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The map label for this gene is ccmK [H]

Identifier: 158336416

GI number: 158336416

Start: 3313562

End: 3313888

Strand: Direct

Name: ccmK [H]

Synonym: AM1_3280

Alternate gene names: 158336416

Gene position: 3313562-3313888 (Clockwise)

Preceding gene: 158336408

Following gene: 158336417

Centisome position: 50.95

GC content: 48.32

Gene sequence:

>327_bases
ATGCCACAGGCAGTTGGAGCATTAGAGACCAAAGGATTCCCCCCTGCTTTAGCTGCAGCCGATGCGATGGTGAAAGCTGG
CCACGTGACCTTCGTCAGTCTTATTCAGTCATGTAGTGCACGCTTTACGGTGAATATACGAGGCGATGTTTCCGCGGTCA
GGATGGCCATGGATGCTGGGATAGCAGCGGTCAATAAAACGTCTGGTGGTTTGCTCGAAACTTGGATCATCATTCCTCGT
CCCCATGAAAATGTTGAAGCAGTTATGGATATTGAATATAACGATGAAGTGGAAGAGTTTCGCTGTGTAGTGGAAGAAGC
CGTTTAA

Upstream 100 bases:

>100_bases
GACCTTTGAGTATCCGTTTAGAGCCGTCTGATTTGGGGGGCAAGCGCTTTTGAAAAATTTGTTTCTAACCCTGTTACAGT
AATGTTTTAGGACAAACATC

Downstream 100 bases:

>100_bases
ACTTTATGGTCAATTCCCGTCACTAAAACATTGCCAGCTCCCTATGATTGACGACTAACGAGCCAGGCTTTGAGTAGGGG
CACATGACCCATATAAAATA

Product: carbon dioxide concentrating mechanism protein CcmK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MPQAVGALETKGFPPALAAADAMVKAGHVTFVSLIQSCSARFTVNIRGDVSAVRMAMDAGIAAVNKTSGGLLETWIIIPR
PHENVEAVMDIEYNDEVEEFRCVVEEAV

Sequences:

>Translated_108_residues
MPQAVGALETKGFPPALAAADAMVKAGHVTFVSLIQSCSARFTVNIRGDVSAVRMAMDAGIAAVNKTSGGLLETWIIIPR
PHENVEAVMDIEYNDEVEEFRCVVEEAV
>Mature_107_residues
PQAVGALETKGFPPALAAADAMVKAGHVTFVSLIQSCSARFTVNIRGDVSAVRMAMDAGIAAVNKTSGGLLETWIIIPRP
HENVEAVMDIEYNDEVEEFRCVVEEAV

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 11546; Mature: 11415

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQAVGALETKGFPPALAAADAMVKAGHVTFVSLIQSCSARFTVNIRGDVSAVRMAMDAG
CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCC
IAAVNKTSGGLLETWIIIPRPHENVEAVMDIEYNDEVEEFRCVVEEAV
CEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PQAVGALETKGFPPALAAADAMVKAGHVTFVSLIQSCSARFTVNIRGDVSAVRMAMDAG
CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCC
IAAVNKTSGGLLETWIIIPRPHENVEAVMDIEYNDEVEEFRCVVEEAV
CEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]