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The map label for this gene is yoaR [H]

Identifier: 158336672

GI number: 158336672

Start: 3582335

End: 3583099

Strand: Reverse

Name: yoaR [H]

Synonym: AM1_3540

Alternate gene names: 158336672

Gene position: 3583099-3582335 (Counterclockwise)

Preceding gene: 158336673

Following gene: 158336668

Centisome position: 55.09

GC content: 46.01

Gene sequence:

>765_bases
ATGGCAACCTCTCAGTGGTTACCGGCTAAACAAACAGTACGATCTGGCTTAAGACTGACACGACATCTCTTGCAAGGCGA
TATTTTCCGATTTGCCCATCAGCAGGCCCAACCACTCAGGGATAAATATTCCTACCTTTGGAGTCAGTTTGTAACTCCCA
TTCCTCAGCGCCCTGGCGCTAGTGCAATCAATGCCAACCGCCTCAAGAACCTACAAATTGCGGTCCAGCATCTAGATGGC
TTGATTCTCAAAGCTCATAAAGTCTTTAGTTTCTGGCATCAAGTGCCTCGTCCCACTCTCAGCAATGGTTATTGCGAAGG
CCCTGCCTTTTTCAATGGGACGGTCACAAAAGATGTTGGCGGTGGGCTGTGTTTAATCTCTACTAATTTATTCAATACAT
TTCTGTTGTCTGGCTGTGACATTCTAGAGCGTCATAACCATAGCATCGACCCTTATGGGGATCGTCGATTTTTTCCCTTA
GGCAGGGATGCAGCCGTCTTTTATGGCTATAAAGACTTGATCATCAACAATCATCAGACCGTTGATTTGCAATTAGCCCT
AGACATTTCTGATGACCAGGACCAAGTAAAATCTTCACTATGGGGTACTGAACCTAAAACTGCAAAACTCAAGGTTGAGT
CTGTGCGTAGGAATGAACGACCTGCTCCTGATTCCCAAGGAATGCCAGGCTACGAGGTTGAGACCACTCGTTTAGTTGCT
CATACGACTGATGTTGGCACGATCAATTGGCATCCAGACTATTGA

Upstream 100 bases:

>100_bases
CTGTAAACAGGCTAAGGGTTTTGCATGCTCCCACTAACACAAGTTAGTCACAAACTAAGGGTGGGTAAACTGGGTATGAC
AGTACGGGGGATCAAGCACT

Downstream 100 bases:

>100_bases
GCCGTATCAGCTTACCAACCTTGTAGCTATTCTTACTATCCTTCAGGGATACCCTCTGCCGCTTAAACCGGTCGATCAAG
AGCCCTTTCACCACCCCAGC

Product: vancomycin B-type resistance protein VanW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MATSQWLPAKQTVRSGLRLTRHLLQGDIFRFAHQQAQPLRDKYSYLWSQFVTPIPQRPGASAINANRLKNLQIAVQHLDG
LILKAHKVFSFWHQVPRPTLSNGYCEGPAFFNGTVTKDVGGGLCLISTNLFNTFLLSGCDILERHNHSIDPYGDRRFFPL
GRDAAVFYGYKDLIINNHQTVDLQLALDISDDQDQVKSSLWGTEPKTAKLKVESVRRNERPAPDSQGMPGYEVETTRLVA
HTTDVGTINWHPDY

Sequences:

>Translated_254_residues
MATSQWLPAKQTVRSGLRLTRHLLQGDIFRFAHQQAQPLRDKYSYLWSQFVTPIPQRPGASAINANRLKNLQIAVQHLDG
LILKAHKVFSFWHQVPRPTLSNGYCEGPAFFNGTVTKDVGGGLCLISTNLFNTFLLSGCDILERHNHSIDPYGDRRFFPL
GRDAAVFYGYKDLIINNHQTVDLQLALDISDDQDQVKSSLWGTEPKTAKLKVESVRRNERPAPDSQGMPGYEVETTRLVA
HTTDVGTINWHPDY
>Mature_253_residues
ATSQWLPAKQTVRSGLRLTRHLLQGDIFRFAHQQAQPLRDKYSYLWSQFVTPIPQRPGASAINANRLKNLQIAVQHLDGL
ILKAHKVFSFWHQVPRPTLSNGYCEGPAFFNGTVTKDVGGGLCLISTNLFNTFLLSGCDILERHNHSIDPYGDRRFFPLG
RDAAVFYGYKDLIINNHQTVDLQLALDISDDQDQVKSSLWGTEPKTAKLKVESVRRNERPAPDSQGMPGYEVETTRLVAH
TTDVGTINWHPDY

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 28699; Mature: 28568

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSQWLPAKQTVRSGLRLTRHLLQGDIFRFAHQQAQPLRDKYSYLWSQFVTPIPQRPGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SAINANRLKNLQIAVQHLDGLILKAHKVFSFWHQVPRPTLSNGYCEGPAFFNGTVTKDVG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCEEECCCC
GGLCLISTNLFNTFLLSGCDILERHNHSIDPYGDRRFFPLGRDAAVFYGYKDLIINNHQT
CCEEEEEHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEECCCCCCEEEECHHHEEECCCCE
VDLQLALDISDDQDQVKSSLWGTEPKTAKLKVESVRRNERPAPDSQGMPGYEVETTRLVA
EEEEEEEECCCCHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCEEEEEEEEE
HTTDVGTINWHPDY
EECCCCEEECCCCC
>Mature Secondary Structure 
ATSQWLPAKQTVRSGLRLTRHLLQGDIFRFAHQQAQPLRDKYSYLWSQFVTPIPQRPGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SAINANRLKNLQIAVQHLDGLILKAHKVFSFWHQVPRPTLSNGYCEGPAFFNGTVTKDVG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCEEECCCC
GGLCLISTNLFNTFLLSGCDILERHNHSIDPYGDRRFFPLGRDAAVFYGYKDLIINNHQT
CCEEEEEHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEECCCCCCEEEECHHHEEECCCCE
VDLQLALDISDDQDQVKSSLWGTEPKTAKLKVESVRRNERPAPDSQGMPGYEVETTRLVA
EEEEEEEECCCCHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCEEEEEEEEE
HTTDVGTINWHPDY
EECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]