| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is wbjE [H]
Identifier: 158336739
GI number: 158336739
Start: 3662118
End: 3663377
Strand: Reverse
Name: wbjE [H]
Synonym: AM1_3607
Alternate gene names: 158336739
Gene position: 3663377-3662118 (Counterclockwise)
Preceding gene: 158336740
Following gene: 158336738
Centisome position: 56.33
GC content: 43.49
Gene sequence:
>1260_bases ATGAATCGCGTTGTCGTTTTAACAGAATTGTTTTATCCAGAAAGAACATCAACAGCTTATTTTCTAACTGCAATTGCTCA AGGACTGGTCACAGACTATCCAGTGATAGTCTTTACTGACGCTTCTCTATATGAAAGTCAAGCGTCAAGCTTGGCCTCAT ATGTTGTTGTAAAAGGGGTGGAAATTCATCGATGTTCTGGAACAGCATTCGATAAGAATTGGCTTCCTGGACGCCTAGTG AATGGTTGTACCCGTGCGATCGCAATCTTTTTACAAGCCTTATGGCAGTGCCATGCCAGTGATGTGGTCTTAGTCGTCAC CAATCCACCACTCTTGCCCTTTATGGCATGGTTACTCAAAACGTTGAAGGGGTGTGAGTTTGTTCTCTTGGTGCATGATG TTTATCCCGAAGTGTTATCTGCTACGGGGCTTGTCCATAACCACTCTCTGGTCTATCGACTAGTGCAAAGGGGCAATCGT CTGGTTTATGCACAGGCTAGCCGCATCATTACGCTGGGGCGAGATATGCAAAAGCTAGTGGGTCAAAAATTTACTCAGCC TGTAGAGGGGAAGCTGGTTTGTATTCCCAATTGGGCTGAAACTGAGATGATTTATCCTGTTGATAAGCAGGACAGTACCC TTTTACAGCGCTTAAAGTTAGTCGATAAGTTTGTAGTGCTCTATGCAGGGAATATGGGCCGGACTCATGACTTAAACATC TTATTGGATGCAGCAAACATCCTAACGAAAACACATCCTCAGATTCATTTTTTGCTGATTGGGGCCGGGGCTCGGAAGCC AGAGGTGGAAGCGAGGGTACAAGAGCAAAAATTGCAGAATGTCACGGTGTTACCGTACTTGCCTCATGAGGAAAAAAATG TGGCCCTTAATTCTTGTGATGTGGGAGTCATCTCATTTGTACCAGGGATGGCAGGAGTGTCAGTACCCAGCCGGATGTAC AATCAGATGGCTGCGGGCAAACCATTGATTGCGATCGCAGATCATGAATCTGAATTAGCAAAAGTCATTCAAGAAGAAGG TATTGGTTGGTTAGTTTCACCTCATGATGGTGATCAATTGGTTAAACTCTTAACTCAAATCGTGAATGATTCAGAATTAT GTAACGACATGGGACACAAAGCAGCGCAAGCTGTTTTATGTAAATATCAGCTCAAACATGCTGTAAGTAAGTATCAATCA CTTTTTCGAGAGTTAATTCCAAAAACAACCTCTCTAGCCCAAGAAACACTAAAGAAATGA
Upstream 100 bases:
>100_bases CGATAACGCCAAGATTCGTCAGCAGTCCATCTTTTCGTGGGAGTCAGCTGCAAACAAAACGCTCAGCGTTTATAAAAGCT TACTCATTTAAGGCCTGAGT
Downstream 100 bases:
>100_bases AATAGGCGCTTACTCCAACTTAACTGAAAGCTCATAGCAGCATGGCCATATCACAGTTATAAGAGAAACGCTGGAGCTGT TCTGTTTGGGCAGAACAATA
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNRVVVLTELFYPERTSTAYFLTAIAQGLVTDYPVIVFTDASLYESQASSLASYVVVKGVEIHRCSGTAFDKNWLPGRLV NGCTRAIAIFLQALWQCHASDVVLVVTNPPLLPFMAWLLKTLKGCEFVLLVHDVYPEVLSATGLVHNHSLVYRLVQRGNR LVYAQASRIITLGRDMQKLVGQKFTQPVEGKLVCIPNWAETEMIYPVDKQDSTLLQRLKLVDKFVVLYAGNMGRTHDLNI LLDAANILTKTHPQIHFLLIGAGARKPEVEARVQEQKLQNVTVLPYLPHEEKNVALNSCDVGVISFVPGMAGVSVPSRMY NQMAAGKPLIAIADHESELAKVIQEEGIGWLVSPHDGDQLVKLLTQIVNDSELCNDMGHKAAQAVLCKYQLKHAVSKYQS LFRELIPKTTSLAQETLKK
Sequences:
>Translated_419_residues MNRVVVLTELFYPERTSTAYFLTAIAQGLVTDYPVIVFTDASLYESQASSLASYVVVKGVEIHRCSGTAFDKNWLPGRLV NGCTRAIAIFLQALWQCHASDVVLVVTNPPLLPFMAWLLKTLKGCEFVLLVHDVYPEVLSATGLVHNHSLVYRLVQRGNR LVYAQASRIITLGRDMQKLVGQKFTQPVEGKLVCIPNWAETEMIYPVDKQDSTLLQRLKLVDKFVVLYAGNMGRTHDLNI LLDAANILTKTHPQIHFLLIGAGARKPEVEARVQEQKLQNVTVLPYLPHEEKNVALNSCDVGVISFVPGMAGVSVPSRMY NQMAAGKPLIAIADHESELAKVIQEEGIGWLVSPHDGDQLVKLLTQIVNDSELCNDMGHKAAQAVLCKYQLKHAVSKYQS LFRELIPKTTSLAQETLKK >Mature_419_residues MNRVVVLTELFYPERTSTAYFLTAIAQGLVTDYPVIVFTDASLYESQASSLASYVVVKGVEIHRCSGTAFDKNWLPGRLV NGCTRAIAIFLQALWQCHASDVVLVVTNPPLLPFMAWLLKTLKGCEFVLLVHDVYPEVLSATGLVHNHSLVYRLVQRGNR LVYAQASRIITLGRDMQKLVGQKFTQPVEGKLVCIPNWAETEMIYPVDKQDSTLLQRLKLVDKFVVLYAGNMGRTHDLNI LLDAANILTKTHPQIHFLLIGAGARKPEVEARVQEQKLQNVTVLPYLPHEEKNVALNSCDVGVISFVPGMAGVSVPSRMY NQMAAGKPLIAIADHESELAKVIQEEGIGWLVSPHDGDQLVKLLTQIVNDSELCNDMGHKAAQAVLCKYQLKHAVSKYQS LFRELIPKTTSLAQETLKK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1788363, Length=178, Percent_Identity=28.0898876404494, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 46554; Mature: 46554
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVVVLTELFYPERTSTAYFLTAIAQGLVTDYPVIVFTDASLYESQASSLASYVVVKGV CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCC EIHRCSGTAFDKNWLPGRLVNGCTRAIAIFLQALWQCHASDVVLVVTNPPLLPFMAWLLK EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH TLKGCEFVLLVHDVYPEVLSATGLVHNHSLVYRLVQRGNRLVYAQASRIITLGRDMQKLV HHCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCEEEHHHHHHHHH GQKFTQPVEGKLVCIPNWAETEMIYPVDKQDSTLLQRLKLVDKFVVLYAGNMGRTHDLNI HHHCCCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEE LLDAANILTKTHPQIHFLLIGAGARKPEVEARVQEQKLQNVTVLPYLPHEEKNVALNSCD EEEHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEECCCC VGVISFVPGMAGVSVPSRMYNQMAAGKPLIAIADHESELAKVIQEEGIGWLVSPHDGDQL CHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEEECCCCHHHH VKLLTQIVNDSELCNDMGHKAAQAVLCKYQLKHAVSKYQSLFRELIPKTTSLAQETLKK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MNRVVVLTELFYPERTSTAYFLTAIAQGLVTDYPVIVFTDASLYESQASSLASYVVVKGV CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCC EIHRCSGTAFDKNWLPGRLVNGCTRAIAIFLQALWQCHASDVVLVVTNPPLLPFMAWLLK EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH TLKGCEFVLLVHDVYPEVLSATGLVHNHSLVYRLVQRGNRLVYAQASRIITLGRDMQKLV HHCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCEEEHHHHHHHHH GQKFTQPVEGKLVCIPNWAETEMIYPVDKQDSTLLQRLKLVDKFVVLYAGNMGRTHDLNI HHHCCCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEE LLDAANILTKTHPQIHFLLIGAGARKPEVEARVQEQKLQNVTVLPYLPHEEKNVALNSCD EEEHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEECCCC VGVISFVPGMAGVSVPSRMYNQMAAGKPLIAIADHESELAKVIQEEGIGWLVSPHDGDQL CHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEEECCCCHHHH VKLLTQIVNDSELCNDMGHKAAQAVLCKYQLKHAVSKYQSLFRELIPKTTSLAQETLKK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400585; 10828401; 12057956 [H]