| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336425
Identifier: 158336425
GI number: 158336425
Start: 3320451
End: 3320960
Strand: Reverse
Name: 158336425
Synonym: AM1_3289
Alternate gene names: NA
Gene position: 3320960-3320451 (Counterclockwise)
Preceding gene: 158336426
Following gene: 158336424
Centisome position: 51.06
GC content: 46.67
Gene sequence:
>510_bases ATGTCCAGTCAAGCTATCGCTTCAATTCAAACCCTCTTTCAAAGCCGGTTAGCAACTCTCGAGCATCTTTTAAAGACTGC TCAAGCCCATTTCAGTGATGAATCCTTTCTGCAAAAACGAATAGTGGCAGATATGCTGCCCTTCGGCACACAGATTGCGT TTACCTGCAATCAACCCCGAAATTTCGCCTTGTGGAGTGAGGGTAAACCTGCCGACAATCTTGATCCAGAGGTCACCTCC CTTGCCCACGCCTATGAGCACATCGCCAATACTCAAAGCATGCTTATAGACATTAGCGTTGCAGATGAAAAACTAGCTGA AATCACGCGCATTGACTTAGGCGATAATCTCTATCTTGAGCTGTCGGGAGGTGACTATATCCACGAATTCCTCATCCCTA ATTTCTACTTCCATCTGGTCACCGCCTACGACATCTTGCGTATGGCGGGTGTACCCATTGGCAAACGAGATTACATGATG CACTTGGTACCTTTCGTTAAACAGGGTTGA
Upstream 100 bases:
>100_bases CGAAGTGTGGCTTCAAAAACAGAAACTTAACCCCTAATGCTCCACAAATCGTTAGGCTAAATCAACAGACTTCATAGAAT CAGTTTTGAAGGAGCACATG
Downstream 100 bases:
>100_bases AGCCGACCTTAAAGTGCGGGCTGTCTCACTGATGGCCCCTACTGCTCCAAAGGGCTACTAGCCGATCTTGTTAAGATAAA ACAGTACCCTAGGGAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSSQAIASIQTLFQSRLATLEHLLKTAQAHFSDESFLQKRIVADMLPFGTQIAFTCNQPRNFALWSEGKPADNLDPEVTS LAHAYEHIANTQSMLIDISVADEKLAEITRIDLGDNLYLELSGGDYIHEFLIPNFYFHLVTAYDILRMAGVPIGKRDYMM HLVPFVKQG
Sequences:
>Translated_169_residues MSSQAIASIQTLFQSRLATLEHLLKTAQAHFSDESFLQKRIVADMLPFGTQIAFTCNQPRNFALWSEGKPADNLDPEVTS LAHAYEHIANTQSMLIDISVADEKLAEITRIDLGDNLYLELSGGDYIHEFLIPNFYFHLVTAYDILRMAGVPIGKRDYMM HLVPFVKQG >Mature_168_residues SSQAIASIQTLFQSRLATLEHLLKTAQAHFSDESFLQKRIVADMLPFGTQIAFTCNQPRNFALWSEGKPADNLDPEVTSL AHAYEHIANTQSMLIDISVADEKLAEITRIDLGDNLYLELSGGDYIHEFLIPNFYFHLVTAYDILRMAGVPIGKRDYMMH LVPFVKQG
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19047; Mature: 18916
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQAIASIQTLFQSRLATLEHLLKTAQAHFSDESFLQKRIVADMLPFGTQIAFTCNQPR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC NFALWSEGKPADNLDPEVTSLAHAYEHIANTQSMLIDISVADEKLAEITRIDLGDNLYLE CEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEEEHHHHHHHHHHHEECCCCEEEE LSGGDYIHEFLIPNFYFHLVTAYDILRMAGVPIGKRDYMMHLVPFVKQG ECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SSQAIASIQTLFQSRLATLEHLLKTAQAHFSDESFLQKRIVADMLPFGTQIAFTCNQPR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC NFALWSEGKPADNLDPEVTSLAHAYEHIANTQSMLIDISVADEKLAEITRIDLGDNLYLE CEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEEEHHHHHHHHHHHEECCCCEEEE LSGGDYIHEFLIPNFYFHLVTAYDILRMAGVPIGKRDYMMHLVPFVKQG ECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA