Click here to switch to the map view.

The map label for this gene is yfiY [H]

Identifier: 158336493

GI number: 158336493

Start: 3389963

End: 3390997

Strand: Reverse

Name: yfiY [H]

Synonym: AM1_3357

Alternate gene names: 158336493

Gene position: 3390997-3389963 (Counterclockwise)

Preceding gene: 158336494

Following gene: 158336489

Centisome position: 52.14

GC content: 46.09

Gene sequence:

>1035_bases
ATGTTGCTACTATGGCTAGTGCTAGCGATAAGCCTTGCAATCGGAATTCGGCGGCTACGTATACGTGGGGGCCGACGGTT
TCTCTGGCTCAGCGTTTCTGCCTGCCTGCTCCTGAGTCTGTTGATGAGTTGTGCATCGGATCCGTTACCAAACCTTCCTC
AACAGCGTTCCCCACTCGCTAAAGGCACTTTTTTATCCATAGAACATGCGATGGGAACCAGCCAAGTTCCTATCCAAGCT
CAACGAGTGATTACAGTAGACACAGCGGCATTAGATGCTGCTTTAGCATTAGGTGTCAAACCTGTTGGTTCCGTGGTTTA
TAGTCAATTCCCTGCCTATTTGGGAGACCAAACAGAAGGCATCGCATCCGTAGGAGAAGGGACTCAACCGAATTTAGAAA
CCATCCTTAGCCTGAAGCCCGACTTAATCTTAGGCAGTAAGATCAGCTCCGGCAAAATATACAAACATTTAGACCGAATT
GCACCAACGGTTTTAACTGAAGGAAGTGGCAGAGAAGGAGAATGGCACGAGAATTTTCGCTTATTTGCCAAAGCCTTAAA
TAAGGAGTCGGCAGGACGGCAGGTCTTGACAGACTATCAACAACGGGTCAAAGCGCTACAGCAGCAGTTAGTAGAGGTTG
ATCAAACCGTTGTTTCAGTGGTTGCTACAGGTCAAGGCCAGATTGGCTTATACACGTCGAACAGCTTTTCAGGCTCAGTG
CTGGAAGATATAGGATTTGATCGGCCCTCGAAACAAAAGAATGCCAAAGGATATGCTGTTCAAATTGCCCGAGAAGATTT
AGATAGCTTGAATGGCGATCTGCTCTTTTTAATCCATAGCCCTCAGATATCAGGCAGCTTTGACTATGACGGCTTTGTGT
CTGATCCGCTTTGGTCAAAATTGAGTGCTGTGCAGAACAAGAAAATTTATGAAGTTAATAGCGAAGTGTGGACAGCAGGC
CGTAATATTCTGGCTGCCAATCAAATCCTAGATGACATTGCTCAAATATTTTCTATCAGCATTTCCCCATCGTGA

Upstream 100 bases:

>100_bases
CAAGGCCGGACTTATAGCATTCGCTATAGTTTTGAGTTTTAAGTCCAGTTCAACCAGCACCTAGTTTCTTAGATTTTCAG
TTTGGTGGGAGTTCATCATC

Downstream 100 bases:

>100_bases
TCTGTGATTGAACAATATCTTCAGATTGATTCACTCATACTCCAAGCAATAACGATCGCGACTCGCTTTGAATCTAAAAC
ATTCCTAACTTTAAATCCCA

Product: iron(III) dicitrate ABC transporter

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MLLLWLVLAISLAIGIRRLRIRGGRRFLWLSVSACLLLSLLMSCASDPLPNLPQQRSPLAKGTFLSIEHAMGTSQVPIQA
QRVITVDTAALDAALALGVKPVGSVVYSQFPAYLGDQTEGIASVGEGTQPNLETILSLKPDLILGSKISSGKIYKHLDRI
APTVLTEGSGREGEWHENFRLFAKALNKESAGRQVLTDYQQRVKALQQQLVEVDQTVVSVVATGQGQIGLYTSNSFSGSV
LEDIGFDRPSKQKNAKGYAVQIAREDLDSLNGDLLFLIHSPQISGSFDYDGFVSDPLWSKLSAVQNKKIYEVNSEVWTAG
RNILAANQILDDIAQIFSISISPS

Sequences:

>Translated_344_residues
MLLLWLVLAISLAIGIRRLRIRGGRRFLWLSVSACLLLSLLMSCASDPLPNLPQQRSPLAKGTFLSIEHAMGTSQVPIQA
QRVITVDTAALDAALALGVKPVGSVVYSQFPAYLGDQTEGIASVGEGTQPNLETILSLKPDLILGSKISSGKIYKHLDRI
APTVLTEGSGREGEWHENFRLFAKALNKESAGRQVLTDYQQRVKALQQQLVEVDQTVVSVVATGQGQIGLYTSNSFSGSV
LEDIGFDRPSKQKNAKGYAVQIAREDLDSLNGDLLFLIHSPQISGSFDYDGFVSDPLWSKLSAVQNKKIYEVNSEVWTAG
RNILAANQILDDIAQIFSISISPS
>Mature_344_residues
MLLLWLVLAISLAIGIRRLRIRGGRRFLWLSVSACLLLSLLMSCASDPLPNLPQQRSPLAKGTFLSIEHAMGTSQVPIQA
QRVITVDTAALDAALALGVKPVGSVVYSQFPAYLGDQTEGIASVGEGTQPNLETILSLKPDLILGSKISSGKIYKHLDRI
APTVLTEGSGREGEWHENFRLFAKALNKESAGRQVLTDYQQRVKALQQQLVEVDQTVVSVVATGQGQIGLYTSNSFSGSV
LEDIGFDRPSKQKNAKGYAVQIAREDLDSLNGDLLFLIHSPQISGSFDYDGFVSDPLWSKLSAVQNKKIYEVNSEVWTAG
RNILAANQILDDIAQIFSISISPS

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=297, Percent_Identity=27.6094276094276, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786807, Length=222, Percent_Identity=26.5765765765766, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 37365; Mature: 37365

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLWLVLAISLAIGIRRLRIRGGRRFLWLSVSACLLLSLLMSCASDPLPNLPQQRSPLA
CHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KGTFLSIEHAMGTSQVPIQAQRVITVDTAALDAALALGVKPVGSVVYSQFPAYLGDQTEG
CCCEEEEHHHCCCCCCCCEEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
IASVGEGTQPNLETILSLKPDLILGSKISSGKIYKHLDRIAPTVLTEGSGREGEWHENFR
HHHCCCCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHH
LFAKALNKESAGRQVLTDYQQRVKALQQQLVEVDQTVVSVVATGQGQIGLYTSNSFSGSV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH
LEDIGFDRPSKQKNAKGYAVQIAREDLDSLNGDLLFLIHSPQISGSFDYDGFVSDPLWSK
HHHCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH
LSAVQNKKIYEVNSEVWTAGRNILAANQILDDIAQIFSISISPS
HHHHHCCCEEEECHHHHHHCCCHHHHHHHHHHHHHHHEECCCCC
>Mature Secondary Structure
MLLLWLVLAISLAIGIRRLRIRGGRRFLWLSVSACLLLSLLMSCASDPLPNLPQQRSPLA
CHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KGTFLSIEHAMGTSQVPIQAQRVITVDTAALDAALALGVKPVGSVVYSQFPAYLGDQTEG
CCCEEEEHHHCCCCCCCCEEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
IASVGEGTQPNLETILSLKPDLILGSKISSGKIYKHLDRIAPTVLTEGSGREGEWHENFR
HHHCCCCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHH
LFAKALNKESAGRQVLTDYQQRVKALQQQLVEVDQTVVSVVATGQGQIGLYTSNSFSGSV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH
LEDIGFDRPSKQKNAKGYAVQIAREDLDSLNGDLLFLIHSPQISGSFDYDGFVSDPLWSK
HHHCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH
LSAVQNKKIYEVNSEVWTAGRNILAANQILDDIAQIFSISISPS
HHHHHCCCEEEECHHHHHHCCCHHHHHHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]