| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336246
Identifier: 158336246
GI number: 158336246
Start: 3137610
End: 3138125
Strand: Reverse
Name: 158336246
Synonym: AM1_3108
Alternate gene names: NA
Gene position: 3138125-3137610 (Counterclockwise)
Preceding gene: 158336249
Following gene: 158336244
Centisome position: 48.25
GC content: 43.99
Gene sequence:
>516_bases ATGAGTACCGACTATTCTTGGCTTATATGCCATCCTTCCGAACGAGATGAGCAAATTTTGCAACCTTTATTTGAGGAAGC TGTGAAGTCAGCTACTTTGCCAACTCAATCCAAATCTGTTCTACAGAAGTGGCAGCAGAATCCCGATCACCTATTTCAAG ACTGGACGAACGGAACAGGTGACATTTATAACCACTTCGTCTTAGCCTTTATGATCGAGAGTTTCCAAACATTATGGAAC GCTCTGGCGACCCCAGAAGGGAAAAATGGCTTCCATTTTAGCTCGAACAACTGTATTGATATTCTCAGCATCAACAAATG CTCAATTGGTGCAATTCTCGCCTATGGCTTAGGTCCCCAACGCTTTGCCCAACTTCCAGGCTTTATGGGAAACATGTTTT TAACCCATGATGAGATACCTGAAAGCATCCAGACCATCAATCGAACGTTTGAGACGCTTGATCTGCCAACCTTATCTCAA CGGCTGCAACAACTCTGCCTGAGTGACTATCCATAA
Upstream 100 bases:
>100_bases AAGTCAAATTCTGTACTTTTTGCAGAGCAACACCCTTAAGAGCTGTGGTAGAACGGACTTCTTTAGGCAGAGCACCCCAA TATTCTAAAAATTCATCCCT
Downstream 100 bases:
>100_bases AGCCAAGCCCTAGACATATTCCAAGTTTTACCCAGGGAATTACAGCGAGCACAGGAATCGCACAGAGGTTTTATGGCAAT TGGCATGCTGATGTCTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSTDYSWLICHPSERDEQILQPLFEEAVKSATLPTQSKSVLQKWQQNPDHLFQDWTNGTGDIYNHFVLAFMIESFQTLWN ALATPEGKNGFHFSSNNCIDILSINKCSIGAILAYGLGPQRFAQLPGFMGNMFLTHDEIPESIQTINRTFETLDLPTLSQ RLQQLCLSDYP
Sequences:
>Translated_171_residues MSTDYSWLICHPSERDEQILQPLFEEAVKSATLPTQSKSVLQKWQQNPDHLFQDWTNGTGDIYNHFVLAFMIESFQTLWN ALATPEGKNGFHFSSNNCIDILSINKCSIGAILAYGLGPQRFAQLPGFMGNMFLTHDEIPESIQTINRTFETLDLPTLSQ RLQQLCLSDYP >Mature_170_residues STDYSWLICHPSERDEQILQPLFEEAVKSATLPTQSKSVLQKWQQNPDHLFQDWTNGTGDIYNHFVLAFMIESFQTLWNA LATPEGKNGFHFSSNNCIDILSINKCSIGAILAYGLGPQRFAQLPGFMGNMFLTHDEIPESIQTINRTFETLDLPTLSQR LQQLCLSDYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19460; Mature: 19329
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDYSWLICHPSERDEQILQPLFEEAVKSATLPTQSKSVLQKWQQNPDHLFQDWTNGTG CCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCH DIYNHFVLAFMIESFQTLWNALATPEGKNGFHFSSNNCIDILSINKCSIGAILAYGLGPQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHHCCCHH RFAQLPGFMGNMFLTHDEIPESIQTINRTFETLDLPTLSQRLQQLCLSDYP HHHHCCCHHHCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure STDYSWLICHPSERDEQILQPLFEEAVKSATLPTQSKSVLQKWQQNPDHLFQDWTNGTG CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCH DIYNHFVLAFMIESFQTLWNALATPEGKNGFHFSSNNCIDILSINKCSIGAILAYGLGPQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHHCCCHH RFAQLPGFMGNMFLTHDEIPESIQTINRTFETLDLPTLSQRLQQLCLSDYP HHHHCCCHHHCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA