Click here to switch to the map view.

The map label for this gene is 158336838

Identifier: 158336838

GI number: 158336838

Start: 3763178

End: 3765502

Strand: Reverse

Name: 158336838

Synonym: AM1_3705

Alternate gene names: NA

Gene position: 3765502-3763178 (Counterclockwise)

Preceding gene: 158336839

Following gene: 158336835

Centisome position: 57.9

GC content: 52.95

Gene sequence:

>2325_bases
ATGGATGCAGATCAGGCCCTGAGACAAGTGGAACAGCTTGTGATTGCTCAAACGGGTGAGCGTCTCAGCGAATTACAGCA
AACGATTCTGAGGCAGGTTTGGCTGGGATCCAAATACTTTGATATTGCCGATGCCTATGGCTGTACTGAAGGCCATGCCA
AAGATGTAGGGTCAGATTTATGGAAGCTCTTATCCCAGATATTGGGCGAGAAAATCACAAAAAAGAACCTTCGCCAGGTT
CTGACAGCCCATAGGCATGGTTCCGTCCCACCTGAACAGGCCTATCGGCCCGACTTCGTTGGGCGACATCAAGCCATCCA
CCGTCTCAGCCACCTCAACCAGCAAGGGGCAACGGCCATTGCCATCCAAGGGGAAGGGGGGCTAGGAAAAACGACGTTGG
CCCAGCAATATTTGCAGAGCCAAAACTTTGAAATCGTCTTAGAGCTACTGATGGCCAAAGAGCCCGACAATATCACCTCG
GTCCAGCGGGTGGTGGAGGAATGGTTAACACGGGATTTACATGAAGAGCCAGGACTAGAATTCGGCATTAGTCTAGATCG
CTTAAAACGCCATCTCCAACAGCGCCCCATTGGAGTCCTAGTGGATAATCTGGAGCCTGCACTAGATCAGCAAGGACTCT
TGATTGGAAAGCATCGTCAGTATGTGGAGCTATTTCGAGTCCTCACGGACCCTCGTAATCTGGGATTAACCTTGGTAACG
AGTCGTGATCGCATTTGTGAAGCCAGCCTCAACCTACACCATTACCGACTCTCGGGTTTAGATGTGGAGGCTTGGCAGCA
GTATTTTCAGCTGCAGGAGCTGACCATCGACCTAACGCTACTAGAGCAAATGCATCGGGCCTATGGAGGCAACGCCAAGG
CTATGACCCTGCTCTGCGGGTCGATCCGGTCCGACTTTGGTGGCGATGCAGCAGCTTTTTGGCAAGATCAACAGCAGGAC
TTGCTGGTTGCGGCGGATCTAGCCCATCTGATTAATAATCAAATTGACCGTCTCCAAAACCTGGACCCCCAAGCCTATCA
GTTATTTTGTCGGTTGGGCTGTTATCGATACCAGACCCTAGCCACCCTTTCCAAAGCAGGCGTTTTGGCCTTGCTCTGGG
AAGTACCAGAAGCAAAACGACGAGCCAGTCTGATGTCTCTGCAAAACCGATCATTGATAGAGTGCCGCCAAGGTCGATAT
TGGCTGCATCCCGTCACTCGTGCTGCTTCTATTGCCCGTCTGCAGCCCAGTTCTGATTGGCAACAGGCCCACCGCCATGC
CGCCCAATACTGGTCCGATAGTGTTCAAACCCTGACGACCACTGAAGATGCCTTGCAGGCCCTAGAAGCCTTTTATCACT
ACAAAGCCATTCAAGACTATTCTCAAGCAGCAGCCGTGCTGCTCCAGGTGCGCCAAAACCAGTGGCAGCAATACTTATCC
CTGGGCAGCAGTCTCTATCGGATGGGGTTGCACCAGTCTCTGCTAGGAGAGTTACCGTCATTAATGACGCATCTGCCTTG
CGATCGCAGCTATTGCGAACTCCAAAATATCCTGGCGGACTACTATTGGAGCACGGGACAGATTCGCCAAGGGATAACCC
TACAACGGGACTCCCTCAGTCTATCCACTCAAGCCCTAGCAGCCCCAGACTTAGACCCCCGTCACCACCGTCATTTTCAA
ATTCAAGTCCTCGATTCCCACCTCAGTTTAGGGTTGTACCACTTAGATTTATGGGAATTAGAACATTCTGCCCATTGCTT
TCAGCAGGTAATCGAGATTGCCACCCAAACCGACCAGGACCGTTGGGTACCAAAAGCTTCCATTTGCTTAGCCCTGGTGT
TAACTCACCTCGGCCAGACCGAGCAGGCACAACAGCTCGCCACCCAAGCCTGGGGAGAGCGTCTGCCGGAAACAGAGCAA
GCCGCCCGCCTGGCTTTCTTTATGCAGCTCCTGGGCCAAACCTACACCGCTCTTGGAGACCTGTCCTCAGCCCATGCCCT
GTTTGAGCAGGCCCTAACCGTGGCGGAAGCCAGCCACTATCCCCATATCCAGGCCCGCACCCTAACGGGACGTGCCGTCA
TTCACCGACTGCAAGACAAATTCAACCTCGCAGTGGCCGATCACAATCAGGCGATTGCCCTGTTCAACCCCCTCAATGCG
ACCTGTGACTTAGCAGAAGCGTATTTTCAGTGGGGGTTGACCTATCAGGCCATGCATCAGATCTGCGATCGCAACCAAGC
CTTCCACCAAGCTACCCAACTCTTCACAGTCATGGATGCACCCTGTCAGGTTCAGCGGGTGTTAGCCTGTACCACTCTCC
CTTAA

Upstream 100 bases:

>100_bases
CCCACCGGTTTTTAGCCATAGTACCGGTGGGGTTTTTCCTATCTATCCCCAGTTAGGGCTGGGCTAGACTGGAGATTAAG
GAAAGATCGTTCCCTCAACC

Downstream 100 bases:

>100_bases
CTCCGCTGACGCACCCGCCGTTGGTGCCGCCGACGTTGACGCCGCTGGGCAGCTAAGGAGGCCCACAGTAACAAGAGCGC
ACAGCATACGCCTGTAAACA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 774

Protein sequence:

>774_residues
MDADQALRQVEQLVIAQTGERLSELQQTILRQVWLGSKYFDIADAYGCTEGHAKDVGSDLWKLLSQILGEKITKKNLRQV
LTAHRHGSVPPEQAYRPDFVGRHQAIHRLSHLNQQGATAIAIQGEGGLGKTTLAQQYLQSQNFEIVLELLMAKEPDNITS
VQRVVEEWLTRDLHEEPGLEFGISLDRLKRHLQQRPIGVLVDNLEPALDQQGLLIGKHRQYVELFRVLTDPRNLGLTLVT
SRDRICEASLNLHHYRLSGLDVEAWQQYFQLQELTIDLTLLEQMHRAYGGNAKAMTLLCGSIRSDFGGDAAAFWQDQQQD
LLVAADLAHLINNQIDRLQNLDPQAYQLFCRLGCYRYQTLATLSKAGVLALLWEVPEAKRRASLMSLQNRSLIECRQGRY
WLHPVTRAASIARLQPSSDWQQAHRHAAQYWSDSVQTLTTTEDALQALEAFYHYKAIQDYSQAAAVLLQVRQNQWQQYLS
LGSSLYRMGLHQSLLGELPSLMTHLPCDRSYCELQNILADYYWSTGQIRQGITLQRDSLSLSTQALAAPDLDPRHHRHFQ
IQVLDSHLSLGLYHLDLWELEHSAHCFQQVIEIATQTDQDRWVPKASICLALVLTHLGQTEQAQQLATQAWGERLPETEQ
AARLAFFMQLLGQTYTALGDLSSAHALFEQALTVAEASHYPHIQARTLTGRAVIHRLQDKFNLAVADHNQAIALFNPLNA
TCDLAEAYFQWGLTYQAMHQICDRNQAFHQATQLFTVMDAPCQVQRVLACTTLP

Sequences:

>Translated_774_residues
MDADQALRQVEQLVIAQTGERLSELQQTILRQVWLGSKYFDIADAYGCTEGHAKDVGSDLWKLLSQILGEKITKKNLRQV
LTAHRHGSVPPEQAYRPDFVGRHQAIHRLSHLNQQGATAIAIQGEGGLGKTTLAQQYLQSQNFEIVLELLMAKEPDNITS
VQRVVEEWLTRDLHEEPGLEFGISLDRLKRHLQQRPIGVLVDNLEPALDQQGLLIGKHRQYVELFRVLTDPRNLGLTLVT
SRDRICEASLNLHHYRLSGLDVEAWQQYFQLQELTIDLTLLEQMHRAYGGNAKAMTLLCGSIRSDFGGDAAAFWQDQQQD
LLVAADLAHLINNQIDRLQNLDPQAYQLFCRLGCYRYQTLATLSKAGVLALLWEVPEAKRRASLMSLQNRSLIECRQGRY
WLHPVTRAASIARLQPSSDWQQAHRHAAQYWSDSVQTLTTTEDALQALEAFYHYKAIQDYSQAAAVLLQVRQNQWQQYLS
LGSSLYRMGLHQSLLGELPSLMTHLPCDRSYCELQNILADYYWSTGQIRQGITLQRDSLSLSTQALAAPDLDPRHHRHFQ
IQVLDSHLSLGLYHLDLWELEHSAHCFQQVIEIATQTDQDRWVPKASICLALVLTHLGQTEQAQQLATQAWGERLPETEQ
AARLAFFMQLLGQTYTALGDLSSAHALFEQALTVAEASHYPHIQARTLTGRAVIHRLQDKFNLAVADHNQAIALFNPLNA
TCDLAEAYFQWGLTYQAMHQICDRNQAFHQATQLFTVMDAPCQVQRVLACTTLP
>Mature_774_residues
MDADQALRQVEQLVIAQTGERLSELQQTILRQVWLGSKYFDIADAYGCTEGHAKDVGSDLWKLLSQILGEKITKKNLRQV
LTAHRHGSVPPEQAYRPDFVGRHQAIHRLSHLNQQGATAIAIQGEGGLGKTTLAQQYLQSQNFEIVLELLMAKEPDNITS
VQRVVEEWLTRDLHEEPGLEFGISLDRLKRHLQQRPIGVLVDNLEPALDQQGLLIGKHRQYVELFRVLTDPRNLGLTLVT
SRDRICEASLNLHHYRLSGLDVEAWQQYFQLQELTIDLTLLEQMHRAYGGNAKAMTLLCGSIRSDFGGDAAAFWQDQQQD
LLVAADLAHLINNQIDRLQNLDPQAYQLFCRLGCYRYQTLATLSKAGVLALLWEVPEAKRRASLMSLQNRSLIECRQGRY
WLHPVTRAASIARLQPSSDWQQAHRHAAQYWSDSVQTLTTTEDALQALEAFYHYKAIQDYSQAAAVLLQVRQNQWQQYLS
LGSSLYRMGLHQSLLGELPSLMTHLPCDRSYCELQNILADYYWSTGQIRQGITLQRDSLSLSTQALAAPDLDPRHHRHFQ
IQVLDSHLSLGLYHLDLWELEHSAHCFQQVIEIATQTDQDRWVPKASICLALVLTHLGQTEQAQQLATQAWGERLPETEQ
AARLAFFMQLLGQTYTALGDLSSAHALFEQALTVAEASHYPHIQARTLTGRAVIHRLQDKFNLAVADHNQAIALFNPLNA
TCDLAEAYFQWGLTYQAMHQICDRNQAFHQATQLFTVMDAPCQVQRVLACTTLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 87779; Mature: 87779

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS50005 TPR L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDADQALRQVEQLVIAQTGERLSELQQTILRQVWLGSKYFDIADAYGCTEGHAKDVGSDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHH
WKLLSQILGEKITKKNLRQVLTAHRHGSVPPEQAYRPDFVGRHQAIHRLSHLNQQGATAI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEEE
AIQGEGGLGKTTLAQQYLQSQNFEIVLELLMAKEPDNITSVQRVVEEWLTRDLHEEPGLE
EEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCE
FGISLDRLKRHLQQRPIGVLVDNLEPALDQQGLLIGKHRQYVELFRVLTDPRNLGLTLVT
ECCCHHHHHHHHHHCCHHEEECCCCHHHCCCCCEECCHHHHHHHHHHHHCCCCCCEEEEE
SRDRICEASLNLHHYRLSGLDVEAWQQYFQLQELTIDLTLLEQMHRAYGGNAKAMTLLCG
CCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SIRSDFGGDAAAFWQDQQQDLLVAADLAHLINNQIDRLQNLDPQAYQLFCRLGCYRYQTL
HHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ATLSKAGVLALLWEVPEAKRRASLMSLQNRSLIECRQGRYWLHPVTRAASIARLQPSSDW
HHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCCEEECHHHHHHHHHHCCCCCHH
QQAHRHAAQYWSDSVQTLTTTEDALQALEAFYHYKAIQDYSQAAAVLLQVRQNQWQQYLS
HHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSSLYRMGLHQSLLGELPSLMTHLPCDRSYCELQNILADYYWSTGQIRQGITLQRDSLS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHCCCEEECCCCC
LSTQALAAPDLDPRHHRHFQIQVLDSHLSLGLYHLDLWELEHSAHCFQQVIEIATQTDQD
HHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RWVPKASICLALVLTHLGQTEQAQQLATQAWGERLPETEQAARLAFFMQLLGQTYTALGD
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
LSSAHALFEQALTVAEASHYPHIQARTLTGRAVIHRLQDKFNLAVADHNQAIALFNPLNA
CHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCC
TCDLAEAYFQWGLTYQAMHQICDRNQAFHQATQLFTVMDAPCQVQRVLACTTLP
HHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDADQALRQVEQLVIAQTGERLSELQQTILRQVWLGSKYFDIADAYGCTEGHAKDVGSDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHH
WKLLSQILGEKITKKNLRQVLTAHRHGSVPPEQAYRPDFVGRHQAIHRLSHLNQQGATAI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEEE
AIQGEGGLGKTTLAQQYLQSQNFEIVLELLMAKEPDNITSVQRVVEEWLTRDLHEEPGLE
EEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCE
FGISLDRLKRHLQQRPIGVLVDNLEPALDQQGLLIGKHRQYVELFRVLTDPRNLGLTLVT
ECCCHHHHHHHHHHCCHHEEECCCCHHHCCCCCEECCHHHHHHHHHHHHCCCCCCEEEEE
SRDRICEASLNLHHYRLSGLDVEAWQQYFQLQELTIDLTLLEQMHRAYGGNAKAMTLLCG
CCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SIRSDFGGDAAAFWQDQQQDLLVAADLAHLINNQIDRLQNLDPQAYQLFCRLGCYRYQTL
HHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ATLSKAGVLALLWEVPEAKRRASLMSLQNRSLIECRQGRYWLHPVTRAASIARLQPSSDW
HHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCCEEECHHHHHHHHHHCCCCCHH
QQAHRHAAQYWSDSVQTLTTTEDALQALEAFYHYKAIQDYSQAAAVLLQVRQNQWQQYLS
HHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSSLYRMGLHQSLLGELPSLMTHLPCDRSYCELQNILADYYWSTGQIRQGITLQRDSLS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHCCCEEECCCCC
LSTQALAAPDLDPRHHRHFQIQVLDSHLSLGLYHLDLWELEHSAHCFQQVIEIATQTDQD
HHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RWVPKASICLALVLTHLGQTEQAQQLATQAWGERLPETEQAARLAFFMQLLGQTYTALGD
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
LSSAHALFEQALTVAEASHYPHIQARTLTGRAVIHRLQDKFNLAVADHNQAIALFNPLNA
CHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCC
TCDLAEAYFQWGLTYQAMHQICDRNQAFHQATQLFTVMDAPCQVQRVLACTTLP
HHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]