| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336410
Identifier: 158336410
GI number: 158336410
Start: 3310130
End: 3310750
Strand: Reverse
Name: 158336410
Synonym: AM1_3274
Alternate gene names: NA
Gene position: 3310750-3310130 (Counterclockwise)
Preceding gene: 158336411
Following gene: 158336409
Centisome position: 50.91
GC content: 44.61
Gene sequence:
>621_bases ATGGCTATCGTGTATGGCCATTCAGACATTGTTCAAGTTTTAATTCAAGCAGGTGCAGATTGTCTCTCTTTTTATAATCT GAGTGACCGCCCTGAATCCCTGTTAAATTCTGAAATTGAAGCGCAATTAGATGAGTTGAATGTTTCGTGTACCACTCTCT ATACAGCAGTGGGATTTGGTAATCCTCACATTGTCCAAATGCTGCTAGATGCAGGCGCTGTTGTCGATAATGGTGATGGT AATGATACGCCTCTCAATCTAGCCATTTGTCAGCAAAACCTGGCCATGATTCAACAATTAATCAGTGCTGGCAGTGATAT CAATGTCGATATGGAAGATGGTGAGCGTGCGGTCATGACTGCCGCCAACACCGGCAATTTAGAGATTGTCAAGACATTAG TGGATGCCGAAGCAGAGCTAGATACCTATAGTCAGGGCGAATCCGCAGTGTCCTTAGCAGCTCAAGGCGGACATGAAGAG GTTTACAACTACTTATCACCACTTGTTTCACAGGAAGATCGAGAATCTGTCCCACGAGACTTATTAGCTAGAGGGATCAA AAGGCAAAACCGTAGAAGTCGGCCACAACCCTCTCTCATCGAAGATTCCTCTCTAGAGTAA
Upstream 100 bases:
>100_bases CAATATAGCAATGGTGAAGACACTACTCGAGTCAGGGGTAGATTGCAATTCACCTAGCCATGAATATTACACCTATGAGC GTGAGTGGAGTCCGCTCATA
Downstream 100 bases:
>100_bases AAGTAAAAATATTTCAGGGCAGTATGACTCGAAAGGTCATCCACTCAGGTGATTAAGAATGGTAGAGATCGCCTTGAAAA AACCAGATCTGTACAGATTA
Product: ankyrin repeat-containing protein
Products: NA
Alternate protein names: Ankyrin Repeat-Containing Protein
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MAIVYGHSDIVQVLIQAGADCLSFYNLSDRPESLLNSEIEAQLDELNVSCTTLYTAVGFGNPHIVQMLLDAGAVVDNGDG NDTPLNLAICQQNLAMIQQLISAGSDINVDMEDGERAVMTAANTGNLEIVKTLVDAEAELDTYSQGESAVSLAAQGGHEE VYNYLSPLVSQEDRESVPRDLLARGIKRQNRRSRPQPSLIEDSSLE
Sequences:
>Translated_206_residues MAIVYGHSDIVQVLIQAGADCLSFYNLSDRPESLLNSEIEAQLDELNVSCTTLYTAVGFGNPHIVQMLLDAGAVVDNGDG NDTPLNLAICQQNLAMIQQLISAGSDINVDMEDGERAVMTAANTGNLEIVKTLVDAEAELDTYSQGESAVSLAAQGGHEE VYNYLSPLVSQEDRESVPRDLLARGIKRQNRRSRPQPSLIEDSSLE >Mature_205_residues AIVYGHSDIVQVLIQAGADCLSFYNLSDRPESLLNSEIEAQLDELNVSCTTLYTAVGFGNPHIVQMLLDAGAVVDNGDGN DTPLNLAICQQNLAMIQQLISAGSDINVDMEDGERAVMTAANTGNLEIVKTLVDAEAELDTYSQGESAVSLAAQGGHEEV YNYLSPLVSQEDRESVPRDLLARGIKRQNRRSRPQPSLIEDSSLE
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22252; Mature: 22121
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVYGHSDIVQVLIQAGADCLSFYNLSDRPESLLNSEIEAQLDELNVSCTTLYTAVGFG CEEEECCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC NPHIVQMLLDAGAVVDNGDGNDTPLNLAICQQNLAMIQQLISAGSDINVDMEDGERAVMT CHHHHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE AANTGNLEIVKTLVDAEAELDTYSQGESAVSLAAQGGHEEVYNYLSPLVSQEDRESVPRD ECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCHH LLARGIKRQNRRSRPQPSLIEDSSLE HHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AIVYGHSDIVQVLIQAGADCLSFYNLSDRPESLLNSEIEAQLDELNVSCTTLYTAVGFG EEEECCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC NPHIVQMLLDAGAVVDNGDGNDTPLNLAICQQNLAMIQQLISAGSDINVDMEDGERAVMT CHHHHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE AANTGNLEIVKTLVDAEAELDTYSQGESAVSLAAQGGHEEVYNYLSPLVSQEDRESVPRD ECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCHH LLARGIKRQNRRSRPQPSLIEDSSLE HHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA