Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

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The map label for this gene is hspA [H]

Identifier: 158336131

GI number: 158336131

Start: 3022842

End: 3023276

Strand: Reverse

Name: hspA [H]

Synonym: AM1_2993

Alternate gene names: 158336131

Gene position: 3023276-3022842 (Counterclockwise)

Preceding gene: 158336133

Following gene: 158336121

Centisome position: 46.49

GC content: 48.97

Gene sequence:

>435_bases
ATGGCATTAGTTCACTGGCAACCCTTCCGCGAATTAGAAGAGATGCAGCGGGATGTGAATCGTCTCGTTGATCGTCTTTC
AATGACTCGCCAGTCTGGTGTTGGATTTGTTCCTGCGGTGGAATTAGAGGATACTGCTGCACAGTATTGCTTACGCTTAG
AACTCCCGGGCCTGAAGCCTGAAGATGTCAATATCGAAGTCACAGAAAATTCTGTATCTATTAGTGGTGAGCGTCGTTCC
GAGACCCATAGTGAAGATCAGGGAGTGACTCGCAGCGAGTTTCACTACGGGACATTTCAACGGGTGATTCCGCTACCGGG
GCGCATCAATCCTCAAGAGGTCCAGGCCGATTACCAGCAAGGCGTGTTAACCGTTACCCTTCCCAAAGTGGAAGAAGAAA
AACATAACGTCGTCAAAGTTCAGGTTAACTCGTAG

Upstream 100 bases:

>100_bases
TAGGATCGTAAAGTCTTACAGTATTCTCAAAAGTTAAGAGCAATAAAGGTTTGAAGAGCCTTTTCCCAGTTCATCCTGTA
TAAACTAGGAGGTTATTGTT

Downstream 100 bases:

>100_bases
GTTGTGAGCGCTGGTGTCCAATGATGCCAGTGCTATAGCCTTTCCACTTCTTCCACTGAGACAATTTTCCATTGGCCGTT
GACCCGCTCCCAGGACGTTG

Product: heat shock protein (HSP20) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MALVHWQPFRELEEMQRDVNRLVDRLSMTRQSGVGFVPAVELEDTAAQYCLRLELPGLKPEDVNIEVTENSVSISGERRS
ETHSEDQGVTRSEFHYGTFQRVIPLPGRINPQEVQADYQQGVLTVTLPKVEEEKHNVVKVQVNS

Sequences:

>Translated_144_residues
MALVHWQPFRELEEMQRDVNRLVDRLSMTRQSGVGFVPAVELEDTAAQYCLRLELPGLKPEDVNIEVTENSVSISGERRS
ETHSEDQGVTRSEFHYGTFQRVIPLPGRINPQEVQADYQQGVLTVTLPKVEEEKHNVVKVQVNS
>Mature_143_residues
ALVHWQPFRELEEMQRDVNRLVDRLSMTRQSGVGFVPAVELEDTAAQYCLRLELPGLKPEDVNIEVTENSVSISGERRSE
THSEDQGVTRSEFHYGTFQRVIPLPGRINPQEVQADYQQGVLTVTLPKVEEEKHNVVKVQVNS

Specific function: May stabilize cellular components during stress and spore formation [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16414; Mature: 16282

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVHWQPFRELEEMQRDVNRLVDRLSMTRQSGVGFVPAVELEDTAAQYCLRLELPGLKP
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHEEEEEECCCCCC
EDVNIEVTENSVSISGERRSETHSEDQGVTRSEFHYGTFQRVIPLPGRINPQEVQADYQQ
CCCEEEEECCEEEECCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHHC
GVLTVTLPKVEEEKHNVVKVQVNS
CEEEEEECCCCCCCCCEEEEEECC
>Mature Secondary Structure 
ALVHWQPFRELEEMQRDVNRLVDRLSMTRQSGVGFVPAVELEDTAAQYCLRLELPGLKP
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHEEEEEECCCCCC
EDVNIEVTENSVSISGERRSETHSEDQGVTRSEFHYGTFQRVIPLPGRINPQEVQADYQQ
CCCEEEEECCEEEECCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHHC
GVLTVTLPKVEEEKHNVVKVQVNS
CEEEEEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226695; 8423161 [H]