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The map label for this gene is hli [H]

Identifier: 158336225

GI number: 158336225

Start: 3118474

End: 3119112

Strand: Reverse

Name: hli [H]

Synonym: AM1_3087

Alternate gene names: 158336225

Gene position: 3119112-3118474 (Counterclockwise)

Preceding gene: 158336228

Following gene: 158336224

Centisome position: 47.96

GC content: 44.29

Gene sequence:

>639_bases
ATGAAGCTTGTTATTCACGGCAAGAATATTGAGATCACCGATGCCATTCGTGAATATGTCCACCAAAAGATAGAGAAGGC
TGCCAATCATTATCAGAATTTAACGACCGAAATCGATGTGCATCTATCGGTTGCTCGTAATCCTAGAATAACGACGAAAC
AAACCGCGGAAGTAACCCTATTTGTAAATGGTTCTGTCATTCGAGCAGAAGAAAGTTCAGAAAACCTATATGCCAGCATT
GACCTGGTCGCCGATAAAATTGCTCGCCAGCTCCGTAAGTACAAAGAGAAGCGGCAAACAAAAGGGCCTAATAAAGGCTC
TAATCGATCGAAAGCTGTTGCTCTTCAAACTCCAGAAGAGCAGCCACTTATTGGGGATCTAACGAGGGATCGTGCCCCTG
AATTGCCCGAGGAAGTGGTTCGGTGTAAGTACTTTGCTATTTCCCCCATGTCCGTTCATGATGCCCTTGAGCAATTAGAT
CTGGTTGACCATGATTTTTATGTGTTTGAAAATGCTGACACGGGTCAACTAAATGTGATTTACGAGCGCAATCATGGAGG
GTATGGGGTGATTCAGCCTCGCCAAGGTAATCCCATTAGCAATGGTCACGTGAAACAAGCTGATTTTCAAACTGCATAG

Upstream 100 bases:

>100_bases
GGGATGCAAAGCAAGTTGAAGACACGGTAGAACAGCCCCCCCTTGCAGAAAACAAAGTGTTAGGGTGAGGTTAACACTGA
CCATTAGGGGAGGCAACCCT

Downstream 100 bases:

>100_bases
CTTTTTCTCAGCCTAACGATATAAACCCCTGCTTTGTCAGGGGTTTAATGCTATGTATGGACTATCTTTATGGTTGATAT
AGGGAGGCCAATTTCGGCAA

Product: high light inducible protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSVARNPRITTKQTAEVTLFVNGSVIRAEESSENLYASI
DLVADKIARQLRKYKEKRQTKGPNKGSNRSKAVALQTPEEQPLIGDLTRDRAPELPEEVVRCKYFAISPMSVHDALEQLD
LVDHDFYVFENADTGQLNVIYERNHGGYGVIQPRQGNPISNGHVKQADFQTA

Sequences:

>Translated_212_residues
MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSVARNPRITTKQTAEVTLFVNGSVIRAEESSENLYASI
DLVADKIARQLRKYKEKRQTKGPNKGSNRSKAVALQTPEEQPLIGDLTRDRAPELPEEVVRCKYFAISPMSVHDALEQLD
LVDHDFYVFENADTGQLNVIYERNHGGYGVIQPRQGNPISNGHVKQADFQTA
>Mature_212_residues
MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSVARNPRITTKQTAEVTLFVNGSVIRAEESSENLYASI
DLVADKIARQLRKYKEKRQTKGPNKGSNRSKAVALQTPEEQPLIGDLTRDRAPELPEEVVRCKYFAISPMSVHDALEQLD
LVDHDFYVFENADTGQLNVIYERNHGGYGVIQPRQGNPISNGHVKQADFQTA

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=97, Percent_Identity=39.1752577319588, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 23946; Mature: 23946

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSVARNPRITTKQTAEVTL
CEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEE
FVNGSVIRAEESSENLYASIDLVADKIARQLRKYKEKRQTKGPNKGSNRSKAVALQTPEE
EECCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
QPLIGDLTRDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFENADTGQLNVI
CCCCCCCHHCCCCCCHHHHHHEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEE
YERNHGGYGVIQPRQGNPISNGHVKQADFQTA
EEECCCCEEEEECCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSVARNPRITTKQTAEVTL
CEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEE
FVNGSVIRAEESSENLYASIDLVADKIARQLRKYKEKRQTKGPNKGSNRSKAVALQTPEE
EECCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
QPLIGDLTRDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFENADTGQLNVI
CCCCCCCHHCCCCCCHHHHHHEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEE
YERNHGGYGVIQPRQGNPISNGHVKQADFQTA
EEECCCCEEEEECCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]