| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336780
Identifier: 158336780
GI number: 158336780
Start: 3703502
End: 3704758
Strand: Reverse
Name: 158336780
Synonym: AM1_3648
Alternate gene names: NA
Gene position: 3704758-3703502 (Counterclockwise)
Preceding gene: 158336784
Following gene: 158336778
Centisome position: 56.96
GC content: 48.85
Gene sequence:
>1257_bases ATGGACTATAAGCAAGACTTAATCACGACCATTCACGATTTTGATTGTGATTTGGCGTTCTTAGAAAACCGACTTACAGA ACTGACCCAGTCAAGCCCCGCCGCTGTATTAATTCCGGCTCTCTACTCGGAATTGGAACGACCGGCTTTAGGGCAAATTT GCGATCATCTTAAGGACTGTGCCTTTGTCCAAACGGTTGTCATTTGTCTCTACGCTGATAGTCTGCAGCAATATGCCCAG GCGGTTCGATTTTTTAGCGTCCTCCCGCAAAAGACCTATGTCATTTGGGAAAATGGCCCGACAATCAGCCAAACTTTAGA AAACCTGAAAGAAAAAGGCTTAGATTTACTGAAATATAAGGGTAAAGGTCGTGCAGTATGGTTGGGCTTAGGGGTTGCCT CTTTGGAAGCCCATGCGATCGCACTTCACGATGCCGACATTACCACCTACGATCGGTCCTACCCACTAAAGCTGCTCTAT CCGCTGTTAGAGAAGGAGTTTGGGATTGCCTTTAACAAAGCCTACTACGCCCGCTTAGGTCACTATCCCCGCAGCCTATA TGGCCGCGTCACCCGTCTCTTTGTCGCCCCGCTGCTCACATCCCTGACAGCGTTACTAGGTGATCGAGATTATCTACGAT ACCTGCATGCGTTTCGCTATCCCTTATCGGGAGAGTTTGCGTTAACCCATGATCTGGCCTTACAAACTCGCATCCCTGGC AACTGGGGCCTAGAAATTGGCCTTTTGTCTGAGGTTTACCGAAATCTAGCGCACCGCCGCATTTCCCAAGTTGATTTAGG CGTGTTTGAGCATAAGCATCAACAACTTGGCGCTTCTGATCAGTCAGGCCTACAAAAAATGTGCCGCGACATTTTGGGAT CCGTTCTGCGCACCCTGACCGAAACAGAGCAGGTGGTACTGACCAAAGATCATATTCACGCTCTACAAGTCAAATTCCGC CGCTCGGCCCAAGACTATGCCCATCAATATTTTATTGATGCCAGTTTCAACAGCTTGCACTTTGATCGCCACAAAGAAGA AGTCACCATTGAAACCTTCGAAAAAATTATCTTGGACGGTGGCGAAGCTTACGTCACGGATCCCAGAAACTCACAGATTC CGGCCTGGACTAGGGCTTTAGCAGTGATGCCAGACTTGCGAGAACAACTCCGTGAAGCTGCCATACTCGATGCCGCTGAG GTCAAAGCCCTCTCTCTACCTATCACTGCTCCCCATGCCGTTCAATCCAATGGGTAA
Upstream 100 bases:
>100_bases AGATATTAAAAATTTTGTAGCAAAGGTAACATTGACATACCACCGAAAATTTAACAATGTATTTATTTAAGTACTACCGC TCAAGTATTTAGGCCATTGC
Downstream 100 bases:
>100_bases ATCTTAGAAGCTGCTAGAAGTGAATTGCTGTAAGCTTCTTTAGGAGTGTCAGCCTATCGATGTTAGTCTCAATTAGGATG GTGGCAGTTCCATTTCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase-Like Protein; Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase; Glycosyltransferase Family Protein; Glucosyl-3-Phosphoglycerate Synthase; Glycosyltransferase Group; Cell Wall Biosynthesis Glycosyltransferase
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MDYKQDLITTIHDFDCDLAFLENRLTELTQSSPAAVLIPALYSELERPALGQICDHLKDCAFVQTVVICLYADSLQQYAQ AVRFFSVLPQKTYVIWENGPTISQTLENLKEKGLDLLKYKGKGRAVWLGLGVASLEAHAIALHDADITTYDRSYPLKLLY PLLEKEFGIAFNKAYYARLGHYPRSLYGRVTRLFVAPLLTSLTALLGDRDYLRYLHAFRYPLSGEFALTHDLALQTRIPG NWGLEIGLLSEVYRNLAHRRISQVDLGVFEHKHQQLGASDQSGLQKMCRDILGSVLRTLTETEQVVLTKDHIHALQVKFR RSAQDYAHQYFIDASFNSLHFDRHKEEVTIETFEKIILDGGEAYVTDPRNSQIPAWTRALAVMPDLREQLREAAILDAAE VKALSLPITAPHAVQSNG
Sequences:
>Translated_418_residues MDYKQDLITTIHDFDCDLAFLENRLTELTQSSPAAVLIPALYSELERPALGQICDHLKDCAFVQTVVICLYADSLQQYAQ AVRFFSVLPQKTYVIWENGPTISQTLENLKEKGLDLLKYKGKGRAVWLGLGVASLEAHAIALHDADITTYDRSYPLKLLY PLLEKEFGIAFNKAYYARLGHYPRSLYGRVTRLFVAPLLTSLTALLGDRDYLRYLHAFRYPLSGEFALTHDLALQTRIPG NWGLEIGLLSEVYRNLAHRRISQVDLGVFEHKHQQLGASDQSGLQKMCRDILGSVLRTLTETEQVVLTKDHIHALQVKFR RSAQDYAHQYFIDASFNSLHFDRHKEEVTIETFEKIILDGGEAYVTDPRNSQIPAWTRALAVMPDLREQLREAAILDAAE VKALSLPITAPHAVQSNG >Mature_418_residues MDYKQDLITTIHDFDCDLAFLENRLTELTQSSPAAVLIPALYSELERPALGQICDHLKDCAFVQTVVICLYADSLQQYAQ AVRFFSVLPQKTYVIWENGPTISQTLENLKEKGLDLLKYKGKGRAVWLGLGVASLEAHAIALHDADITTYDRSYPLKLLY PLLEKEFGIAFNKAYYARLGHYPRSLYGRVTRLFVAPLLTSLTALLGDRDYLRYLHAFRYPLSGEFALTHDLALQTRIPG NWGLEIGLLSEVYRNLAHRRISQVDLGVFEHKHQQLGASDQSGLQKMCRDILGSVLRTLTETEQVVLTKDHIHALQVKFR RSAQDYAHQYFIDASFNSLHFDRHKEEVTIETFEKIILDGGEAYVTDPRNSQIPAWTRALAVMPDLREQLREAAILDAAE VKALSLPITAPHAVQSNG
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47301; Mature: 47301
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKQDLITTIHDFDCDLAFLENRLTELTQSSPAAVLIPALYSELERPALGQICDHLKDC CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHH AFVQTVVICLYADSLQQYAQAVRFFSVLPQKTYVIWENGPTISQTLENLKEKGLDLLKYK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEC GKGRAVWLGLGVASLEAHAIALHDADITTYDRSYPLKLLYPLLEKEFGIAFNKAYYARLG CCCCEEEEECCHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHC HYPRSLYGRVTRLFVAPLLTSLTALLGDRDYLRYLHAFRYPLSGEFALTHDLALQTRIPG CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC NWGLEIGLLSEVYRNLAHRRISQVDLGVFEHKHQQLGASDQSGLQKMCRDILGSVLRTLT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ETEQVVLTKDHIHALQVKFRRSAQDYAHQYFIDASFNSLHFDRHKEEVTIETFEKIILDG CCHHEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC GEAYVTDPRNSQIPAWTRALAVMPDLREQLREAAILDAAEVKALSLPITAPHAVQSNG CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC >Mature Secondary Structure MDYKQDLITTIHDFDCDLAFLENRLTELTQSSPAAVLIPALYSELERPALGQICDHLKDC CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHH AFVQTVVICLYADSLQQYAQAVRFFSVLPQKTYVIWENGPTISQTLENLKEKGLDLLKYK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEC GKGRAVWLGLGVASLEAHAIALHDADITTYDRSYPLKLLYPLLEKEFGIAFNKAYYARLG CCCCEEEEECCHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHC HYPRSLYGRVTRLFVAPLLTSLTALLGDRDYLRYLHAFRYPLSGEFALTHDLALQTRIPG CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC NWGLEIGLLSEVYRNLAHRRISQVDLGVFEHKHQQLGASDQSGLQKMCRDILGSVLRTLT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ETEQVVLTKDHIHALQVKFRRSAQDYAHQYFIDASFNSLHFDRHKEEVTIETFEKIILDG CCHHEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC GEAYVTDPRNSQIPAWTRALAVMPDLREQLREAAILDAAEVKALSLPITAPHAVQSNG CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA