATTGAGGTAGA
AGTGCATCTATTTAATCTGGATGAAGGGATTGACCTGCCGTCTCAGTTTGTCCAGCGATTGCGAGATGTATCGCTACCGG
ATTTGAATCTAGTCTCAATTCCTGAATCTCAGCTAGGGATGCTCTATGAGCAGGATAATTTTGTGCGGCCTCTCGCGTCT
GGAGAGTATGGGTTTTGGACCTGCGATCGCAAAGTCAGTATTACCCGCTATGATCGCACTCGTCCCGATCCAGATTTTAC
GTTTGTGGACGTACTGGTCGATGATCATCCCGATTTTGTCACCAGTCACTGTGAATTCGTGCAGTTAGGCAATCAGGAGG
TTGCCATTGTTCGCCATCAGGGCAAAGTGATTAGGATTTTGCCCCCCTGCAGTCGCCAGTTGTTCTGGCAAGGGGTTGCT
GTTGAGGTGATTGATATTAGCGATGATGCCAAGCTCTCACCTACATTGGTGGCTGAGTTGGTGGCTGGGGTACCCGAGGT
ATTGGATTTAGCCTATGAGGCCCTGTATATCTTGGAAGTCCCGGCCCAGCATTTAGGATTGCTGTATGAAGCCAGCGCTT
TTGTCGATACCCTTTCTCCCGGCTGGCATGTCTGGTGGACTTTTGGCCGAGCCTGGAAAACGGAAATTGTGGATTTGCGT
TTGCAAACCCTAGAAGTCTCTGGCCAGGAAATTTTATCCAAGGATAAGGTGTCCCTGCGTCTAAACCTGACAGCGGGGTA
TCGGATTACGGATCCGGTACAGGCTAAAGCTGGCTTGAGCAATATTGAGGATTATCTCTATAAAGAGCTGCAATTTGCTC
TACGTTCGGCCGTGGGGACCAAGTCTCTAGATCAACTCCTAGAAGACAAGGGGGCGATTGATGCCAGCGTCTCTGACTAT
ATCCGTGAGAAAACCGAGCAATATGGAGTTGCTATCGCATCTGTCGGTGTCAAAGACATCATTCTGCCCGGTGAGATGAA
GTCGATTCTCTGTCAGGTGGTGGAAGCGGAAAAATCCGCCCAGGCTAACGTAATTCGTCGTCGAGAGGAGACTGCTGCTA
CCCGCAGTATGCTCAACACCGCTAAGGTGATGGAGAGTAATCCCGTGGCCTTGCGCTTGAAAGAGCTGGAGGTGCTGGAA
CGGATTGCGGACAAAATTGAGCATATTCATGTCAATGGCGGTCTCGATAGTATCTTGACTGAGATGATCCGCATCAACGG
AACTAGAGAATAG

Upstream 100 bases:

>100_bases
AGTCACGGGCGATGGCCCGCACTGTAACTGTTGATGCCAGCAGCTTAGGGTGCCTTTAAAAGTGCAGATGGACCTGCACG
AGAAGAAGAAGGAAATATCA

Downstream 100 bases:

>100_bases
AGCCGATCGGGCATCGGCTCCACACTGAAAAGGCAAACGATGGAAGCTGTAATCTTGGTGGGTATTCAGGCTACGGGTAA
ATCGACGTTTTATCACCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MFKSFYIKPHERGMLFYRSKFEMFLLPGTHRRMGWHWQVKTFDLNQPQAQIDHLELLLQTHAHSMNEYFTVVRTVHNQAA
LVRLGQQWCTIGPNQLQAFWRGFIEVEVHLFNLDEGIDLPSQFVQRLRDVSLPDLNLVSIPESQLGMLYEQDNFVRPLAS
GEYGFWTCDRKVSITRYDRTRPDPDFTFVDVLVDDHPDFVTSHCEFVQLGNQEVAIVRHQGKVIRILPPCSRQLFWQGVA
VEVIDISDDAKLSPTLVAELVAGVPEVLDLAYEALYILEVPAQHLGLLYEASAFVDTLSPGWHVWWTFGRAWKTEIVDLR
LQTLEVSGQEILSKDKVSLRLNLTAGYRITDPVQAKAGLSNIEDYLYKELQFALRSAVGTKSLDQLLEDKGAIDASVSDY
IREKTEQYGVAIASVGVKDIILPGEMKSILCQVVEAEKSAQANVIRRREETAATRSMLNTAKVMESNPVALRLKELEVLE
RIADKIEHIHVNGGLDSILTEMIRINGTRE

Sequences:

>Translated_510_residues
MFKSFYIKPHERGMLFYRSKFEMFLLPGTHRRMGWHWQVKTFDLNQPQAQIDHLELLLQTHAHSMNEYFTVVRTVHNQAA
LVRLGQQWCTIGPNQLQAFWRGFIEVEVHLFNLDEGIDLPSQFVQRLRDVSLPDLNLVSIPESQLGMLYEQDNFVRPLAS
GEYGFWTCDRKVSITRYDRTRPDPDFTFVDVLVDDHPDFVTSHCEFVQLGNQEVAIVRHQGKVIRILPPCSRQLFWQGVA
VEVIDISDDAKLSPTLVAELVAGVPEVLDLAYEALYILEVPAQHLGLLYEASAFVDTLSPGWHVWWTFGRAWKTEIVDLR
LQTLEVSGQEILSKDKVSLRLNLTAGYRITDPVQAKAGLSNIEDYLYKELQFALRSAVGTKSLDQLLEDKGAIDASVSDY
IREKTEQYGVAIASVGVKDIILPGEMKSILCQVVEAEKSAQANVIRRREETAATRSMLNTAKVMESNPVALRLKELEVLE
RIADKIEHIHVNGGLDSILTEMIRINGTRE
>Mature_510_residues
MFKSFYIKPHERGMLFYRSKFEMFLLPGTHRRMGWHWQVKTFDLNQPQAQIDHLELLLQTHAHSMNEYFTVVRTVHNQAA
LVRLGQQWCTIGPNQLQAFWRGFIEVEVHLFNLDEGIDLPSQFVQRLRDVSLPDLNLVSIPESQLGMLYEQDNFVRPLAS
GEYGFWTCDRKVSITRYDRTRPDPDFTFVDVLVDDHPDFVTSHCEFVQLGNQEVAIVRHQGKVIRILPPCSRQLFWQGVA
VEVIDISDDAKLSPTLVAELVAGVPEVLDLAYEALYILEVPAQHLGLLYEASAFVDTLSPGWHVWWTFGRAWKTEIVDLR
LQTLEVSGQEILSKDKVSLRLNLTAGYRITDPVQAKAGLSNIEDYLYKELQFALRSAVGTKSLDQLLEDKGAIDASVSDY
IREKTEQYGVAIASVGVKDIILPGEMKSILCQVVEAEKSAQANVIRRREETAATRSMLNTAKVMESNPVALRLKELEVLE
RIADKIEHIHVNGGLDSILTEMIRINGTRE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI21686995, Length=167, Percent_Identity=30.5389221556886, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI221316744, Length=167, Percent_Identity=30.5389221556886, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI38016911, Length=167, Percent_Identity=30.5389221556886, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17570161, Length=170, Percent_Identity=35.8823529411765, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193210507, Length=170, Percent_Identity=35.8823529411765, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17569497, Length=189, Percent_Identity=29.6296296296296, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32566490, Length=182, Percent_Identity=31.3186813186813, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71987621, Length=170, Percent_Identity=35.2941176470588, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25153583, Length=170, Percent_Identity=35.2941176470588, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71987612, Length=170, Percent_Identity=35.2941176470588, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193209764, Length=169, Percent_Identity=28.4023668639053, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17569493, Length=169, Percent_Identity=28.4023668639053, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17569499, Length=172, Percent_Identity=30.2325581395349, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17570459, Length=172, Percent_Identity=30.8139534883721, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71989948, Length=172, Percent_Identity=30.2325581395349, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71989955, Length=115, Percent_Identity=33.0434782608696, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21356845, Length=202, Percent_Identity=27.2277227722772, Blast_Score=89, Evalue=9e-18,
Organism=Drosophila melanogaster, GI28573263, Length=169, Percent_Identity=29.585798816568, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI45556022, Length=169, Percent_Identity=30.1775147928994, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI18860517, Length=170, Percent_Identity=32.9411764705882, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24657857, Length=167, Percent_Identity=29.3413173652695, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281365664, Length=167, Percent_Identity=29.3413173652695, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI62484448, Length=167, Percent_Identity=29.3413173652695, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281361631, Length=171, Percent_Identity=28.6549707602339, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281361633, Length=171, Percent_Identity=28.6549707602339, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI62484274, Length=167, Percent_Identity=29.3413173652695, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281361635, Length=165, Percent_Identity=27.8787878787879, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45550506, Length=171, Percent_Identity=24.5614035087719, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 58088; Mature: 58088

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSFYIKPHERGMLFYRSKFEMFLLPGTHRRMGWHWQVKTFDLNQPQAQIDHLELLLQT
CCCCEECCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHH
HAHSMNEYFTVVRTVHNQAALVRLGQQWCTIGPNQLQAFWRGFIEVEVHLFNLDEGIDLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEEEEECCCCCCCH
SQFVQRLRDVSLPDLNLVSIPESQLGMLYEQDNFVRPLASGEYGFWTCDRKVSITRYDRT
HHHHHHHHCCCCCCCEEEECCHHHHCCEECCCCCCCCCCCCCCCEEEECCEEEEEECCCC
RPDPDFTFVDVLVDDHPDFVTSHCEFVQLGNQEVAIVRHQGKVIRILPPCSRQLFWQGVA
CCCCCEEEEEEEECCCCCHHHCCCHHEECCCCEEEEEEECCCEEEECCCCCHHHHHCCEE
VEVIDISDDAKLSPTLVAELVAGVPEVLDLAYEALYILEVPAQHLGLLYEASAFVDTLSP
EEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCC
GWHVWWTFGRAWKTEIVDLRLQTLEVSGQEILSKDKVSLRLNLTAGYRITDPVQAKAGLS
CCEEEEECCCHHHHHHHHEEEEEEECCCHHHHCCCCEEEEEEEEECCEECCCHHHHCCHH
NIEDYLYKELQFALRSAVGTKSLDQLLEDKGAIDASVSDYIREKTEQYGVAIASVGVKDI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEECCHHHE
ILPGEMKSILCQVVEAEKSAQANVIRRREETAATRSMLNTAKVMESNPVALRLKELEVLE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
RIADKIEHIHVNGGLDSILTEMIRINGTRE
HHHHHHHEEEECCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFKSFYIKPHERGMLFYRSKFEMFLLPGTHRRMGWHWQVKTFDLNQPQAQIDHLELLLQT
CCCCEECCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHH
HAHSMNEYFTVVRTVHNQAALVRLGQQWCTIGPNQLQAFWRGFIEVEVHLFNLDEGIDLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEEEEECCCCCCCH
SQFVQRLRDVSLPDLNLVSIPESQLGMLYEQDNFVRPLASGEYGFWTCDRKVSITRYDRT
HHHHHHHHCCCCCCCEEEECCHHHHCCEECCCCCCCCCCCCCCCEEEECCEEEEEECCCC
RPDPDFTFVDVLVDDHPDFVTSHCEFVQLGNQEVAIVRHQGKVIRILPPCSRQLFWQGVA
CCCCCEEEEEEEECCCCCHHHCCCHHEECCCCEEEEEEECCCEEEECCCCCHHHHHCCEE
VEVIDISDDAKLSPTLVAELVAGVPEVLDLAYEALYILEVPAQHLGLLYEASAFVDTLSP
EEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCC
GWHVWWTFGRAWKTEIVDLRLQTLEVSGQEILSKDKVSLRLNLTAGYRITDPVQAKAGLS
CCEEEEECCCHHHHHHHHEEEEEEECCCHHHHCCCCEEEEEEEEECCEECCCHHHHCCHH
NIEDYLYKELQFALRSAVGTKSLDQLLEDKGAIDASVSDYIREKTEQYGVAIASVGVKDI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEECCHHHE
ILPGEMKSILCQVVEAEKSAQANVIRRREETAATRSMLNTAKVMESNPVALRLKELEVLE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
RIADKIEHIHVNGGLDSILTEMIRINGTRE
HHHHHHHEEEECCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]