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The map label for this gene is ybbI [C]

Identifier: 158336325

GI number: 158336325

Start: 3222766

End: 3223722

Strand: Reverse

Name: ybbI [C]

Synonym: AM1_3187

Alternate gene names: 158336325

Gene position: 3223722-3222766 (Counterclockwise)

Preceding gene: 158336326

Following gene: 158336324

Centisome position: 49.57

GC content: 46.5

Gene sequence:

>957_bases
ATGACGACTGGACTGCTCATTGGCCAATTAGCCAGTAAATTTGGTGTCTCGCCTCAAGCAATTCGCTATTATGAGCAACT
TGGACTCCTGAAACAACCCGAACGGAATCGATCCGGCTATCGTCTCTACACCACAGCCGCTCAAAACCGATTACAAATCA
TTCGCAGTGCCCAAAATTTTGGCCTCTCCCTACACGAAATTAAAGAACTGCTAGACCTTGGTGAACATTCCAAAGATGCA
CAACAGCGCATGCAGCAAATGGTAGCCCACCATGTCGAAGAATTAGACCAACAGCTCGCAGAACTCAACCATTCTCGACA
ACAACTAGGACGTCGTTTTGAACAATTACAGCAGCTGAGTACGGTCGGCCCCCAATCTCAATCTCTTCTCAAATTGCTAC
AAACAATTGAAGAGCATAGTCATGCAGATCTGGAAGGAGATGAAGATATTAGCCGAAGCATATTGGCAAAATATGCAGCA
GGTGAACGCCATTTCGCAGGTATGAAGCTGATTGGAGCTAAATTGAGCGGCACTCTCCTCAGCCATAGCAATTTCAATCG
GGCTGAACTGATGTTGGCGAGTTTAAACGAAACTGCCCTAGAACAATGCACGTTTCGCGAAGCCTATCTGAGTGGAGCCG
ATATGATTGGTGCTTACCTCAAACAGGCCGATTTATCCCATGCGGTTCTGATTGGTACAGATTTAAGTGAAACCACCTTA
ACAGACGCCAGTTTAATTGGCAGTAATTTGGGTGGCGCTTGCTTATGTGAAGCCGACCTGCGAGGTGCCAACCTCAGCGA
AGCCATCCTTATGGGAGCCAATTTACAGGGAGCAGATTTACGAGGGGTCAACTTATTTGGCAGCAATTTAATTGATGCCA
ATCTTGACGATGTGATTGTGGATGAACCCATCGTTGTGGATACCTCAACCGTTAGCTATCCACAGCCTGTTCCTTAA

Upstream 100 bases:

>100_bases
TGCTGGAGCTTGTCGTCTTTACTCCGCTAAATTGCCTTTTTATTTGGGCATCCTAAGAATAACCGATAAAAAACTTGGAT
TTCTAATCCCTGATAATGAA

Downstream 100 bases:

>100_bases
CTCCATTTAAACCCTCATTTCTAATCTACTGGACTCCATCAATGGGTGAAGTCCACAAACCGTCCTGCCTATCCATGTCA
ATACATAAGTTTTTTTTATA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTTGLLIGQLASKFGVSPQAIRYYEQLGLLKQPERNRSGYRLYTTAAQNRLQIIRSAQNFGLSLHEIKELLDLGEHSKDA
QQRMQQMVAHHVEELDQQLAELNHSRQQLGRRFEQLQQLSTVGPQSQSLLKLLQTIEEHSHADLEGDEDISRSILAKYAA
GERHFAGMKLIGAKLSGTLLSHSNFNRAELMLASLNETALEQCTFREAYLSGADMIGAYLKQADLSHAVLIGTDLSETTL
TDASLIGSNLGGACLCEADLRGANLSEAILMGANLQGADLRGVNLFGSNLIDANLDDVIVDEPIVVDTSTVSYPQPVP

Sequences:

>Translated_318_residues
MTTGLLIGQLASKFGVSPQAIRYYEQLGLLKQPERNRSGYRLYTTAAQNRLQIIRSAQNFGLSLHEIKELLDLGEHSKDA
QQRMQQMVAHHVEELDQQLAELNHSRQQLGRRFEQLQQLSTVGPQSQSLLKLLQTIEEHSHADLEGDEDISRSILAKYAA
GERHFAGMKLIGAKLSGTLLSHSNFNRAELMLASLNETALEQCTFREAYLSGADMIGAYLKQADLSHAVLIGTDLSETTL
TDASLIGSNLGGACLCEADLRGANLSEAILMGANLQGADLRGVNLFGSNLIDANLDDVIVDEPIVVDTSTVSYPQPVP
>Mature_317_residues
TTGLLIGQLASKFGVSPQAIRYYEQLGLLKQPERNRSGYRLYTTAAQNRLQIIRSAQNFGLSLHEIKELLDLGEHSKDAQ
QRMQQMVAHHVEELDQQLAELNHSRQQLGRRFEQLQQLSTVGPQSQSLLKLLQTIEEHSHADLEGDEDISRSILAKYAAG
ERHFAGMKLIGAKLSGTLLSHSNFNRAELMLASLNETALEQCTFREAYLSGADMIGAYLKQADLSHAVLIGTDLSETTLT
DASLIGSNLGGACLCEADLRGANLSEAILMGANLQGADLRGVNLFGSNLIDANLDDVIVDEPIVVDTSTVSYPQPVP

Specific function: Copper responsive transcription regulator [C]

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Escherichia coli, GI1786695, Length=107, Percent_Identity=36.4485981308411, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789687, Length=108, Percent_Identity=36.1111111111111, Blast_Score=65, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221377802, Length=162, Percent_Identity=32.7160493827161, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 34767; Mature: 34636

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGLLIGQLASKFGVSPQAIRYYEQLGLLKQPERNRSGYRLYTTAAQNRLQIIRSAQNF
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
GLSLHEIKELLDLGEHSKDAQQRMQQMVAHHVEELDQQLAELNHSRQQLGRRFEQLQQLS
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGPQSQSLLKLLQTIEEHSHADLEGDEDISRSILAKYAAGERHFAGMKLIGAKLSGTLL
HCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH
SHSNFNRAELMLASLNETALEQCTFREAYLSGADMIGAYLKQADLSHAVLIGTDLSETTL
CCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHHH
TDASLIGSNLGGACLCEADLRGANLSEAILMGANLQGADLRGVNLFGSNLIDANLDDVIV
HHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCEEE
DEPIVVDTSTVSYPQPVP
CCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TTGLLIGQLASKFGVSPQAIRYYEQLGLLKQPERNRSGYRLYTTAAQNRLQIIRSAQNF
CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
GLSLHEIKELLDLGEHSKDAQQRMQQMVAHHVEELDQQLAELNHSRQQLGRRFEQLQQLS
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGPQSQSLLKLLQTIEEHSHADLEGDEDISRSILAKYAAGERHFAGMKLIGAKLSGTLL
HCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH
SHSNFNRAELMLASLNETALEQCTFREAYLSGADMIGAYLKQADLSHAVLIGTDLSETTL
CCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHHH
TDASLIGSNLGGACLCEADLRGANLSEAILMGANLQGADLRGVNLFGSNLIDANLDDVIV
HHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCEEE
DEPIVVDTSTVSYPQPVP
CCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA