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The map label for this gene is 158336356

Identifier: 158336356

GI number: 158336356

Start: 3256829

End: 3258085

Strand: Reverse

Name: 158336356

Synonym: AM1_3218

Alternate gene names: NA

Gene position: 3258085-3256829 (Counterclockwise)

Preceding gene: 158336360

Following gene: 158336355

Centisome position: 50.1

GC content: 50.91

Gene sequence:

>1257_bases
ATGAACATTCCCCAAAAATTTTCCACCCTGCTCCTAGGAACGGTTGCCGCCATGGTCTTGGCACCGCAAGTCACCCTCGC
CCTTAGCCCCGCTGAAATTAACAAAGTCGCCAAACAAATCACTGTGCGGGTCGATAGCCAAGCCCCCGGCTCTGGCGTAA
TTATCAAACGCAATGGCAATCGCTATACCGTTTTGACCGCAGCCCACGTTGTGGCCACCGTCGATGAATACGTCGTGATC
ACCAATGATGGCCAGGAATATCCCGTCAATGTGCAAACGATTACCAAATTTCCTGGGGTTGACTTAGCCTTACTGGAATT
TACCAGTGACCGCCCCTATACGGTGGTCAAAATTGGCGACTCTCAACAGCTCTCAGAAGGCAGCGAAAGCTACGTCGCCG
GGTTTCCCAGCCGAACTCAGGCGTTGACAGATATTATCTACAACTTCACCACAGGCACGATTACGGCCAATGCCACTCGT
CCCTTAAGTGATGGCTATGCCCTGGTTTATACCAACAACACTCTCCCCGGCATGAGTGGTGGACCCGTTCTAGATAAGGA
CGGCAAACTACTAGGCATTCATGGCCGTGCAGACACCACCACTACGGTTCAAAATCAAAATATCAACCCCGATATCTTTA
TCAAAACGGGGTTTAACCTCGGGATTCCGATTCATACTTTCTTGAAGATGGCCCCGGCCAATACCGTCACTACCCCCATT
AAACCCATTACCTCTATCCCCTCTGCACCTTCCAGTGCCTCTGACTTCTACGTGCAAGCCTTAGATCAATATCGTCTGGG
GAATATGGCCGGAGCGTTACGCAATACCACCCAGGCTATTAGCCAAAATTCTCAATTTGCCCCAGCCTATGCCCTGCGAG
GCAGCATTCGCCTCGTCAAACAAGATCAGACGGGAGCCTTACAGGATTTTAATCAGGCGATTCAGTTGGACAAAAATCTG
CTGCAAGCCTATATTGGTCGGGCTTTGGTGCAATCGTCTCTAGGGGATACGAGGGGTGCGATCGCAGATTACTCCCAGGC
CATTCAGCTCCAGGGAGACCACGCCATTCTCTACTACAACCGAGGGATTGTATATCTCAACCAAGGTCAACAAGGGGCCG
CCCTCACCGACTTACGCACCGCCGCCGATCTAGCGCTTAAAGACAACAACCAAGCTGATTATCAGCGAGCCTTAGAAGCG
ATCAATATTGCCTCCAAGAACTGCCGACAGTCGATTCATACCATTTGTGATCGTTAA

Upstream 100 bases:

>100_bases
CAAACAGGGTTAGGGTATCCTCGAACCAGAGTCATATGCTAACTAGGTAAGACATCCAAGCATCGGTTTATATGCCAATG
GCATATTTTTAGGACACTGC

Downstream 100 bases:

>100_bases
CTTTTTTCTCCTTCCAGATTCTATTTCTTAAGATCTGGAAACTGAATCTTTCTCACTACCGTCAAAACCTTTAAGGATGT
ACTGGACGCTACTTTCATGA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNIPQKFSTLLLGTVAAMVLAPQVTLALSPAEINKVAKQITVRVDSQAPGSGVIIKRNGNRYTVLTAAHVVATVDEYVVI
TNDGQEYPVNVQTITKFPGVDLALLEFTSDRPYTVVKIGDSQQLSEGSESYVAGFPSRTQALTDIIYNFTTGTITANATR
PLSDGYALVYTNNTLPGMSGGPVLDKDGKLLGIHGRADTTTTVQNQNINPDIFIKTGFNLGIPIHTFLKMAPANTVTTPI
KPITSIPSAPSSASDFYVQALDQYRLGNMAGALRNTTQAISQNSQFAPAYALRGSIRLVKQDQTGALQDFNQAIQLDKNL
LQAYIGRALVQSSLGDTRGAIADYSQAIQLQGDHAILYYNRGIVYLNQGQQGAALTDLRTAADLALKDNNQADYQRALEA
INIASKNCRQSIHTICDR

Sequences:

>Translated_418_residues
MNIPQKFSTLLLGTVAAMVLAPQVTLALSPAEINKVAKQITVRVDSQAPGSGVIIKRNGNRYTVLTAAHVVATVDEYVVI
TNDGQEYPVNVQTITKFPGVDLALLEFTSDRPYTVVKIGDSQQLSEGSESYVAGFPSRTQALTDIIYNFTTGTITANATR
PLSDGYALVYTNNTLPGMSGGPVLDKDGKLLGIHGRADTTTTVQNQNINPDIFIKTGFNLGIPIHTFLKMAPANTVTTPI
KPITSIPSAPSSASDFYVQALDQYRLGNMAGALRNTTQAISQNSQFAPAYALRGSIRLVKQDQTGALQDFNQAIQLDKNL
LQAYIGRALVQSSLGDTRGAIADYSQAIQLQGDHAILYYNRGIVYLNQGQQGAALTDLRTAADLALKDNNQADYQRALEA
INIASKNCRQSIHTICDR
>Mature_418_residues
MNIPQKFSTLLLGTVAAMVLAPQVTLALSPAEINKVAKQITVRVDSQAPGSGVIIKRNGNRYTVLTAAHVVATVDEYVVI
TNDGQEYPVNVQTITKFPGVDLALLEFTSDRPYTVVKIGDSQQLSEGSESYVAGFPSRTQALTDIIYNFTTGTITANATR
PLSDGYALVYTNNTLPGMSGGPVLDKDGKLLGIHGRADTTTTVQNQNINPDIFIKTGFNLGIPIHTFLKMAPANTVTTPI
KPITSIPSAPSSASDFYVQALDQYRLGNMAGALRNTTQAISQNSQFAPAYALRGSIRLVKQDQTGALQDFNQAIQLDKNL
LQAYIGRALVQSSLGDTRGAIADYSQAIQLQGDHAILYYNRGIVYLNQGQQGAALTDLRTAADLALKDNNQADYQRALEA
INIASKNCRQSIHTICDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 45026; Mature: 45026

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPQKFSTLLLGTVAAMVLAPQVTLALSPAEINKVAKQITVRVDSQAPGSGVIIKRNGN
CCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHEEEEEECCCCCCCCEEEEECCC
RYTVLTAAHVVATVDEYVVITNDGQEYPVNVQTITKFPGVDLALLEFTSDRPYTVVKIGD
EEEEEEHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECC
SQQLSEGSESYVAGFPSRTQALTDIIYNFTTGTITANATRPLSDGYALVYTNNTLPGMSG
CHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCC
GPVLDKDGKLLGIHGRADTTTTVQNQNINPDIFIKTGFNLGIPIHTFLKMAPANTVTTPI
CCEECCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCC
KPITSIPSAPSSASDFYVQALDQYRLGNMAGALRNTTQAISQNSQFAPAYALRGSIRLVK
CHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEE
QDQTGALQDFNQAIQLDKNLLQAYIGRALVQSSLGDTRGAIADYSQAIQLQGDHAILYYN
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHEEEECCCEEEEEEE
RGIVYLNQGQQGAALTDLRTAADLALKDNNQADYQRALEAINIASKNCRQSIHTICDR
CCEEEEECCCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIPQKFSTLLLGTVAAMVLAPQVTLALSPAEINKVAKQITVRVDSQAPGSGVIIKRNGN
CCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHEEEEEECCCCCCCCEEEEECCC
RYTVLTAAHVVATVDEYVVITNDGQEYPVNVQTITKFPGVDLALLEFTSDRPYTVVKIGD
EEEEEEHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECC
SQQLSEGSESYVAGFPSRTQALTDIIYNFTTGTITANATRPLSDGYALVYTNNTLPGMSG
CHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCC
GPVLDKDGKLLGIHGRADTTTTVQNQNINPDIFIKTGFNLGIPIHTFLKMAPANTVTTPI
CCEECCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCC
KPITSIPSAPSSASDFYVQALDQYRLGNMAGALRNTTQAISQNSQFAPAYALRGSIRLVK
CHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEE
QDQTGALQDFNQAIQLDKNLLQAYIGRALVQSSLGDTRGAIADYSQAIQLQGDHAILYYN
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHEEEECCCEEEEEEE
RGIVYLNQGQQGAALTDLRTAADLALKDNNQADYQRALEAINIASKNCRQSIHTICDR
CCEEEEECCCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]