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The map label for this gene is icc [H]

Identifier: 158336836

GI number: 158336836

Start: 3761939

End: 3762736

Strand: Direct

Name: icc [H]

Synonym: AM1_3704

Alternate gene names: 158336836

Gene position: 3761939-3762736 (Clockwise)

Preceding gene: 158336832

Following gene: 158336837

Centisome position: 57.84

GC content: 45.61

Gene sequence:

>798_bases
ATGAAAAAAAGCTCACCTCTATTGATTGCTCAATTGTCGGACTTGCATTTATTTGCAAACCCTGACCGTGATCTCTTGGG
GCTGAATACTTTTTCTTCTCTAGAAGCAGTCGTACAGAAATTAAAACAGCTTCCTGTCCTTCCTGATCAGCTGTTACTGA
CGGGAGATTTAGCACAGGATGAAACTCCTATTGCTTACCAACAGATTCAATCCTTAATTGCCCCCTTGCAGATCCCCACC
TACTGGCTGCCGGGGAATCACGACCATCTACCCACCATGCAGGCCACCTTTACAGCGCCTAGCTTTCAGGCTCATAAGTC
TTATCAGATGGGAGATTGGCACTTTTTACTTTTAGACTCCAGCGTGACTGGAAAAGTCTATGGTGGCTTGTCACCGGAGA
GTTTAGATTGGCTCAATCAAGAACTAGAGCAGTGCGATCCCCAGCCCACACTGATTGCGCTTCACCATCCTCCGTTTGCG
ATTAAATCGGATTGGCTGGATCAAATTGGCCTCCAAAACTCGGACGATTTATTTGCCATTCTCGATAGACATTCCCACGT
TAAACTTGTGGTGTTTGGTCATATCCATCAGCAATTTGAACATCAGCGTCGGAGTATCCATTATCTCAGCACGCCATCGA
CCTGCATTCAGTTTGCCCCTCACAGTAAAACCTTTGCCCTAGATCATGCGCAGCCAGGATTTAGGCTCTTTCAGCTCTAT
GGTGATGGCTCTTTTGAGACTGAAATTCATCGCGTCATGTTTGAGAAAACCTTAGATTTTTCTGCCAAGGGATATTAA

Upstream 100 bases:

>100_bases
CAGGATTTTTTCCGTCTAGCTGATTTGTCACTATCCAATCAGGTATCCTTTAGGTATAGCTATCAAGGATATTTTTTGGC
TTCTAACTACTAGTAACGGA

Downstream 100 bases:

>100_bases
GGTTTTGTTGTTAATTTCATTTCGACGCTCGTCCTTCAGTATGCTGCTTATTAGAAGGATACTGAGTCTATAACCGCTCA
AATAAACTTATATGCTAGCG

Product: 3',5'-cyclic-nucleotide phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKKSSPLLIAQLSDLHLFANPDRDLLGLNTFSSLEAVVQKLKQLPVLPDQLLLTGDLAQDETPIAYQQIQSLIAPLQIPT
YWLPGNHDHLPTMQATFTAPSFQAHKSYQMGDWHFLLLDSSVTGKVYGGLSPESLDWLNQELEQCDPQPTLIALHHPPFA
IKSDWLDQIGLQNSDDLFAILDRHSHVKLVVFGHIHQQFEHQRRSIHYLSTPSTCIQFAPHSKTFALDHAQPGFRLFQLY
GDGSFETEIHRVMFEKTLDFSAKGY

Sequences:

>Translated_265_residues
MKKSSPLLIAQLSDLHLFANPDRDLLGLNTFSSLEAVVQKLKQLPVLPDQLLLTGDLAQDETPIAYQQIQSLIAPLQIPT
YWLPGNHDHLPTMQATFTAPSFQAHKSYQMGDWHFLLLDSSVTGKVYGGLSPESLDWLNQELEQCDPQPTLIALHHPPFA
IKSDWLDQIGLQNSDDLFAILDRHSHVKLVVFGHIHQQFEHQRRSIHYLSTPSTCIQFAPHSKTFALDHAQPGFRLFQLY
GDGSFETEIHRVMFEKTLDFSAKGY
>Mature_265_residues
MKKSSPLLIAQLSDLHLFANPDRDLLGLNTFSSLEAVVQKLKQLPVLPDQLLLTGDLAQDETPIAYQQIQSLIAPLQIPT
YWLPGNHDHLPTMQATFTAPSFQAHKSYQMGDWHFLLLDSSVTGKVYGGLSPESLDWLNQELEQCDPQPTLIALHHPPFA
IKSDWLDQIGLQNSDDLFAILDRHSHVKLVVFGHIHQQFEHQRRSIHYLSTPSTCIQFAPHSKTFALDHAQPGFRLFQLY
GDGSFETEIHRVMFEKTLDFSAKGY

Specific function: Affects The Expression Of The Lacz Gene. [C]

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli icc [H]

Homologues:

Organism=Escherichia coli, GI1789410, Length=267, Percent_Identity=38.5767790262172, Blast_Score=177, Evalue=5e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013622
- InterPro:   IPR004843
- ProDom:   PD587589 [H]

Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]

EC number: NA

Molecular weight: Translated: 30046; Mature: 30046

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00187 TPP_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSSPLLIAQLSDLHLFANPDRDLLGLNTFSSLEAVVQKLKQLPVLPDQLLLTGDLAQD
CCCCCCEEEEEECCEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
ETPIAYQQIQSLIAPLQIPTYWLPGNHDHLPTMQATFTAPSFQAHKSYQMGDWHFLLLDS
CCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEECCCCCHHCCCCCCCCEEEEEEEC
SVTGKVYGGLSPESLDWLNQELEQCDPQPTLIALHHPPFAIKSDWLDQIGLQNSDDLFAI
CCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEE
LDRHSHVKLVVFGHIHQQFEHQRRSIHYLSTPSTCIQFAPHSKTFALDHAQPGFRLFQLY
EECCCCEEEEEEHHHHHHHHHHHHCEEEECCCHHHEEECCCCCEEEECCCCCCEEEEEEE
GDGSFETEIHRVMFEKTLDFSAKGY
CCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKSSPLLIAQLSDLHLFANPDRDLLGLNTFSSLEAVVQKLKQLPVLPDQLLLTGDLAQD
CCCCCCEEEEEECCEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
ETPIAYQQIQSLIAPLQIPTYWLPGNHDHLPTMQATFTAPSFQAHKSYQMGDWHFLLLDS
CCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEECCCCCHHCCCCCCCCEEEEEEEC
SVTGKVYGGLSPESLDWLNQELEQCDPQPTLIALHHPPFAIKSDWLDQIGLQNSDDLFAI
CCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEE
LDRHSHVKLVVFGHIHQQFEHQRRSIHYLSTPSTCIQFAPHSKTFALDHAQPGFRLFQLY
EECCCCEEEEEEHHHHHHHHHHHHCEEEECCCHHHEEECCCCCEEEECCCCCCEEEEEEE
GDGSFETEIHRVMFEKTLDFSAKGY
CCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]