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The map label for this gene is ompA

Identifier: 158336137

GI number: 158336137

Start: 3027620

End: 3029374

Strand: Reverse

Name: ompA

Synonym: AM1_2999

Alternate gene names: NA

Gene position: 3029374-3027620 (Counterclockwise)

Preceding gene: 158336138

Following gene: 158336136

Centisome position: 46.58

GC content: 45.41

Gene sequence:

>1755_bases
ATGAGTAATTTACCTACTAATGCCAATCGGGATGCTGCTTATCCAGAAGAACCTGGTCAAGCTAACGAATTGAATGAGCT
GCGAAGTTTGCTAATTGGGCCAGATCTGAAAGGACGATTCGAGAATGCCCAGTTGAGATCGGAAGACGTAAGTCGGGTTT
TACCCGAAGCGATCCAACTCACCCTCAAAACGAGTGATGAGACTGTATCTGAAGCTGTGATGCCAACGGTGGAGCATGCG
ATTAAATCGTCTGTGAATACCGATCAAAATATTCTCTCTGAAGCCCTGTTCCCGATTATGGGACCAGCGATACGGAAAGC
TATCGCAGCGGCCATCCAGAATTTAACCGATTCCCTGAACCAGAGTCTAGAACATAGCCTCTCTCCTCAAAGTCTCAGTT
GGCGCTTTGAAGCCTGGCGTACAGGGAAATCTTTTGCTGAAGTTTTGTTGTTGCGTACCCTTGTCTATCAGGTCGAACAA
GTTTTTCTCATCCATAAATCCTCAGGCTTAGTTCTCCAGCATCTTGCTGCCGCAACGGCTGCTGCTCAGGATGCAGATTT
AGTCTCTGCTATGTTTACCGCGATTCAAGATTTTGTTCGCGACTCATTTAGTGTGAGTGACGAAGCCTTAGGGAGTTTGC
AAGTCGGAGAGTTAACCATTTGGGTGAATGAAGGCCCTCAAGCCATTATTGCTTGTGTTATTCGGGGTAACCCACCTGGC
AAACTGCGGCAAATGATGGAAAATGCTCTGGAGCGAATTCACCTGGTCCAAGAGCGTCAGCTTCACGAGTTTCAGGGGGA
TAGCAGTGCCTTTGAACCGAGCCAGCCTTATCTAGAAGAATGTTTACAGTCCCAATATCAAACGAAAAAGAAGCGCTCTT
CTCCGTTGAAATGGATTGGCGGAGCAGCTGGAATTCTCATTTTAGGATTAGGGGTCTGGGGCTTTTTGTCTAACTATGAG
CGAAACCAAGTTCAAAGCTTTGTCGATCAACTGAATCGAGAATCCGGTATCGTCGTCTTGCAAACCAAAAAACAGGACGG
TAAATATGTGATCTCTGGCCTAAAAGATCCCCTGGCGTCTAAGCCCACTGATTTGATATCAAAGACAGATCTAGATCCAA
ACAAGGTTGCTTTTAGTTGGGAACCTTATCTATCCTTCGATACTGAATTTATTGAATCCAGAGTGATATCGCTGTTGCAG
CCCCCAGAAACAGTTGAGCTGAAAGTTGATGCTAATGGGGCGATTCAAGCCTCAGGGACTGCCCCGCAATCTTGGATCAC
GGAAGCAAAACAGCTAGCCTTGCGATTGCCTAATGTGACCCAATTCAACACTCAACAAATTGTGCCTGTCGAAGCAGGTG
CTCTTGCAGACATTAAGGCCAAACTTGAGGCTCACACCATCTTCTTTACCCAAAATGCTCAGTTGGTCCCTCAACAAGAT
GTCAAGCTTAAAACCGTGGCTGAAGACATTAAAAAACTGGCTAAAACAGCTAAAACCATCAACCAAACCGTTGCTGTTCT
CGTTGAAGGGCATACCGATACTAGTGGATCTGAGTTGATCAATCTCTATGTCCGGGAAACTCGTGCTAAGGCGATTATTT
CCCTGCTATCCAAGCAGGGCATTGATAAAAACCTTTTTCAGGCAGTGAGTGTTGAGCCTCCTGCAGTAGAAAAGTTAGAT
TCAGCTAAAATCTCTAAATCCAATCGTAAGGTTACTTTTAAAGTTATTTTTGTTCAACCATCGGACGCTGATTGA

Upstream 100 bases:

>100_bases
TGTTTATCGTTGTGGCCTTTACTATAGCAATATCAATAATGATGGCAGATCTGATGCGCATGCTCTGTCAGCCCATCTAG
TCTTTGCAGTTCTATAGTCA

Downstream 100 bases:

>100_bases
TAGCTTATGCTCCAGAAAAAGATTTGTATGATCGGTGCATTTGCGACTGGGAAAACGAGCCTTGTCGCTCGATATGTTCA
GGGTATTTATTCTGATAAAT

Product: outer membrane protein A

Products: NA

Alternate protein names: OmpA/MotB Domain-Containing Protein; Outer Membrane Protein A

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSNLPTNANRDAAYPEEPGQANELNELRSLLIGPDLKGRFENAQLRSEDVSRVLPEAIQLTLKTSDETVSEAVMPTVEHA
IKSSVNTDQNILSEALFPIMGPAIRKAIAAAIQNLTDSLNQSLEHSLSPQSLSWRFEAWRTGKSFAEVLLLRTLVYQVEQ
VFLIHKSSGLVLQHLAAATAAAQDADLVSAMFTAIQDFVRDSFSVSDEALGSLQVGELTIWVNEGPQAIIACVIRGNPPG
KLRQMMENALERIHLVQERQLHEFQGDSSAFEPSQPYLEECLQSQYQTKKKRSSPLKWIGGAAGILILGLGVWGFLSNYE
RNQVQSFVDQLNRESGIVVLQTKKQDGKYVISGLKDPLASKPTDLISKTDLDPNKVAFSWEPYLSFDTEFIESRVISLLQ
PPETVELKVDANGAIQASGTAPQSWITEAKQLALRLPNVTQFNTQQIVPVEAGALADIKAKLEAHTIFFTQNAQLVPQQD
VKLKTVAEDIKKLAKTAKTINQTVAVLVEGHTDTSGSELINLYVRETRAKAIISLLSKQGIDKNLFQAVSVEPPAVEKLD
SAKISKSNRKVTFKVIFVQPSDAD

Sequences:

>Translated_584_residues
MSNLPTNANRDAAYPEEPGQANELNELRSLLIGPDLKGRFENAQLRSEDVSRVLPEAIQLTLKTSDETVSEAVMPTVEHA
IKSSVNTDQNILSEALFPIMGPAIRKAIAAAIQNLTDSLNQSLEHSLSPQSLSWRFEAWRTGKSFAEVLLLRTLVYQVEQ
VFLIHKSSGLVLQHLAAATAAAQDADLVSAMFTAIQDFVRDSFSVSDEALGSLQVGELTIWVNEGPQAIIACVIRGNPPG
KLRQMMENALERIHLVQERQLHEFQGDSSAFEPSQPYLEECLQSQYQTKKKRSSPLKWIGGAAGILILGLGVWGFLSNYE
RNQVQSFVDQLNRESGIVVLQTKKQDGKYVISGLKDPLASKPTDLISKTDLDPNKVAFSWEPYLSFDTEFIESRVISLLQ
PPETVELKVDANGAIQASGTAPQSWITEAKQLALRLPNVTQFNTQQIVPVEAGALADIKAKLEAHTIFFTQNAQLVPQQD
VKLKTVAEDIKKLAKTAKTINQTVAVLVEGHTDTSGSELINLYVRETRAKAIISLLSKQGIDKNLFQAVSVEPPAVEKLD
SAKISKSNRKVTFKVIFVQPSDAD
>Mature_583_residues
SNLPTNANRDAAYPEEPGQANELNELRSLLIGPDLKGRFENAQLRSEDVSRVLPEAIQLTLKTSDETVSEAVMPTVEHAI
KSSVNTDQNILSEALFPIMGPAIRKAIAAAIQNLTDSLNQSLEHSLSPQSLSWRFEAWRTGKSFAEVLLLRTLVYQVEQV
FLIHKSSGLVLQHLAAATAAAQDADLVSAMFTAIQDFVRDSFSVSDEALGSLQVGELTIWVNEGPQAIIACVIRGNPPGK
LRQMMENALERIHLVQERQLHEFQGDSSAFEPSQPYLEECLQSQYQTKKKRSSPLKWIGGAAGILILGLGVWGFLSNYER
NQVQSFVDQLNRESGIVVLQTKKQDGKYVISGLKDPLASKPTDLISKTDLDPNKVAFSWEPYLSFDTEFIESRVISLLQP
PETVELKVDANGAIQASGTAPQSWITEAKQLALRLPNVTQFNTQQIVPVEAGALADIKAKLEAHTIFFTQNAQLVPQQDV
KLKTVAEDIKKLAKTAKTINQTVAVLVEGHTDTSGSELINLYVRETRAKAIISLLSKQGIDKNLFQAVSVEPPAVEKLDS
AKISKSNRKVTFKVIFVQPSDAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:
GO:0009279: Outer membrane protein A, putative
GO:0005886: Outer membrane protein A, putative
GO:0016020: Outer membrane protein A, putative
GO:0016021: Outer membrane protein A, putative

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64230; Mature: 64099

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLPTNANRDAAYPEEPGQANELNELRSLLIGPDLKGRFENAQLRSEDVSRVLPEAIQL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEE
TLKTSDETVSEAVMPTVEHAIKSSVNTDQNILSEALFPIMGPAIRKAIAAAIQNLTDSLN
EEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
QSLEHSLSPQSLSWRFEAWRTGKSFAEVLLLRTLVYQVEQVFLIHKSSGLVLQHLAAATA
HHHHHCCCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH
AAQDADLVSAMFTAIQDFVRDSFSVSDEALGSLQVGELTIWVNEGPQAIIACVIRGNPPG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEEEEECCCCCEEEEEEECCCCCH
KLRQMMENALERIHLVQERQLHEFQGDSSAFEPSQPYLEECLQSQYQTKKKRSSPLKWIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHC
GAAGILILGLGVWGFLSNYERNQVQSFVDQLNRESGIVVLQTKKQDGKYVISGLKDPLAS
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHCCCCCC
KPTDLISKTDLDPNKVAFSWEPYLSFDTEFIESRVISLLQPPETVELKVDANGAIQASGT
CCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCC
APQSWITEAKQLALRLPNVTQFNTQQIVPVEAGALADIKAKLEAHTIFFTQNAQLVPQQD
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHEEEEEEEECCCCCCCCCC
VKLKTVAEDIKKLAKTAKTINQTVAVLVEGHTDTSGSELINLYVRETRAKAIISLLSKQG
CHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
IDKNLFQAVSVEPPAVEKLDSAKISKSNRKVTFKVIFVQPSDAD
CCHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure 
SNLPTNANRDAAYPEEPGQANELNELRSLLIGPDLKGRFENAQLRSEDVSRVLPEAIQL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEE
TLKTSDETVSEAVMPTVEHAIKSSVNTDQNILSEALFPIMGPAIRKAIAAAIQNLTDSLN
EEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
QSLEHSLSPQSLSWRFEAWRTGKSFAEVLLLRTLVYQVEQVFLIHKSSGLVLQHLAAATA
HHHHHCCCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH
AAQDADLVSAMFTAIQDFVRDSFSVSDEALGSLQVGELTIWVNEGPQAIIACVIRGNPPG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEEEEECCCCCEEEEEEECCCCCH
KLRQMMENALERIHLVQERQLHEFQGDSSAFEPSQPYLEECLQSQYQTKKKRSSPLKWIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHC
GAAGILILGLGVWGFLSNYERNQVQSFVDQLNRESGIVVLQTKKQDGKYVISGLKDPLAS
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHCCCCCC
KPTDLISKTDLDPNKVAFSWEPYLSFDTEFIESRVISLLQPPETVELKVDANGAIQASGT
CCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCC
APQSWITEAKQLALRLPNVTQFNTQQIVPVEAGALADIKAKLEAHTIFFTQNAQLVPQQD
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHEEEEEEEECCCCCCCCCC
VKLKTVAEDIKKLAKTAKTINQTVAVLVEGHTDTSGSELINLYVRETRAKAIISLLSKQG
CHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
IDKNLFQAVSVEPPAVEKLDSAKISKSNRKVTFKVIFVQPSDAD
CCHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA