| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158336243
Identifier: 158336243
GI number: 158336243
Start: 3135157
End: 3135672
Strand: Direct
Name: 158336243
Synonym: AM1_3105
Alternate gene names: NA
Gene position: 3135157-3135672 (Clockwise)
Preceding gene: 158336238
Following gene: 158336245
Centisome position: 48.21
GC content: 48.45
Gene sequence:
>516_bases ATGACAATAGCAGTGAGCTATCAAGAGCGGTTCCTGAGTTGTTTGGAACCAGGAGATGATCCTGAGTTTTGGAAGATTGC GATCTCAACCCTATTTCAAGACGTGGTAGCAGAGTTAGACGCTTGTCCGACCAAGAGACCCGTTTATGCTCAGCTAGGTG CTTGTTCTCATTGGTTGCGGCCTCACCAAACCCGCTGGAAAGCTGCTGGAGGATTTGCTTGGCCAACCGGTTATGGAGGC AGCGGATTCTCAAGGTTAGGGCTACCAGAGTTTGATTGGTCTATTTTGATGGTTTGGGATGTCGGTCAGCGAACTTGGCT TCCCGTAGACAAATTTCACGAAAAGCGGAGATTTCTATTCAGGGCTGCTCTGCCTACTCGGACCAAAAGACACTTACAAG CTGCAGCGCATACCGTATGGGTGCCGGGTAAACCCTCTCAAGCAGATCAAAAATCTACGATGTTCTATGGTTTTCGAAAA GTGAATGAACAATGGACCTGCGTGACTCATGACTAG
Upstream 100 bases:
>100_bases GTCGAACCAAAGTCTGGTTTCAATTCTGTGGAGTTTGACGTTGATGCTGTTGGGTGGATATGCCAGATTGCAGACAGAGT ATTCTTGATTTTTAGAATTC
Downstream 100 bases:
>100_bases TATCTTTGGCGAGCACTAAAGGTCATCTTCGTACCAAGTGACAGCTTTAATTTTCATGATCTTGAAGAAGCAATCTGGGA GTGTGGTCAGTGAGTTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTIAVSYQERFLSCLEPGDDPEFWKIAISTLFQDVVAELDACPTKRPVYAQLGACSHWLRPHQTRWKAAGGFAWPTGYGG SGFSRLGLPEFDWSILMVWDVGQRTWLPVDKFHEKRRFLFRAALPTRTKRHLQAAAHTVWVPGKPSQADQKSTMFYGFRK VNEQWTCVTHD
Sequences:
>Translated_171_residues MTIAVSYQERFLSCLEPGDDPEFWKIAISTLFQDVVAELDACPTKRPVYAQLGACSHWLRPHQTRWKAAGGFAWPTGYGG SGFSRLGLPEFDWSILMVWDVGQRTWLPVDKFHEKRRFLFRAALPTRTKRHLQAAAHTVWVPGKPSQADQKSTMFYGFRK VNEQWTCVTHD >Mature_170_residues TIAVSYQERFLSCLEPGDDPEFWKIAISTLFQDVVAELDACPTKRPVYAQLGACSHWLRPHQTRWKAAGGFAWPTGYGGS GFSRLGLPEFDWSILMVWDVGQRTWLPVDKFHEKRRFLFRAALPTRTKRHLQAAAHTVWVPGKPSQADQKSTMFYGFRKV NEQWTCVTHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19660; Mature: 19528
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAVSYQERFLSCLEPGDDPEFWKIAISTLFQDVVAELDACPTKRPVYAQLGACSHWLR CEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC PHQTRWKAAGGFAWPTGYGGSGFSRLGLPEFDWSILMVWDVGQRTWLPVDKFHEKRRFLF CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH RAALPTRTKRHLQAAAHTVWVPGKPSQADQKSTMFYGFRKVNEQWTCVTHD HHHCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure TIAVSYQERFLSCLEPGDDPEFWKIAISTLFQDVVAELDACPTKRPVYAQLGACSHWLR EEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC PHQTRWKAAGGFAWPTGYGGSGFSRLGLPEFDWSILMVWDVGQRTWLPVDKFHEKRRFLF CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH RAALPTRTKRHLQAAAHTVWVPGKPSQADQKSTMFYGFRKVNEQWTCVTHD HHHCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA