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The map label for this gene is 158336580

Identifier: 158336580

GI number: 158336580

Start: 3472787

End: 3474535

Strand: Reverse

Name: 158336580

Synonym: AM1_3444

Alternate gene names: NA

Gene position: 3474535-3472787 (Counterclockwise)

Preceding gene: 158336582

Following gene: 158336577

Centisome position: 53.42

GC content: 46.66

Gene sequence:

>1749_bases
ATGACGGAAACTGACACGAAACAAGCCCTCAAGATTATTCCTCTGGGTGGCCTTCATGAAATTGGCAAAAATACCTGTGT
CTTTGAATTTGAAGATGAAATTATCTTAGTAGATGCTGGGCTCGCATTTCCCACAGATGGTATGCACGGTGTCAATATTG
TGCTGCCAGACATGACCTATTTGCGTGAGAACCGCCACAAAATTAAGGGCATGATTGTAACCCATGGTCATGAAGATCAT
ATTGGAGGCATTGCGTTTCACTTAAAGCAAATCGATATTCCGGTCATTCATGGCCCTCGCCTCGCGATGGCTTTATTGCA
GCGAAAGCTGGAAGAAGCAGGGGTTGCGGGTAAAACAGAGCTTAAAACGGTTGCTCCCCGAGATATTGTGCGCTTAGGCT
CTCACTTCTTTGTGGAGTTTATTCGAAATACTCATTCCATGGCTGATAGCTTTACCGTCGCCATTCATACACCTATTGGT
GTGGTGATTTTCACAGGGGATTTCAAAATCGATCACACTCCCGTAGATGGCGAAAACTTCGACTTACAAAAGTTGGCTGA
ACATGGAGAGCAGGGCGTATTATGCCTGATTAGCGATTCAACCAATTCGGAAGTACCTGGTTTTACGCCTTCTGAACGCT
CGGTTTATCCTAATTTGGAGCGGGTGTTTTCTCAAGCGAAAGGACGTTTGTTGGTGACGACGTTTGCGTCGTCCGTACAC
CGCATCAACATGATTTTAGACATTGCTCAAAAACAGGGGAGAACAGTGTCTGTCGTTGGCCGATCCATGTTGAATGTGAT
TGCCCATGCTCGAAATCTGGGTTACATCAAATGTCCCGATAGTTTGTTTGAGCCCTTAAAAGCAATTCGGAATCTTCCCG
ATCATAAGATTTTAATCTTAACCACAGGATCTCAAGGGGAATCCATGGCGGCCTTATCTCGGATTGCTCGTAAGGAGCAC
CGTCAAATTCAAATTCGCCAAGGCGACACCGTGGTCTTTTCGGCAAACCCCATCCCCGGCAATACCATTGCGGTCGTCAA
CACCATTGATCAGTTGATGATGCAGGGGGCCAACGTTATCTATGGTCGCCATCATGGCATTCATGTCTCAGGCCATGGCT
GCCAAGAGGATCAAAAGCTGATGTTGAACTTAACTCGCCCCAAATTCTTCTTGCCAGTGCATGGTGAGCATCGCATGTTA
ATCAAACATGCTCAAACTGCTCAGAGTATGGGGATTCCGGAAGAAAACATGGTGATCATTAATAATGGAGATATGGTGGC
TTTGACACCTGACTCCATTCAGATTGATGGTAAGGTCCCTTCTGGGATTGAGCTCATGGATCGAGCCGGTATTTTAAAAG
CGCATGTTTTGGAAGAACGCCAACGCCTCGCCGAAGATGGGCTCGTAACGGTCGCTGCCACCATCGGACTGGATGGTCAA
CTATTGACAGCGCCTGAAGTTCATTTGCGAGGAGTCGTCACCACAATTACAAGTGATAAGTGGCAAGCGTGGGTACAAAG
CGCGGTTGAATTGGCCTTGAGAAACCGCTGGGACCAGTTTAGTCAATCAACGGACCATTCCATAGACTGGGATGGTCTTA
AAAGCTATATTGAGCGAGAGCTCCAAGGCTTATTAAGGCGGGAACTACAAACTAATGCCACCTTGCTACTGCTTTTACAA
CATCCACAACAGCCTATCGGCTTGAAAGCAAAGTATACGGAGAGAAGTAAAGCAACAGCTGCACGTTAA

Upstream 100 bases:

>100_bases
ACCCAACGCTCCACAACAAAATCCATCGCACTTCAATGCAGACAGTCCATTGCACAGTCTGCCCACTATCTAGCACAAGA
CTTTATAGCTAAGGAAACAT

Downstream 100 bases:

>100_bases
GTTTTGGAGGACCTGGCTTAGGCCGAGTCCATCTTATGACTCAGCCTAGGCAGTTATTTACGACGATACGGATGTTGTCA
CTTCCGGATTGAGAGTGGCA

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MTETDTKQALKIIPLGGLHEIGKNTCVFEFEDEIILVDAGLAFPTDGMHGVNIVLPDMTYLRENRHKIKGMIVTHGHEDH
IGGIAFHLKQIDIPVIHGPRLAMALLQRKLEEAGVAGKTELKTVAPRDIVRLGSHFFVEFIRNTHSMADSFTVAIHTPIG
VVIFTGDFKIDHTPVDGENFDLQKLAEHGEQGVLCLISDSTNSEVPGFTPSERSVYPNLERVFSQAKGRLLVTTFASSVH
RINMILDIAQKQGRTVSVVGRSMLNVIAHARNLGYIKCPDSLFEPLKAIRNLPDHKILILTTGSQGESMAALSRIARKEH
RQIQIRQGDTVVFSANPIPGNTIAVVNTIDQLMMQGANVIYGRHHGIHVSGHGCQEDQKLMLNLTRPKFFLPVHGEHRML
IKHAQTAQSMGIPEENMVIINNGDMVALTPDSIQIDGKVPSGIELMDRAGILKAHVLEERQRLAEDGLVTVAATIGLDGQ
LLTAPEVHLRGVVTTITSDKWQAWVQSAVELALRNRWDQFSQSTDHSIDWDGLKSYIERELQGLLRRELQTNATLLLLLQ
HPQQPIGLKAKYTERSKATAAR

Sequences:

>Translated_582_residues
MTETDTKQALKIIPLGGLHEIGKNTCVFEFEDEIILVDAGLAFPTDGMHGVNIVLPDMTYLRENRHKIKGMIVTHGHEDH
IGGIAFHLKQIDIPVIHGPRLAMALLQRKLEEAGVAGKTELKTVAPRDIVRLGSHFFVEFIRNTHSMADSFTVAIHTPIG
VVIFTGDFKIDHTPVDGENFDLQKLAEHGEQGVLCLISDSTNSEVPGFTPSERSVYPNLERVFSQAKGRLLVTTFASSVH
RINMILDIAQKQGRTVSVVGRSMLNVIAHARNLGYIKCPDSLFEPLKAIRNLPDHKILILTTGSQGESMAALSRIARKEH
RQIQIRQGDTVVFSANPIPGNTIAVVNTIDQLMMQGANVIYGRHHGIHVSGHGCQEDQKLMLNLTRPKFFLPVHGEHRML
IKHAQTAQSMGIPEENMVIINNGDMVALTPDSIQIDGKVPSGIELMDRAGILKAHVLEERQRLAEDGLVTVAATIGLDGQ
LLTAPEVHLRGVVTTITSDKWQAWVQSAVELALRNRWDQFSQSTDHSIDWDGLKSYIERELQGLLRRELQTNATLLLLLQ
HPQQPIGLKAKYTERSKATAAR
>Mature_581_residues
TETDTKQALKIIPLGGLHEIGKNTCVFEFEDEIILVDAGLAFPTDGMHGVNIVLPDMTYLRENRHKIKGMIVTHGHEDHI
GGIAFHLKQIDIPVIHGPRLAMALLQRKLEEAGVAGKTELKTVAPRDIVRLGSHFFVEFIRNTHSMADSFTVAIHTPIGV
VIFTGDFKIDHTPVDGENFDLQKLAEHGEQGVLCLISDSTNSEVPGFTPSERSVYPNLERVFSQAKGRLLVTTFASSVHR
INMILDIAQKQGRTVSVVGRSMLNVIAHARNLGYIKCPDSLFEPLKAIRNLPDHKILILTTGSQGESMAALSRIARKEHR
QIQIRQGDTVVFSANPIPGNTIAVVNTIDQLMMQGANVIYGRHHGIHVSGHGCQEDQKLMLNLTRPKFFLPVHGEHRMLI
KHAQTAQSMGIPEENMVIINNGDMVALTPDSIQIDGKVPSGIELMDRAGILKAHVLEERQRLAEDGLVTVAATIGLDGQL
LTAPEVHLRGVVTTITSDKWQAWVQSAVELALRNRWDQFSQSTDHSIDWDGLKSYIERELQGLLRRELQTNATLLLLLQH
PQQPIGLKAKYTERSKATAAR

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 64456; Mature: 64325

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETDTKQALKIIPLGGLHEIGKNTCVFEFEDEIILVDAGLAFPTDGMHGVNIVLPDMTY
CCCCCCCCEEEEEECCCHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCHHH
LRENRHKIKGMIVTHGHEDHIGGIAFHLKQIDIPVIHGPRLAMALLQRKLEEAGVAGKTE
HHCCCCEEEEEEEECCCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCCC
LKTVAPRDIVRLGSHFFVEFIRNTHSMADSFTVAIHTPIGVVIFTGDFKIDHTPVDGENF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCEEEECCCCCCCCC
DLQKLAEHGEQGVLCLISDSTNSEVPGFTPSERSVYPNLERVFSQAKGRLLVTTFASSVH
CHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHH
RINMILDIAQKQGRTVSVVGRSMLNVIAHARNLGYIKCPDSLFEPLKAIRNLPDHKILIL
HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCEEEEE
TTGSQGESMAALSRIARKEHRQIQIRQGDTVVFSANPIPGNTIAVVNTIDQLMMQGANVI
EECCCCCHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCEEEHHHHHHHHHCCCCEE
YGRHHGIHVSGHGCQEDQKLMLNLTRPKFFLPVHGEHRMLIKHAQTAQSMGIPEENMVII
EECCCEEEEECCCCCCCCEEEEEECCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCEEEE
NNGDMVALTPDSIQIDGKVPSGIELMDRAGILKAHVLEERQRLAEDGLVTVAATIGLDGQ
ECCCEEEECCCCEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCE
LLTAPEVHLRGVVTTITSDKWQAWVQSAVELALRNRWDQFSQSTDHSIDWDGLKSYIERE
EECCCCCEECEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LQGLLRRELQTNATLLLLLQHPQQPIGLKAKYTERSKATAAR
HHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
TETDTKQALKIIPLGGLHEIGKNTCVFEFEDEIILVDAGLAFPTDGMHGVNIVLPDMTY
CCCCCCCEEEEEECCCHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCHHH
LRENRHKIKGMIVTHGHEDHIGGIAFHLKQIDIPVIHGPRLAMALLQRKLEEAGVAGKTE
HHCCCCEEEEEEEECCCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCCC
LKTVAPRDIVRLGSHFFVEFIRNTHSMADSFTVAIHTPIGVVIFTGDFKIDHTPVDGENF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCEEEECCCCCCCCC
DLQKLAEHGEQGVLCLISDSTNSEVPGFTPSERSVYPNLERVFSQAKGRLLVTTFASSVH
CHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHH
RINMILDIAQKQGRTVSVVGRSMLNVIAHARNLGYIKCPDSLFEPLKAIRNLPDHKILIL
HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCEEEEE
TTGSQGESMAALSRIARKEHRQIQIRQGDTVVFSANPIPGNTIAVVNTIDQLMMQGANVI
EECCCCCHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCEEEHHHHHHHHHCCCCEE
YGRHHGIHVSGHGCQEDQKLMLNLTRPKFFLPVHGEHRMLIKHAQTAQSMGIPEENMVII
EECCCEEEEECCCCCCCCEEEEEECCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCEEEE
NNGDMVALTPDSIQIDGKVPSGIELMDRAGILKAHVLEERQRLAEDGLVTVAATIGLDGQ
ECCCEEEECCCCEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCE
LLTAPEVHLRGVVTTITSDKWQAWVQSAVELALRNRWDQFSQSTDHSIDWDGLKSYIERE
EECCCCCEECEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LQGLLRRELQTNATLLLLLQHPQQPIGLKAKYTERSKATAAR
HHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]