| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336173
Identifier: 158336173
GI number: 158336173
Start: 3059421
End: 3060098
Strand: Direct
Name: 158336173
Synonym: AM1_3035
Alternate gene names: NA
Gene position: 3059421-3060098 (Clockwise)
Preceding gene: 158336171
Following gene: 158336174
Centisome position: 47.04
GC content: 51.47
Gene sequence:
>678_bases ATGCCTGCCCCACAAAAGCACGTCATTGGCTTGGTCTTTTATCCTGGCATGACCTCACTAGACATGGTGGGCCCCCATCA AGTTTTCGGTGCACTACCCGGTGTCGAACTGCATCGGATTTGGAAAACGCTAGCTCCAATTACCTGCGATGACGGCTTAG TGATCGTGCCAGATACCACATTTTCAACTTGTCCACCTTTGGATGTTATTTGTGTCGGCGGCGGTTTAGAACAGCGGGCA GTCGTAGATGATCCAGAAGTGCTGGACTTTTTCCATAAACAAGGCAAAACGGCGCGGTTTATTACCTCTGTCTGTAGTGG GGCAGAGTTTCTAGCAAAAGCAGGGTTGCTAGAGGGCTATCGAGCAGCGACCCATTGGGGCATGCGCGAACAACTAATGA CAAATCAGGGCGTTGAGATTGTAAACGAGCGTGTTGTTGTCGATCGCAATCGCATCACAGGGGGAGGCGTGACGGCCGGG ATAGATTTTGGTCTAACGGTTGCAAGTATCCTGTGCGGCGAAGAAACCGCCAAGATGATTCAACTCTTACTGGAGTACGA TCCTGCGCCTCCATTTGATGCAGGTTCACCTGAGAAAGCGGGGCCTGAGCTGGTCGAGAAAGCCATCGCACTGATGCAGC AGATGTCAAGCTTAGAATTTGCAAACCCCGTTCGCTGA
Upstream 100 bases:
>100_bases TGGTCGTGAAAAGAGTACCCGATCGAGGACTAGGCGCACTGGGCCGTTATTCATAGCATAGGGATAGATTCAACAACGAT CAAAATAAGGAAATTAATTC
Downstream 100 bases:
>100_bases TCTGACGACAATCCCCTCTTCATCCACGTTATAGCTTCGTTAGTTTATGAGCTTCTTTAAAGACTTAGTTCAGTTTTGGA ACGCCATGGGTTCGCTGCCC
Product: DJ-1/PfpI superfamily protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; DJ-1/PfpI Family Protein; ThiJ/PfpI; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; AraC Family Transcription Regulator; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; Transcriptional Regulatory Protein; AraC-Family Transcriptional Regulator; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MPAPQKHVIGLVFYPGMTSLDMVGPHQVFGALPGVELHRIWKTLAPITCDDGLVIVPDTTFSTCPPLDVICVGGGLEQRA VVDDPEVLDFFHKQGKTARFITSVCSGAEFLAKAGLLEGYRAATHWGMREQLMTNQGVEIVNERVVVDRNRITGGGVTAG IDFGLTVASILCGEETAKMIQLLLEYDPAPPFDAGSPEKAGPELVEKAIALMQQMSSLEFANPVR
Sequences:
>Translated_225_residues MPAPQKHVIGLVFYPGMTSLDMVGPHQVFGALPGVELHRIWKTLAPITCDDGLVIVPDTTFSTCPPLDVICVGGGLEQRA VVDDPEVLDFFHKQGKTARFITSVCSGAEFLAKAGLLEGYRAATHWGMREQLMTNQGVEIVNERVVVDRNRITGGGVTAG IDFGLTVASILCGEETAKMIQLLLEYDPAPPFDAGSPEKAGPELVEKAIALMQQMSSLEFANPVR >Mature_224_residues PAPQKHVIGLVFYPGMTSLDMVGPHQVFGALPGVELHRIWKTLAPITCDDGLVIVPDTTFSTCPPLDVICVGGGLEQRAV VDDPEVLDFFHKQGKTARFITSVCSGAEFLAKAGLLEGYRAATHWGMREQLMTNQGVEIVNERVVVDRNRITGGGVTAGI DFGLTVASILCGEETAKMIQLLLEYDPAPPFDAGSPEKAGPELVEKAIALMQQMSSLEFANPVR
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24205; Mature: 24074
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPQKHVIGLVFYPGMTSLDMVGPHQVFGALPGVELHRIWKTLAPITCDDGLVIVPDTT CCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCC FSTCPPLDVICVGGGLEQRAVVDDPEVLDFFHKQGKTARFITSVCSGAEFLAKAGLLEGY CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHH RAATHWGMREQLMTNQGVEIVNERVVVDRNRITGGGVTAGIDFGLTVASILCGEETAKMI HHHHHCCHHHHHHHCCCHHHHHCEEEEECCCCCCCCEEECHHHHHHHHHHHHCHHHHHHH QLLLEYDPAPPFDAGSPEKAGPELVEKAIALMQQMSSLEFANPVR HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PAPQKHVIGLVFYPGMTSLDMVGPHQVFGALPGVELHRIWKTLAPITCDDGLVIVPDTT CCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCC FSTCPPLDVICVGGGLEQRAVVDDPEVLDFFHKQGKTARFITSVCSGAEFLAKAGLLEGY CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHH RAATHWGMREQLMTNQGVEIVNERVVVDRNRITGGGVTAGIDFGLTVASILCGEETAKMI HHHHHCCHHHHHHHCCCHHHHHCEEEEECCCCCCCCEEECHHHHHHHHHHHHCHHHHHHH QLLLEYDPAPPFDAGSPEKAGPELVEKAIALMQQMSSLEFANPVR HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA