| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is yueF [H]
Identifier: 158336614
GI number: 158336614
Start: 3517540
End: 3518634
Strand: Direct
Name: yueF [H]
Synonym: AM1_3482
Alternate gene names: 158336614
Gene position: 3517540-3518634 (Clockwise)
Preceding gene: 158336613
Following gene: 158336615
Centisome position: 54.09
GC content: 52.6
Gene sequence:
>1095_bases ATGAAGCCATCCGAACCTTCTTTTACCTTGTCGATTGCCAGTTTGATGCGTGTAGGAGTGATCAGTTTGGGGCTGCTGTT ACTGTGGCAACTCCAAAATTTAGTGGTGGTGCTGATGATTTCCATCGTCTTGGCCTCTACTTTGGCTCCGATTATTCAGC AGGTGGAAGCGTTACGAGCGCCTCGATGGTTGGCGGTGTTGGGGGTCTATATCAGTTTGATTGGAGCGGCGATCACGGCC ACCCTGGTGATTGGTCCGACGATCACAGAGCAAATTCAACGGATTGTCGCCGCACTACCGGGTTATTTAGATGCCCTGAC GACGCTGATCGAAGACTCGATTATGCAGTTGGGCATCAGTAAGCCAGAAGATTTGGGCATGATCAATCAGGTATTGGATC TACAAGCTCTGACGGCTTGGACCTTTCGGTCGAGTCAAAAGCTGATTCTCCAGTCCGTAGATATCACCAAAGGCTTATTG GGAGGGGTCTTTAACTTGCTGTTAGCGCTGATTTTGTCAGCCTATATGCTGTCCGATTCCCAACGCTTGCTGCAAGGGCT AGTGGCGCTTTTCCCTCAGCCCTGGGAACAGCGGTTGGCGGATCAAGTCCATCCCGTGAGTCAACGGATGGGGGCCTATA TCCAGGGTCGCCTACTGGTCTCGCTGATTTTGGGAACCACGGTGAGTATTGGCTTGAAGCTGATTGGCATTACGGAAGTG GCCTTGGGATTGGGGGCCATTGCGGGCCTGACTAATTTGATTCCCTTCTTTGGACCCGTGCTAGGGGCGATTCCAGCGTT GCTGGTGGCGGTTGCCCAGGGGGGCTGGACGGTGGTGTGGGTGTTTTTGCTGTTTGTGTTGATCCAAAATCTAGAAACCT ATGTCCTTGATCCGTTGGTAGTGAGTCCGTCGGTGAATGTGCCGCCCCTGTACCAACTATTAGCGGTATTGGGAGGCACC CAAGTGTTGGGAATTATTGGGGCCTTAATTGCCCCACCCTGGGTCGCGGCAGGAGGTGTCCTGATTGAAAATTTATACCT GCAACCCAAACGTGATGCAGAGCAGCAGACTCAGCCTGAGCCAGAGATGGGGTGA
Upstream 100 bases:
>100_bases AGCCCTTTGATCCGTTGCAGCTCCCCACCCAGATTGCAGATGTATTAGGCTGGCAGTTATAGCCGCCCGATCAAGGGCTT GATCCTTACTCTCCCCCAGC
Downstream 100 bases:
>100_bases CTGACGGCTGAGTTCAGATTCTTCATTTCCAAACTTGAGGGGTGATCCTCACATTTTCCCCAAGTTTGGAGAGTATTCTC CACATAAAGGATACTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKPSEPSFTLSIASLMRVGVISLGLLLLWQLQNLVVVLMISIVLASTLAPIIQQVEALRAPRWLAVLGVYISLIGAAITA TLVIGPTITEQIQRIVAALPGYLDALTTLIEDSIMQLGISKPEDLGMINQVLDLQALTAWTFRSSQKLILQSVDITKGLL GGVFNLLLALILSAYMLSDSQRLLQGLVALFPQPWEQRLADQVHPVSQRMGAYIQGRLLVSLILGTTVSIGLKLIGITEV ALGLGAIAGLTNLIPFFGPVLGAIPALLVAVAQGGWTVVWVFLLFVLIQNLETYVLDPLVVSPSVNVPPLYQLLAVLGGT QVLGIIGALIAPPWVAAGGVLIENLYLQPKRDAEQQTQPEPEMG
Sequences:
>Translated_364_residues MKPSEPSFTLSIASLMRVGVISLGLLLLWQLQNLVVVLMISIVLASTLAPIIQQVEALRAPRWLAVLGVYISLIGAAITA TLVIGPTITEQIQRIVAALPGYLDALTTLIEDSIMQLGISKPEDLGMINQVLDLQALTAWTFRSSQKLILQSVDITKGLL GGVFNLLLALILSAYMLSDSQRLLQGLVALFPQPWEQRLADQVHPVSQRMGAYIQGRLLVSLILGTTVSIGLKLIGITEV ALGLGAIAGLTNLIPFFGPVLGAIPALLVAVAQGGWTVVWVFLLFVLIQNLETYVLDPLVVSPSVNVPPLYQLLAVLGGT QVLGIIGALIAPPWVAAGGVLIENLYLQPKRDAEQQTQPEPEMG >Mature_364_residues MKPSEPSFTLSIASLMRVGVISLGLLLLWQLQNLVVVLMISIVLASTLAPIIQQVEALRAPRWLAVLGVYISLIGAAITA TLVIGPTITEQIQRIVAALPGYLDALTTLIEDSIMQLGISKPEDLGMINQVLDLQALTAWTFRSSQKLILQSVDITKGLL GGVFNLLLALILSAYMLSDSQRLLQGLVALFPQPWEQRLADQVHPVSQRMGAYIQGRLLVSLILGTTVSIGLKLIGITEV ALGLGAIAGLTNLIPFFGPVLGAIPALLVAVAQGGWTVVWVFLLFVLIQNLETYVLDPLVVSPSVNVPPLYQLLAVLGGT QVLGIIGALIAPPWVAAGGVLIENLYLQPKRDAEQQTQPEPEMG
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI1788838, Length=319, Percent_Identity=25.705329153605, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 38915; Mature: 38915
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSEPSFTLSIASLMRVGVISLGLLLLWQLQNLVVVLMISIVLASTLAPIIQQVEALRA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRWLAVLGVYISLIGAAITATLVIGPTITEQIQRIVAALPGYLDALTTLIEDSIMQLGIS CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC KPEDLGMINQVLDLQALTAWTFRSSQKLILQSVDITKGLLGGVFNLLLALILSAYMLSDS CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH QRLLQGLVALFPQPWEQRLADQVHPVSQRMGAYIQGRLLVSLILGTTVSIGLKLIGITEV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLGAIAGLTNLIPFFGPVLGAIPALLVAVAQGGWTVVWVFLLFVLIQNLETYVLDPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEE VSPSVNVPPLYQLLAVLGGTQVLGIIGALIAPPWVAAGGVLIENLYLQPKRDAEQQTQPE ECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCC PEMG CCCC >Mature Secondary Structure MKPSEPSFTLSIASLMRVGVISLGLLLLWQLQNLVVVLMISIVLASTLAPIIQQVEALRA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRWLAVLGVYISLIGAAITATLVIGPTITEQIQRIVAALPGYLDALTTLIEDSIMQLGIS CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC KPEDLGMINQVLDLQALTAWTFRSSQKLILQSVDITKGLLGGVFNLLLALILSAYMLSDS CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH QRLLQGLVALFPQPWEQRLADQVHPVSQRMGAYIQGRLLVSLILGTTVSIGLKLIGITEV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLGAIAGLTNLIPFFGPVLGAIPALLVAVAQGGWTVVWVFLLFVLIQNLETYVLDPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEE VSPSVNVPPLYQLLAVLGGTQVLGIIGALIAPPWVAAGGVLIENLYLQPKRDAEQQTQPE ECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCC PEMG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]