Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158336343

Identifier: 158336343

GI number: 158336343

Start: 3242547

End: 3243206

Strand: Direct

Name: 158336343

Synonym: AM1_3205

Alternate gene names: NA

Gene position: 3242547-3243206 (Clockwise)

Preceding gene: 158336342

Following gene: 158336346

Centisome position: 49.86

GC content: 47.27

Gene sequence:

>660_bases
ATGGTTGCAACGGTTTTACCTGTTGAGCGTCAAGCCCTTGGAGAAAAACGCGTCAGTGTTAGTGGTTTGACCTGGGAAGC
CTATCAGAAAATTCTGCATGCCTTACCTAACAGTCGAGCGATTAGACTCACCTATGACCAAGGAACTTTAGAAATTGCGA
TGCCTCTGGAAGATCATGAATTTGCCCTGCGATTAATTGAGCGATTCATTGTGATCTTGGTGACAGCTATGGGAATGAAG
ATCAAAACCATGGGGTCCACAACCATGGATCGTCCAGATTTAGATCGGGGATCTGAACCTGATTGTGCCTATTACATTCA
AAATCAAGCGGTGGTGGCAGGCCGTAAGGTTGATTTCTCGCAAGATCCACCGCCAGATTTGGTAGTAGAAGTGGACATTA
CCAACACGGATATTGCTAAAGATCGGCTGTATGCATCGATGGGAGTGCCTGAGTTCTGGCGCTATAACGGGCAGGTGTGG
CGGATTTTTCAACTGCAAGGAGAAGCGTATCAGGAATGCGATCGCAGTCCCACTTTCGATTGGGTCAACAAAGAAAACCT
ATACCACTTCCTAGAACAAGCTCAACAGGATGAAATTGCTGCGGAGCAAGCGTTCCGAGCATGGGCACAAGAGCAATGCC
AGCAAAAGTTACAGCAGTGA

Upstream 100 bases:

>100_bases
GCCCTCGGTTCTTGGGCGGTGATTTTGGTGTTTATTCGATATCGGGGCTTGCTGTAAGGGGTTGGATACAATAGAGACAC
CCCACATCTAAAGCAGAGTT

Downstream 100 bases:

>100_bases
AACTGGCTGGGTTAGAGCCTGTTTGAGTACACATCTGCACAAGAATATTAGGGTGCCAGATAAAACACTTTATGGGAAAA
ATAAATAGGCTTTAACCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MVATVLPVERQALGEKRVSVSGLTWEAYQKILHALPNSRAIRLTYDQGTLEIAMPLEDHEFALRLIERFIVILVTAMGMK
IKTMGSTTMDRPDLDRGSEPDCAYYIQNQAVVAGRKVDFSQDPPPDLVVEVDITNTDIAKDRLYASMGVPEFWRYNGQVW
RIFQLQGEAYQECDRSPTFDWVNKENLYHFLEQAQQDEIAAEQAFRAWAQEQCQQKLQQ

Sequences:

>Translated_219_residues
MVATVLPVERQALGEKRVSVSGLTWEAYQKILHALPNSRAIRLTYDQGTLEIAMPLEDHEFALRLIERFIVILVTAMGMK
IKTMGSTTMDRPDLDRGSEPDCAYYIQNQAVVAGRKVDFSQDPPPDLVVEVDITNTDIAKDRLYASMGVPEFWRYNGQVW
RIFQLQGEAYQECDRSPTFDWVNKENLYHFLEQAQQDEIAAEQAFRAWAQEQCQQKLQQ
>Mature_219_residues
MVATVLPVERQALGEKRVSVSGLTWEAYQKILHALPNSRAIRLTYDQGTLEIAMPLEDHEFALRLIERFIVILVTAMGMK
IKTMGSTTMDRPDLDRGSEPDCAYYIQNQAVVAGRKVDFSQDPPPDLVVEVDITNTDIAKDRLYASMGVPEFWRYNGQVW
RIFQLQGEAYQECDRSPTFDWVNKENLYHFLEQAQQDEIAAEQAFRAWAQEQCQQKLQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25205; Mature: 25205

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATVLPVERQALGEKRVSVSGLTWEAYQKILHALPNSRAIRLTYDQGTLEIAMPLEDHE
CCEEECCHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHH
FALRLIERFIVILVTAMGMKIKTMGSTTMDRPDLDRGSEPDCAYYIQNQAVVAGRKVDFS
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCC
QDPPPDLVVEVDITNTDIAKDRLYASMGVPEFWRYNGQVWRIFQLQGEAYQECDRSPTFD
CCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHCCCCEEEEEEECCHHHHHHCCCCCCC
WVNKENLYHFLEQAQQDEIAAEQAFRAWAQEQCQQKLQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVATVLPVERQALGEKRVSVSGLTWEAYQKILHALPNSRAIRLTYDQGTLEIAMPLEDHE
CCEEECCHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHH
FALRLIERFIVILVTAMGMKIKTMGSTTMDRPDLDRGSEPDCAYYIQNQAVVAGRKVDFS
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCC
QDPPPDLVVEVDITNTDIAKDRLYASMGVPEFWRYNGQVWRIFQLQGEAYQECDRSPTFD
CCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHCCCCEEEEEEECCHHHHHHCCCCCCC
WVNKENLYHFLEQAQQDEIAAEQAFRAWAQEQCQQKLQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA