| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158336282
Identifier: 158336282
GI number: 158336282
Start: 3170791
End: 3172143
Strand: Reverse
Name: 158336282
Synonym: AM1_3144
Alternate gene names: NA
Gene position: 3172143-3170791 (Counterclockwise)
Preceding gene: 158336283
Following gene: 158336280
Centisome position: 48.77
GC content: 35.11
Gene sequence:
>1353_bases ATGTCTTTTTCTCAAATAATTCAAATTGTAATCTATCTGATTTTTATTTATTTGCTTTTGTCTCTAATTGTCAGTGAGAT TCAAGAAGCAATCTCTTCGATTCTTGAATTTAGAGCAAATCGATTAAAAACATCACTTTTTATATTGTTTGGTGAAGATA AAGTTGATGCCTACAATATGCCTAGTGAAAATGACGAGAATGATGGAAATAAAAATAGCAAAAAAAGTAAGAAATCTCTT ACTAATCTTTTATATGAAAGTCCATTAATAGCATCATTGAATCAACGAACATACAAAAATTATGTAAGAAGATTATGGCA GTTTATTCTAAGTATTTTTCTAGAAAATCATCGTAGCACAAAATTTAGATTTTCTACAGGACCTTCATATATTGACTCTT CTGAGACTTTTGCAAATGCACTAATCGATACATTGCAAGATGAACTATCTCAACTAGATTCTCCCCAATATCTAAAGAAT GATGATACTGTTGATATTGTCACTAACAAGCTACAGTATTTAGAACCAAAAATTGCAGGAATATCGTCACTAATAAGAAT TACAGAAGCCTTAAGAATCCAAAGTAGCAATGCTACGTTGGCGGATTTTAGTGAGCAAATTCAGAAAATCTTTGTTAGTG TCCAGAAAAGATCTTCAGGGGTATACAAGCGTAATGCTAGAGGTGTATCTTTCCTTTTAGGTTTTATGGTCGCGGTTATT GCTAATGCTGATACTTTTCAAATCTTGCGTAGCTTAAACCATTCACCTACAAAATATACAACCTCGCTTTCTACAGCTAT TGAAGAAAATTCAGAGTTGTTTCGCTGTGACTCTAAACAATCAGAGGGCAATCAAAACACTCAAGACACCCCTTCTCTAG ACTGTATTGATAACTTTGTTTCTGAAATAAATCCTATCCTTGAGTCCATAGGCCCTTTACCTCTTGGTTGGAACTATACA CCGCCAGAAAAATCAGATCCGTCATCTCAAGCTAAGAAAGATCAGAAAATATCTGTAATAGACAAAGCTTCTCCTTCTAC TAAAGAAGAAGAGCCTACTCAAGAAAACCAGCAGAAACCACTATCTGAAGCGGAACAGAACTCGAAAACTATCCAGACTG AACAGCCGTCTTCATCAGAACAGCCTTCTGACTCACAGCAAAATGAACCAAAAATTACTTGGACCAAAATTACACAACAA ATCAACCATCAAGGTGGCTTATTTAAAGCCACACTTGGCTGGTTAGTAACTGCTATTGCAATTGCCATGGGAGCTCCATT CTGGTTTGACTTATTAGGTCGGATTTTAAATGTTCGGAATGCCGGTGCTCCTCCTAATGAAGAAAAAAGCTAA
Upstream 100 bases:
>100_bases AATAGCGATATCTTTGTAGTATTTTACATTTCAATGCAGATCATTATGATAGATAATTGCTATTAATAAATCATATAAAA TTCTATCGTTTATACTATTT
Downstream 100 bases:
>100_bases ATCTTTTATCATCTAAGATCAAGAAGCTTAATTCACGTTGGCTGAGGCATAAGTGATAGAGAATACGATGATCAAAATAG ATCTAAATCAGTAACAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNMPSENDENDGNKNSKKSKKSL TNLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRSTKFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKN DDTVDIVTNKLQYLEPKIAGISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVI ANADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFVSEINPILESIGPLPLGWNYT PPEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKPLSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQ INHQGGLFKATLGWLVTAIAIAMGAPFWFDLLGRILNVRNAGAPPNEEKS
Sequences:
>Translated_450_residues MSFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNMPSENDENDGNKNSKKSKKSL TNLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRSTKFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKN DDTVDIVTNKLQYLEPKIAGISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVI ANADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFVSEINPILESIGPLPLGWNYT PPEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKPLSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQ INHQGGLFKATLGWLVTAIAIAMGAPFWFDLLGRILNVRNAGAPPNEEKS >Mature_449_residues SFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNMPSENDENDGNKNSKKSKKSLT NLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRSTKFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKND DTVDIVTNKLQYLEPKIAGISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVIA NADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFVSEINPILESIGPLPLGWNYTP PEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKPLSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQI NHQGGLFKATLGWLVTAIAIAMGAPFWFDLLGRILNVRNAGAPPNEEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50590; Mature: 50459
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCC PSENDENDGNKNSKKSKKSLTNLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRST CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKNDDTVDIVTNKLQYLEPKIAG EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCHHHHH ISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH ANADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFV CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHH SEINPILESIGPLPLGWNYTPPEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKP HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHCC LSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQINHQGGLFKATLGWLVTAIA HHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH IAMGAPFWFDLLGRILNVRNAGAPPNEEKS HHHCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCC PSENDENDGNKNSKKSKKSLTNLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRST CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKNDDTVDIVTNKLQYLEPKIAG EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCHHHHH ISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH ANADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFV CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHH SEINPILESIGPLPLGWNYTPPEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKP HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHCC LSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQINHQGGLFKATLGWLVTAIA HHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH IAMGAPFWFDLLGRILNVRNAGAPPNEEKS HHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA