Click here to switch to the map view.

The map label for this gene is yfiY [H]

Identifier: 158336538

GI number: 158336538

Start: 3433252

End: 3434292

Strand: Reverse

Name: yfiY [H]

Synonym: AM1_3402

Alternate gene names: 158336538

Gene position: 3434292-3433252 (Counterclockwise)

Preceding gene: 158336539

Following gene: 158336537

Centisome position: 52.81

GC content: 48.51

Gene sequence:

>1041_bases
ATGAGCATCGTTTTCCAGTCTCTATGCCTTGCACTACTCATCGGTGCTTTAACCGTAGCCTGTGGCAAGGCGGATAACCG
ACCCGAAGCATTTACTCCAAGCGATTGTGAACGCATTAAGCATGATGGAGGTGAAACTGAGATTTGTGGGCAACCCCAAA
CCATTGTTGCTATTGGCCCCAGCGTTTTAGAGTTGCTATTGGCTTTGGATATACAGCCTGTAGGCTATGCAGATTACTAT
GCCCTGCCGTTTACAGACTTTGACCAACCGCAATCCCAAATTCCTTATTTGGGGGAACGGCTAAAGGGCCAGGTCAAAAA
AGTGGGCACTTGGAACAGTCCTTCCTTGGAAGCCATTTTGAAACTCAAGCCGGACCTAATTGTCGGGAGTACTCTAGCGC
ATCAGGGGCAGTACTCACTGTTATCTCAAGCTGCTCCCACACTGCTGTTTTCCTATGGGGTCAAAGAGGAATGGAAGGCC
CAGCTTCGCAGGTTAGCTGAGGTATTGGGCCGTACTGAAAAGGCAGAGCAGGTGATTGTTACTCACAACCAATTGGTGGC
TGAGACTCGCAAACAACTACAGCTTGCTGTCCAAAAATATCCGCAAGTCTTGTTGTTGGCATCTGAGCAACTGGACCAAG
AGCTGGCGATTGAGAATAGCGACAGTCGCTGTGGTGGACTCCTTGAAAATCTAGGGTTTAGGGTACTAACGCCTAAAAAT
ATTGATACAGGGACACGCGGGGTTAACAATATTTCCCTTGAGTTATTGCCAGAGTTAAAATCTGACTGGATCTTTTTCCT
AGCCTGGAATAGTGATTTTAGCGATGCGGGATCGGATCTGGAAGGGCAGCAGATCTCAGCGGTGAAACAGCAGTGGCAGA
AGAATGCGATCGCACAATCGTTACCCGCCAGCAAATCGAACCAAGTGTACTTCCACAGTGCCTATGTCTGTCGCGCCCTA
CCGGGTCCCATTGGCACCGAGCTGTTACTCAAACAATTGCAAGCTGATTTACTGCAGGCAGTAAATTCTCCCACTCAATA
A

Upstream 100 bases:

>100_bases
TCGATGTTAATTTTATCCGCTCAGTGAATGGGGGGAGAGCTAGAGGCATCTACCCAGGGGAGCCATTCACTATTCGAGGA
TCTATCTCTGTAGAGTTGTA

Downstream 100 bases:

>100_bases
GCCCCAGCCCTTTTAGGAAAGCGAGCGTATGGCACGACTGAGATTGAAAACGATGGGCCTCCTGATGGCCTTGGCGATAG
TGGGCATAGCCTGTACCCGT

Product: iron(III) dicitrate ABC transporter periplasmic iron(III) dicitrate-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSIVFQSLCLALLIGALTVACGKADNRPEAFTPSDCERIKHDGGETEICGQPQTIVAIGPSVLELLLALDIQPVGYADYY
ALPFTDFDQPQSQIPYLGERLKGQVKKVGTWNSPSLEAILKLKPDLIVGSTLAHQGQYSLLSQAAPTLLFSYGVKEEWKA
QLRRLAEVLGRTEKAEQVIVTHNQLVAETRKQLQLAVQKYPQVLLLASEQLDQELAIENSDSRCGGLLENLGFRVLTPKN
IDTGTRGVNNISLELLPELKSDWIFFLAWNSDFSDAGSDLEGQQISAVKQQWQKNAIAQSLPASKSNQVYFHSAYVCRAL
PGPIGTELLLKQLQADLLQAVNSPTQ

Sequences:

>Translated_346_residues
MSIVFQSLCLALLIGALTVACGKADNRPEAFTPSDCERIKHDGGETEICGQPQTIVAIGPSVLELLLALDIQPVGYADYY
ALPFTDFDQPQSQIPYLGERLKGQVKKVGTWNSPSLEAILKLKPDLIVGSTLAHQGQYSLLSQAAPTLLFSYGVKEEWKA
QLRRLAEVLGRTEKAEQVIVTHNQLVAETRKQLQLAVQKYPQVLLLASEQLDQELAIENSDSRCGGLLENLGFRVLTPKN
IDTGTRGVNNISLELLPELKSDWIFFLAWNSDFSDAGSDLEGQQISAVKQQWQKNAIAQSLPASKSNQVYFHSAYVCRAL
PGPIGTELLLKQLQADLLQAVNSPTQ
>Mature_345_residues
SIVFQSLCLALLIGALTVACGKADNRPEAFTPSDCERIKHDGGETEICGQPQTIVAIGPSVLELLLALDIQPVGYADYYA
LPFTDFDQPQSQIPYLGERLKGQVKKVGTWNSPSLEAILKLKPDLIVGSTLAHQGQYSLLSQAAPTLLFSYGVKEEWKAQ
LRRLAEVLGRTEKAEQVIVTHNQLVAETRKQLQLAVQKYPQVLLLASEQLDQELAIENSDSRCGGLLENLGFRVLTPKNI
DTGTRGVNNISLELLPELKSDWIFFLAWNSDFSDAGSDLEGQQISAVKQQWQKNAIAQSLPASKSNQVYFHSAYVCRALP
GPIGTELLLKQLQADLLQAVNSPTQ

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=276, Percent_Identity=26.4492753623188, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 37985; Mature: 37854

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVFQSLCLALLIGALTVACGKADNRPEAFTPSDCERIKHDGGETEICGQPQTIVAIGP
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECH
SVLELLLALDIQPVGYADYYALPFTDFDQPQSQIPYLGERLKGQVKKVGTWNSPSLEAIL
HHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH
KLKPDLIVGSTLAHQGQYSLLSQAAPTLLFSYGVKEEWKAQLRRLAEVLGRTEKAEQVIV
HCCCCEEECHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCEEEH
THNQLVAETRKQLQLAVQKYPQVLLLASEQLDQELAIENSDSRCGGLLENLGFRVLTPKN
HHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCC
IDTGTRGVNNISLELLPELKSDWIFFLAWNSDFSDAGSDLEGQQISAVKQQWQKNAIAQS
CCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LPASKSNQVYFHSAYVCRALPGPIGTELLLKQLQADLLQAVNSPTQ
CCCCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIVFQSLCLALLIGALTVACGKADNRPEAFTPSDCERIKHDGGETEICGQPQTIVAIGP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECH
SVLELLLALDIQPVGYADYYALPFTDFDQPQSQIPYLGERLKGQVKKVGTWNSPSLEAIL
HHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH
KLKPDLIVGSTLAHQGQYSLLSQAAPTLLFSYGVKEEWKAQLRRLAEVLGRTEKAEQVIV
HCCCCEEECHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCEEEH
THNQLVAETRKQLQLAVQKYPQVLLLASEQLDQELAIENSDSRCGGLLENLGFRVLTPKN
HHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCC
IDTGTRGVNNISLELLPELKSDWIFFLAWNSDFSDAGSDLEGQQISAVKQQWQKNAIAQS
CCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LPASKSNQVYFHSAYVCRALPGPIGTELLLKQLQADLLQAVNSPTQ
CCCCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]