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The map label for this gene is yahD [C]

Identifier: 158336628

GI number: 158336628

Start: 3529534

End: 3531270

Strand: Reverse

Name: yahD [C]

Synonym: AM1_3496

Alternate gene names: 158336628

Gene position: 3531270-3529534 (Counterclockwise)

Preceding gene: 158336629

Following gene: 158336624

Centisome position: 54.3

GC content: 51.07

Gene sequence:

>1737_bases
ATGAAAATCCACCAAGATGCGTACAACGGCGATCTGGAAAGCGTTCGGCAAGCACTGACTGAAGTACCCGATCTGGAAAT
CCAGGATCAAGACGGTGGGGAAGCGACTTATGGTCTTACCCCTATCCAGTGCGCTCTATCTAGCCCCATCGCTTCTCTAG
AAATTGTCCTCCTCTTATTGAACAAAGGCGCACAACTGCTTTTCTCGCCCAATAACCGCAAAACGGCTCTTTTTCTAGCC
ATCCAGTCAGGACGAATCGAGAAAATTCAGTGGGTGTTGGAGCAAGGGGCTGATATTACTCAAGCGGATGAAGAGGGACA
TGACGCCCTGATCACGGCCATGTTTAGTGCGGTCGCCGTCAATGAAACGGATCTGACGGCACTGATGCAGTTTCTGATCG
ATCAAGGTGCTCCTCTAAATGGCGAAACCTGTTGCGGGGAATCTGTATTGTCTGAATCTTCGCGGTGTGGCTGGTTTGCA
ATTGTGCAGTGCCTGTTAAGGGCGGGTAGTGATGCCACTATGTTGGGCTGGACGCCGCTGATGCATGCCGTTGTCCTGGG
CACTTTATCCGACATGGAAGCATTGTTGGAGACTGCTGACTTAAAGGCTGTCGATGCCTGGAAGCGCACCCCTTGGTTGC
TGAGTCTGCAGGTTGGCCACTTAGACAAAGCCAAATGTCTCTTGGCAGCTGGCTCTGATCCAGAGGTCACTGGATGGTAT
GGCACCGTTCCCCTGATGTATGCGATCGCATCCCGAAACCGTGCTCTGGTAGCCTGGCTGATTGAGATAGGGCAAGACGT
CAACGGCACAGACGACACGGGTGAACCACCTCTCTTATCCGCCGTGGAGCTAGATGATGTGGTCATCGCTCAACACCTCT
TGGCAGCAGGGGCGAAGCTCACCTATGTCAGTCAAGGCATCCGCAAATCTGAGCGGCACATTATTAAAAAGGCCAAGAGC
GGGGCGATGGCGAAGTTGCTTGTCACGGCAGGGGCTAAGCTACAAGATGTGAATCAAGAGGTTCGCTGCCAGTTAACCCA
GGTTGATTCATCGAGGTTCTATTCCGTCTCTCCCCAAATCTATCAGACCCAGAAACACCCAACGTTTGGGGCAACGAATC
CCGAGGAAATGTCTTTTCCCTTCTGGCGAGATATGGTAAAGCTGCGTTACTCAGCCTATGGGGCGCGTCACCACTATCGG
GATACAGAGACAGAAGAAGCGGGTCCGGTTTGGTCATTCAATCGTTATGGTCAATCCATCACGTTGTTGCCGGATGGCAG
GGTGATCGAAATTGCGGGTGAGCATGAAGATTACTACGATCCAGACTTTTATATCTACAACGATGTGGTGGTCTCGGATG
GTGAAGGCGGATTCACAATTTATGGCTATCCTCGGAATGTCTTTCCCCCCACTGATTTCCATACCGCTACCCTTGTGGAC
GCCCAAATCTATATCATTGGCAATCTCGGCTATCCCTGGGATCGAGTGATCGATGAAACCCCGGTGTATTGCTTAAACTG
CCATACATTTGTGATTACCAAGCTTGTGACTAGCGGACAGCCACCGGGCTGGATTAGTAATCATCAAGCGATGCTCACTA
ATAACCAGATTCATATTACGGGTGGGAATCGTTGGGTTCAGCAAGGCGATCATCTTGAGTATGTGGAGAACGATGTGGAG
TTCGTTCTTGATTTGAATGAGCTGTCCTGGCAGGTGCTGGTAGGAGATGCAATGTAG

Upstream 100 bases:

>100_bases
CCATCTCTCTAGCTATCTCACAACGACTGCTAAGCTACTGCCTTCGCAACGGCAGTGTTCCCAATGATGTTGCTGACCCA
AGGTTTGGGCACAGGACGCA

Downstream 100 bases:

>100_bases
TCAGGGGATGGCTTCGTTGGATACCTTCAATCTACAGATATTCAAACGCTATCCAGGTGACATTGGGAGGGGATTACCAC
ATAAGTTAATGCAGAATAAG

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MKIHQDAYNGDLESVRQALTEVPDLEIQDQDGGEATYGLTPIQCALSSPIASLEIVLLLLNKGAQLLFSPNNRKTALFLA
IQSGRIEKIQWVLEQGADITQADEEGHDALITAMFSAVAVNETDLTALMQFLIDQGAPLNGETCCGESVLSESSRCGWFA
IVQCLLRAGSDATMLGWTPLMHAVVLGTLSDMEALLETADLKAVDAWKRTPWLLSLQVGHLDKAKCLLAAGSDPEVTGWY
GTVPLMYAIASRNRALVAWLIEIGQDVNGTDDTGEPPLLSAVELDDVVIAQHLLAAGAKLTYVSQGIRKSERHIIKKAKS
GAMAKLLVTAGAKLQDVNQEVRCQLTQVDSSRFYSVSPQIYQTQKHPTFGATNPEEMSFPFWRDMVKLRYSAYGARHHYR
DTETEEAGPVWSFNRYGQSITLLPDGRVIEIAGEHEDYYDPDFYIYNDVVVSDGEGGFTIYGYPRNVFPPTDFHTATLVD
AQIYIIGNLGYPWDRVIDETPVYCLNCHTFVITKLVTSGQPPGWISNHQAMLTNNQIHITGGNRWVQQGDHLEYVENDVE
FVLDLNELSWQVLVGDAM

Sequences:

>Translated_578_residues
MKIHQDAYNGDLESVRQALTEVPDLEIQDQDGGEATYGLTPIQCALSSPIASLEIVLLLLNKGAQLLFSPNNRKTALFLA
IQSGRIEKIQWVLEQGADITQADEEGHDALITAMFSAVAVNETDLTALMQFLIDQGAPLNGETCCGESVLSESSRCGWFA
IVQCLLRAGSDATMLGWTPLMHAVVLGTLSDMEALLETADLKAVDAWKRTPWLLSLQVGHLDKAKCLLAAGSDPEVTGWY
GTVPLMYAIASRNRALVAWLIEIGQDVNGTDDTGEPPLLSAVELDDVVIAQHLLAAGAKLTYVSQGIRKSERHIIKKAKS
GAMAKLLVTAGAKLQDVNQEVRCQLTQVDSSRFYSVSPQIYQTQKHPTFGATNPEEMSFPFWRDMVKLRYSAYGARHHYR
DTETEEAGPVWSFNRYGQSITLLPDGRVIEIAGEHEDYYDPDFYIYNDVVVSDGEGGFTIYGYPRNVFPPTDFHTATLVD
AQIYIIGNLGYPWDRVIDETPVYCLNCHTFVITKLVTSGQPPGWISNHQAMLTNNQIHITGGNRWVQQGDHLEYVENDVE
FVLDLNELSWQVLVGDAM
>Mature_578_residues
MKIHQDAYNGDLESVRQALTEVPDLEIQDQDGGEATYGLTPIQCALSSPIASLEIVLLLLNKGAQLLFSPNNRKTALFLA
IQSGRIEKIQWVLEQGADITQADEEGHDALITAMFSAVAVNETDLTALMQFLIDQGAPLNGETCCGESVLSESSRCGWFA
IVQCLLRAGSDATMLGWTPLMHAVVLGTLSDMEALLETADLKAVDAWKRTPWLLSLQVGHLDKAKCLLAAGSDPEVTGWY
GTVPLMYAIASRNRALVAWLIEIGQDVNGTDDTGEPPLLSAVELDDVVIAQHLLAAGAKLTYVSQGIRKSERHIIKKAKS
GAMAKLLVTAGAKLQDVNQEVRCQLTQVDSSRFYSVSPQIYQTQKHPTFGATNPEEMSFPFWRDMVKLRYSAYGARHHYR
DTETEEAGPVWSFNRYGQSITLLPDGRVIEIAGEHEDYYDPDFYIYNDVVVSDGEGGFTIYGYPRNVFPPTDFHTATLVD
AQIYIIGNLGYPWDRVIDETPVYCLNCHTFVITKLVTSGQPPGWISNHQAMLTNNQIHITGGNRWVQQGDHLEYVENDVE
FVLDLNELSWQVLVGDAM

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI268607595, Length=345, Percent_Identity=28.1159420289855, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI62988328, Length=345, Percent_Identity=28.1159420289855, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI38683816, Length=334, Percent_Identity=27.2455089820359, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI38683807, Length=334, Percent_Identity=27.2455089820359, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI10863929, Length=338, Percent_Identity=27.810650887574, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI32967601, Length=295, Percent_Identity=24.7457627118644, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI46519147, Length=284, Percent_Identity=25.3521126760563, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI37620163, Length=284, Percent_Identity=25.3521126760563, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI70780355, Length=334, Percent_Identity=24.5508982035928, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI70780353, Length=334, Percent_Identity=24.5508982035928, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI70780357, Length=334, Percent_Identity=24.5508982035928, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI70780359, Length=334, Percent_Identity=24.5508982035928, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI215598574, Length=334, Percent_Identity=24.5508982035928, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI52426737, Length=303, Percent_Identity=28.3828382838284, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI188595682, Length=303, Percent_Identity=28.3828382838284, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI46519151, Length=298, Percent_Identity=28.8590604026846, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI46519154, Length=293, Percent_Identity=29.0102389078498, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI52426735, Length=302, Percent_Identity=28.1456953642384, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI55741641, Length=245, Percent_Identity=28.9795918367347, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI68131557, Length=286, Percent_Identity=25.1748251748252, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI225543463, Length=337, Percent_Identity=25.8160237388724, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI225543461, Length=337, Percent_Identity=25.8160237388724, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI30425444, Length=294, Percent_Identity=26.8707482993197, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI304361760, Length=240, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI304361757, Length=240, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI157743284, Length=371, Percent_Identity=25.3369272237197, Blast_Score=66, Evalue=8e-11,
Organism=Drosophila melanogaster, GI28571867, Length=341, Percent_Identity=26.9794721407625, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28571865, Length=341, Percent_Identity=26.9794721407625, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221330482, Length=295, Percent_Identity=27.4576271186441, Blast_Score=77, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221330480, Length=290, Percent_Identity=27.9310344827586, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221330474, Length=290, Percent_Identity=27.9310344827586, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI45551135, Length=290, Percent_Identity=27.9310344827586, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221330478, Length=290, Percent_Identity=27.9310344827586, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI221330476, Length=290, Percent_Identity=27.9310344827586, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI45550479, Length=290, Percent_Identity=27.9310344827586, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28573593, Length=290, Percent_Identity=27.9310344827586, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI281363919, Length=295, Percent_Identity=27.4576271186441, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281359521, Length=293, Percent_Identity=24.2320819112628, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI281359519, Length=293, Percent_Identity=24.2320819112628, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28558752, Length=293, Percent_Identity=24.2320819112628, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28558750, Length=293, Percent_Identity=24.2320819112628, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28558756, Length=293, Percent_Identity=24.2320819112628, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28558754, Length=293, Percent_Identity=24.2320819112628, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161082089, Length=272, Percent_Identity=27.5735294117647, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161082099, Length=271, Percent_Identity=27.3062730627306, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161082085, Length=271, Percent_Identity=27.3062730627306, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161082110, Length=271, Percent_Identity=27.3062730627306, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24650843, Length=255, Percent_Identity=28.2352941176471, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI161082096, Length=271, Percent_Identity=27.3062730627306, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161082081, Length=271, Percent_Identity=27.3062730627306, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082106, Length=271, Percent_Identity=27.3062730627306, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 63904; Mature: 63904

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHQDAYNGDLESVRQALTEVPDLEIQDQDGGEATYGLTPIQCALSSPIASLEIVLLLL
CCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCEECCCCHHHHHHCCCHHHHHHHHHHH
NKGAQLLFSPNNRKTALFLAIQSGRIEKIQWVLEQGADITQADEEGHDALITAMFSAVAV
CCCCEEEECCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHC
NETDLTALMQFLIDQGAPLNGETCCGESVLSESSRCGWFAIVQCLLRAGSDATMLGWTPL
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEECHHHH
MHAVVLGTLSDMEALLETADLKAVDAWKRTPWLLSLQVGHLDKAKCLLAAGSDPEVTGWY
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEE
GTVPLMYAIASRNRALVAWLIEIGQDVNGTDDTGEPPLLSAVELDDVVIAQHLLAAGAKL
CHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCE
TYVSQGIRKSERHIIKKAKSGAMAKLLVTAGAKLQDVNQEVRCQLTQVDSSRFYSVSPQI
EHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCHHHHCCHHHEEEEEEECCCCEEECCCHH
YQTQKHPTFGATNPEEMSFPFWRDMVKLRYSAYGARHHYRDTETEEAGPVWSFNRYGQSI
EECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHCCCEE
TLLPDGRVIEIAGEHEDYYDPDFYIYNDVVVSDGEGGFTIYGYPRNVFPPTDFHTATLVD
EEECCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEE
AQIYIIGNLGYPWDRVIDETPVYCLNCHTFVITKLVTSGQPPGWISNHQAMLTNNQIHIT
EEEEEEECCCCCHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEE
GGNRWVQQGDHLEYVENDVEFVLDLNELSWQVLVGDAM
CCCCEECCCCCHHHHHCCEEEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MKIHQDAYNGDLESVRQALTEVPDLEIQDQDGGEATYGLTPIQCALSSPIASLEIVLLLL
CCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCEECCCCHHHHHHCCCHHHHHHHHHHH
NKGAQLLFSPNNRKTALFLAIQSGRIEKIQWVLEQGADITQADEEGHDALITAMFSAVAV
CCCCEEEECCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHC
NETDLTALMQFLIDQGAPLNGETCCGESVLSESSRCGWFAIVQCLLRAGSDATMLGWTPL
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEECHHHH
MHAVVLGTLSDMEALLETADLKAVDAWKRTPWLLSLQVGHLDKAKCLLAAGSDPEVTGWY
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEE
GTVPLMYAIASRNRALVAWLIEIGQDVNGTDDTGEPPLLSAVELDDVVIAQHLLAAGAKL
CHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCE
TYVSQGIRKSERHIIKKAKSGAMAKLLVTAGAKLQDVNQEVRCQLTQVDSSRFYSVSPQI
EHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCHHHHCCHHHEEEEEEECCCCEEECCCHH
YQTQKHPTFGATNPEEMSFPFWRDMVKLRYSAYGARHHYRDTETEEAGPVWSFNRYGQSI
EECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHCCCEE
TLLPDGRVIEIAGEHEDYYDPDFYIYNDVVVSDGEGGFTIYGYPRNVFPPTDFHTATLVD
EEECCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEE
AQIYIIGNLGYPWDRVIDETPVYCLNCHTFVITKLVTSGQPPGWISNHQAMLTNNQIHIT
EEEEEEECCCCCHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEE
GGNRWVQQGDHLEYVENDVEFVLDLNELSWQVLVGDAM
CCCCEECCCCCHHHHHCCEEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA