| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158336594
Identifier: 158336594
GI number: 158336594
Start: 3492997
End: 3494535
Strand: Reverse
Name: 158336594
Synonym: AM1_3458
Alternate gene names: NA
Gene position: 3494535-3492997 (Counterclockwise)
Preceding gene: 158336595
Following gene: 158336593
Centisome position: 53.73
GC content: 49.64
Gene sequence:
>1539_bases ATGCCCTCTCAACAATCCTTCAAACGACTGGCGGCCTTAGCCTTTGCTGCAGCCTTAATCATTGGCCAAATTCCAAACCC AGCAGCAGCTGAGCAACGGAATCTTGTCGCCCATCCCCGCACGTCCTATCAACTGTCCTTCTACAATCGTCATCGCCGTA GCTATCGGGTCGCTAGTGCGCTGCATTTTGCCCATAGTAAATTGCATGACGTGCTCTTACTGACGCCTTTCAAACAACAC ACCCAAGAAGATGCCAAACTCTACCAAGAAGTGTTGGATTACGACGAAAGCCCTCCTCGGATTGAACCACCGATGGAGTT GTTTGCACCCTTTGCAGCCCGTGCCACTTGGCGATTGTTTCGTACCATAGATTCCGTCCATCTCTTACACGAGATGACCG AAGATGTGATGTCTGACAAAGATATTGCTTGGCATGAGAAAGAAGAAAAGTTACTGGAGACTTACGACTACTATCGCAAG ACCTACAAGGATATTGCCTTAAGTCCTGCGCCCTTAGATATGACCATGCGGCGCGCAGCAGTGATGATGAAGCCTTACTT CGCGTTGACCCGCAACTATTACCCCAAGAACAATAATTTCTTCTATGCTGCTCACTGGTGGCATCCTGCCCTTTACGAGA CCATGATGATGAGCGGCAATGGCGATGCCCAAGATAAATTTATGAATCAGATGGAAGATCTGTTTGGTGAACAAGTCGTT CCTGCCCCACCAGGGCGGATGCTGTTGAGTTGGGAATTATCACCACGCTACAGCCGCTTATCCCCCGAGACCGCCAACGT CTTTGATAATCTTCATATGCTTCACGGCATTACCTACGATATTTTTGCCTATGATGGCTGGACCGTTGAGCAGAAACGCA CAGAGCTTTACCGCGTTTTGGGTGCCATGGCCTATAAGCCAGGAGATGAAAACCTAGTTCGTAAATTTGAACTGACGAAA CCAGAGGTAAACCCACTGGACTACAACGAGTGGGTTCAGGAGGTTGATGGTGAAATGACCCGGATGATGACCGAGATGCT GGATGAAATGATGCCCGTCATGATGCAGCACAGATCTTCCCCCTCCAGTGAAATGCAGCATCAGGGCATGGCTCACCATC AAGGCAGCAGATCTCAGCATCCTATGTCATCAATCATGAAACACCAAGGAACCGAACATTCCCACAGTGAGATGCATGGC AGTATGCAGCAGGAGGGCATGACGTCCCAGAGCGACAACATGGCTCAGCATGGGATGTCGCCAGAAATGCATCAAATGCA TCAGCAGTTGAAAGCCCAGCTCAAACTGAAGCTCACCCCAGGCATCCAAGACGGCGAACTTCCTGGATCATTTATGGACG CCATGATGGCACTGATGCCCCAAATGCAGATGCACCATGAGGGCATGAAACCTGGATCAATCAACCCGGTAATGGTAGAA GCGATGATCAAGGGATGGCAACAGAAGTATGGCAATCTGCCCGATGTTGAACCCATGCCCATGAGCGATGAACCTTCAGG CATTGCATTAGCTCAGTAA
Upstream 100 bases:
>100_bases CATTTCTTCATCTCATTCTGATTTCATATTGTTTTGCCAGGATTTTAGAAGGGATCGATCCATTACGCCCCAAGACGACT CATAGCACCTGAATAACGAT
Downstream 100 bases:
>100_bases GCAACCTAGTTTCAACCAGTTAGGTCCAGAGCCGCATCTGGGCTTCAAGCTTGCATGTTTTTTAACACAAGGAGTGTAGT TATTTTGCGTATTTCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MPSQQSFKRLAALAFAAALIIGQIPNPAAAEQRNLVAHPRTSYQLSFYNRHRRSYRVASALHFAHSKLHDVLLLTPFKQH TQEDAKLYQEVLDYDESPPRIEPPMELFAPFAARATWRLFRTIDSVHLLHEMTEDVMSDKDIAWHEKEEKLLETYDYYRK TYKDIALSPAPLDMTMRRAAVMMKPYFALTRNYYPKNNNFFYAAHWWHPALYETMMMSGNGDAQDKFMNQMEDLFGEQVV PAPPGRMLLSWELSPRYSRLSPETANVFDNLHMLHGITYDIFAYDGWTVEQKRTELYRVLGAMAYKPGDENLVRKFELTK PEVNPLDYNEWVQEVDGEMTRMMTEMLDEMMPVMMQHRSSPSSEMQHQGMAHHQGSRSQHPMSSIMKHQGTEHSHSEMHG SMQQEGMTSQSDNMAQHGMSPEMHQMHQQLKAQLKLKLTPGIQDGELPGSFMDAMMALMPQMQMHHEGMKPGSINPVMVE AMIKGWQQKYGNLPDVEPMPMSDEPSGIALAQ
Sequences:
>Translated_512_residues MPSQQSFKRLAALAFAAALIIGQIPNPAAAEQRNLVAHPRTSYQLSFYNRHRRSYRVASALHFAHSKLHDVLLLTPFKQH TQEDAKLYQEVLDYDESPPRIEPPMELFAPFAARATWRLFRTIDSVHLLHEMTEDVMSDKDIAWHEKEEKLLETYDYYRK TYKDIALSPAPLDMTMRRAAVMMKPYFALTRNYYPKNNNFFYAAHWWHPALYETMMMSGNGDAQDKFMNQMEDLFGEQVV PAPPGRMLLSWELSPRYSRLSPETANVFDNLHMLHGITYDIFAYDGWTVEQKRTELYRVLGAMAYKPGDENLVRKFELTK PEVNPLDYNEWVQEVDGEMTRMMTEMLDEMMPVMMQHRSSPSSEMQHQGMAHHQGSRSQHPMSSIMKHQGTEHSHSEMHG SMQQEGMTSQSDNMAQHGMSPEMHQMHQQLKAQLKLKLTPGIQDGELPGSFMDAMMALMPQMQMHHEGMKPGSINPVMVE AMIKGWQQKYGNLPDVEPMPMSDEPSGIALAQ >Mature_511_residues PSQQSFKRLAALAFAAALIIGQIPNPAAAEQRNLVAHPRTSYQLSFYNRHRRSYRVASALHFAHSKLHDVLLLTPFKQHT QEDAKLYQEVLDYDESPPRIEPPMELFAPFAARATWRLFRTIDSVHLLHEMTEDVMSDKDIAWHEKEEKLLETYDYYRKT YKDIALSPAPLDMTMRRAAVMMKPYFALTRNYYPKNNNFFYAAHWWHPALYETMMMSGNGDAQDKFMNQMEDLFGEQVVP APPGRMLLSWELSPRYSRLSPETANVFDNLHMLHGITYDIFAYDGWTVEQKRTELYRVLGAMAYKPGDENLVRKFELTKP EVNPLDYNEWVQEVDGEMTRMMTEMLDEMMPVMMQHRSSPSSEMQHQGMAHHQGSRSQHPMSSIMKHQGTEHSHSEMHGS MQQEGMTSQSDNMAQHGMSPEMHQMHQQLKAQLKLKLTPGIQDGELPGSFMDAMMALMPQMQMHHEGMKPGSINPVMVEA MIKGWQQKYGNLPDVEPMPMSDEPSGIALAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59105; Mature: 58974
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 9.0 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.8 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSQQSFKRLAALAFAAALIIGQIPNPAAAEQRNLVAHPRTSYQLSFYNRHRRSYRVASA CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHH LHFAHSKLHDVLLLTPFKQHTQEDAKLYQEVLDYDESPPRIEPPMELFAPFAARATWRLF HHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH RTIDSVHLLHEMTEDVMSDKDIAWHEKEEKLLETYDYYRKTYKDIALSPAPLDMTMRRAA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VMMKPYFALTRNYYPKNNNFFYAAHWWHPALYETMMMSGNGDAQDKFMNQMEDLFGEQVV HHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC PAPPGRMLLSWELSPRYSRLSPETANVFDNLHMLHGITYDIFAYDGWTVEQKRTELYRVL CCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHCCEEEEEEECCEEHHHHHHHHHHHH GAMAYKPGDENLVRKFELTKPEVNPLDYNEWVQEVDGEMTRMMTEMLDEMMPVMMQHRSS HHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSSEMQHQGMAHHQGSRSQHPMSSIMKHQGTEHSHSEMHGSMQQEGMTSQSDNMAQHGMS CHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHCHHHHCCCCCCCCHHHHCCCC PEMHQMHQQLKAQLKLKLTPGIQDGELPGSFMDAMMALMPQMQMHHEGMKPGSINPVMVE HHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AMIKGWQQKYGNLPDVEPMPMSDEPSGIALAQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSQQSFKRLAALAFAAALIIGQIPNPAAAEQRNLVAHPRTSYQLSFYNRHRRSYRVASA CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHH LHFAHSKLHDVLLLTPFKQHTQEDAKLYQEVLDYDESPPRIEPPMELFAPFAARATWRLF HHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH RTIDSVHLLHEMTEDVMSDKDIAWHEKEEKLLETYDYYRKTYKDIALSPAPLDMTMRRAA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VMMKPYFALTRNYYPKNNNFFYAAHWWHPALYETMMMSGNGDAQDKFMNQMEDLFGEQVV HHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC PAPPGRMLLSWELSPRYSRLSPETANVFDNLHMLHGITYDIFAYDGWTVEQKRTELYRVL CCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHCCEEEEEEECCEEHHHHHHHHHHHH GAMAYKPGDENLVRKFELTKPEVNPLDYNEWVQEVDGEMTRMMTEMLDEMMPVMMQHRSS HHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSSEMQHQGMAHHQGSRSQHPMSSIMKHQGTEHSHSEMHGSMQQEGMTSQSDNMAQHGMS CHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHCHHHHCCCCCCCCHHHHCCCC PEMHQMHQQLKAQLKLKLTPGIQDGELPGSFMDAMMALMPQMQMHHEGMKPGSINPVMVE HHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AMIKGWQQKYGNLPDVEPMPMSDEPSGIALAQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA