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The map label for this gene is dpsA [H]

Identifier: 158336545

GI number: 158336545

Start: 3441562

End: 3442089

Strand: Direct

Name: dpsA [H]

Synonym: AM1_3409

Alternate gene names: 158336545

Gene position: 3441562-3442089 (Clockwise)

Preceding gene: 158336541

Following gene: 158336549

Centisome position: 52.92

GC content: 49.43

Gene sequence:

>528_bases
ATGTCTACTGCTGTAGTTCAACCTTTCGGCCAGATAGCTGACAATCCAGTCTTGCTGGATCGGTCTGCTACTGAACCGAT
TTGCGAGGGTATGAATACTGCCCTGGCTAGTTTTCAGGCGTTGTATTTGCAATATCAAAAGCATCATTTTGTTGTCGAAG
GGGCTGAGTTTTACCAGCTCCACAACTTTTTCCAAGAGTGTGGGGATGCCACCAAAAGCCATGTTCATGATCTTGGCGAA
CGTCTAAATGGTTTAGGAGGGGTACCCGCCGCTAGTTTTAGCAAGCTAGCGGAGCTATGTTGTTTTGAACCCGAAGCAGA
TGGTGTGTATAACTGTCGAACCATGGTGGAGCATGACCTAGCTGCTGAACAGGCTGTGATCAAACTGCTTCGTAGCCAAG
CGTCCCAGGCAGAAAGTCTCGGAGATCGCGGCACTCGCTATCTATATGAGCAGATGCTGCTTGAGACAGAAGAGCGAGCC
TATCATCTGGCCCATTTTTTGGCCTCTGACACGCTGGTTGTGGCGTGA

Upstream 100 bases:

>100_bases
CTTTAAAGGCAAAGCTTGAAGCCAAACGCCCACAGGCATCTCAATTCCAGAGAAAAAGAGATGTCTGCCTGCACGTGCCA
TTTTCTGAGAGAGGAATATT

Downstream 100 bases:

>100_bases
TCCGGTAGTCGTCATGGTTTCTTTGTGGCGGCAATGGCCAGCTTTGCGCCTTCAATTTCGCGAATGCGATCCATCACCGT
CACAACGCGGCCATGCCCCA

Product: DNA protection during starvation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSTAVVQPFGQIADNPVLLDRSATEPICEGMNTALASFQALYLQYQKHHFVVEGAEFYQLHNFFQECGDATKSHVHDLGE
RLNGLGGVPAASFSKLAELCCFEPEADGVYNCRTMVEHDLAAEQAVIKLLRSQASQAESLGDRGTRYLYEQMLLETEERA
YHLAHFLASDTLVVA

Sequences:

>Translated_175_residues
MSTAVVQPFGQIADNPVLLDRSATEPICEGMNTALASFQALYLQYQKHHFVVEGAEFYQLHNFFQECGDATKSHVHDLGE
RLNGLGGVPAASFSKLAELCCFEPEADGVYNCRTMVEHDLAAEQAVIKLLRSQASQAESLGDRGTRYLYEQMLLETEERA
YHLAHFLASDTLVVA
>Mature_174_residues
STAVVQPFGQIADNPVLLDRSATEPICEGMNTALASFQALYLQYQKHHFVVEGAEFYQLHNFFQECGDATKSHVHDLGER
LNGLGGVPAASFSKLAELCCFEPEADGVYNCRTMVEHDLAAEQAVIKLLRSQASQAESLGDRGTRYLYEQMLLETEERAY
HLAHFLASDTLVVA

Specific function: Involved in protection of chromosomal DNA from damage under nutrient-limited and oxidative stress conditions. Binds heme [H]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 19386; Mature: 19255

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAVVQPFGQIADNPVLLDRSATEPICEGMNTALASFQALYLQYQKHHFVVEGAEFYQL
CCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHH
HNFFQECGDATKSHVHDLGERLNGLGGVPAASFSKLAELCCFEPEADGVYNCRTMVEHDL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AAEQAVIKLLRSQASQAESLGDRGTRYLYEQMLLETEERAYHLAHFLASDTLVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STAVVQPFGQIADNPVLLDRSATEPICEGMNTALASFQALYLQYQKHHFVVEGAEFYQL
CCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHH
HNFFQECGDATKSHVHDLGERLNGLGGVPAASFSKLAELCCFEPEADGVYNCRTMVEHDL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AAEQAVIKLLRSQASQAESLGDRGTRYLYEQMLLETEERAYHLAHFLASDTLVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]