| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336106
Identifier: 158336106
GI number: 158336106
Start: 2997293
End: 2999053
Strand: Reverse
Name: 158336106
Synonym: AM1_2968
Alternate gene names: NA
Gene position: 2999053-2997293 (Counterclockwise)
Preceding gene: 158336107
Following gene: 158336105
Centisome position: 46.11
GC content: 50.71
Gene sequence:
>1761_bases GTGGGCTCTAAAGTCATCAATTTGCTGAGCTGGTTTAGTGTGGCCTTAATGGTTGCAGGCTTCTCTGCTGGGTTTGTTTC TGGTCAGTGGTTTTCGCTACCCCTGGGGGTGATGTTGAGTGGGGTGGTGCTGTTGGGCATCTCTTTAATGTGGCGATGGC AAAGACTATCGCCCTCCAATCAATGGTGGCAGTGGCGATCCACCCAATCCGGTACCAATGCCTTGGTGGCAACCCTGGCG GTGTTGGTGATTTTGGGCTTGGTGAACTTTATCGTTGTGCGTTATCCCTATCGCGCAGATTTTACAGAACAGAAAACCTA CTCCCTCGCGCCCCAAACCCTGAATGTGTTGTCCGCACTCCCTAAACCTGTGGAAGTGTTGGTCTTTATCGGTAATGATC CGTCTGCTTCTGATTCTCAAAGCCAGATTGTGTTGCAGAATCAGTTACTGCTGAAGGAATACCAACGACAGCAGCCCGAT AAATTCAAATTCCGGTTTATCGATCCCCAGGCGGAACCCGGCTTAGCCCGCAAGCATAATATTCGAAATTTGGGTGATAT TAGCTTGGTGTATGACCAGCGTATGAAGTTGCTGTCTTCGGGACTGTCAGAGGTCACGTTAACCCCTGCGATCGCATTGT TAACGAATGAACGAAAAGCTACAGCTTACGTGATTCAGGGGCATAATGAAGTGCCTTTATCGGGGTTTACAGAGAGCTTG GCAGGTGCAATCAATCAACTGAAGATGGAAGGAATTACCGTTGAACCCCTAAATCTATCCCTCCAGCAACAAATTCCTGA TGATGCAGATGTGTTGGTGATTGCGGGGCCGAAGTTACCGTTGCTAGAAGCCGAAGTGACCTTAATTCGGGATTTTCTCA AAGAGGGTGGCAATTTATTCTTGATGCTGGATCCCGAGGTGGATGTCGGCTTAAAGCCTATTCTCGAAGTCATGGGTGCC ACATTAGATGGTCGGCTAATTGTTGATCCCAAACATGCCCGCTTGGCTTGGCCCGCTGCCTTGACCTATGGTGAACATCC CATTACGGAGAGCTTTAGTCAAAAGTTGTCTTTCTTTCCCTTTGCCCAAGCCGTGGATGTGCAAGAACAGCCCGGTCAAC TAGTGACGCCTCTCTTACAAACAAGTGAAGCGTCATGGGCGGAGACGGATCTGACGGGCCAGCAAATTCAGCTGGACCAA GGACGCGATCGCAAAGGTCCATTAACCATTGGGGTTGCGATTAAACGCTCTATCTCTGCTCCCCCTGCCAAAACGAAACC TGCGCCGCAACACTCCGCTTCTCCGTCCCCTTCTAGTTCATCACCAACCCCGACAGCCTCTCCAGCGACTGAGTCAGCGC CTAGTTCTAGCGCAACGCCTAATACGGAGGCGGCTCCTAGCCCTTCCTTGGCTCCTACGCCTCCCCTATCCACGGAATCG GTATCCCCCCCGACGGCGGAATCTCTCCAACCTGAAATTAAAGGGGAGGCTGCTCGGGTGGTGATTATTGGCGACTCTGA TTTTGCCAAAGATGACCCCTACTTTGAGCAGACGGTGAATCGCGATATTTTCGTCAATTCAGTGTCTTGGCTGATTATGG ATGGCGATGATCCGACCCTGTCTATTCGCCCTAAGCGAGTGATTCAAAGAACCCTAGCCATTTCCGACCAAATGAATATG CTGCTGAGCGTGTTTGGGATTGTGCTATTGCCGTTAACTGCGTTTGCAACGGCAGCTGCTCTATGGTGGCAACGACGATA A
Upstream 100 bases:
>100_bases TTCTCACGGCCCAGTCCATTGATTTATTACGGTTCCAGCGACGCTAGGGTGCGATACATGGGGGTTGAAGTTTCAGAATG GAAGTGCAGACGTGACAAGG
Downstream 100 bases:
>100_bases AAAAGAAGAGGAAAACGAACTAATTTTGACTGTAAATAAAGGGATGAAGCTTAAATCTACAACGATGATCTTGCTCTGTA CGGCTATCGTCGGTGGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MGSKVINLLSWFSVALMVAGFSAGFVSGQWFSLPLGVMLSGVVLLGISLMWRWQRLSPSNQWWQWRSTQSGTNALVATLA VLVILGLVNFIVVRYPYRADFTEQKTYSLAPQTLNVLSALPKPVEVLVFIGNDPSASDSQSQIVLQNQLLLKEYQRQQPD KFKFRFIDPQAEPGLARKHNIRNLGDISLVYDQRMKLLSSGLSEVTLTPAIALLTNERKATAYVIQGHNEVPLSGFTESL AGAINQLKMEGITVEPLNLSLQQQIPDDADVLVIAGPKLPLLEAEVTLIRDFLKEGGNLFLMLDPEVDVGLKPILEVMGA TLDGRLIVDPKHARLAWPAALTYGEHPITESFSQKLSFFPFAQAVDVQEQPGQLVTPLLQTSEASWAETDLTGQQIQLDQ GRDRKGPLTIGVAIKRSISAPPAKTKPAPQHSASPSPSSSSPTPTASPATESAPSSSATPNTEAAPSPSLAPTPPLSTES VSPPTAESLQPEIKGEAARVVIIGDSDFAKDDPYFEQTVNRDIFVNSVSWLIMDGDDPTLSIRPKRVIQRTLAISDQMNM LLSVFGIVLLPLTAFATAAALWWQRR
Sequences:
>Translated_586_residues MGSKVINLLSWFSVALMVAGFSAGFVSGQWFSLPLGVMLSGVVLLGISLMWRWQRLSPSNQWWQWRSTQSGTNALVATLA VLVILGLVNFIVVRYPYRADFTEQKTYSLAPQTLNVLSALPKPVEVLVFIGNDPSASDSQSQIVLQNQLLLKEYQRQQPD KFKFRFIDPQAEPGLARKHNIRNLGDISLVYDQRMKLLSSGLSEVTLTPAIALLTNERKATAYVIQGHNEVPLSGFTESL AGAINQLKMEGITVEPLNLSLQQQIPDDADVLVIAGPKLPLLEAEVTLIRDFLKEGGNLFLMLDPEVDVGLKPILEVMGA TLDGRLIVDPKHARLAWPAALTYGEHPITESFSQKLSFFPFAQAVDVQEQPGQLVTPLLQTSEASWAETDLTGQQIQLDQ GRDRKGPLTIGVAIKRSISAPPAKTKPAPQHSASPSPSSSSPTPTASPATESAPSSSATPNTEAAPSPSLAPTPPLSTES VSPPTAESLQPEIKGEAARVVIIGDSDFAKDDPYFEQTVNRDIFVNSVSWLIMDGDDPTLSIRPKRVIQRTLAISDQMNM LLSVFGIVLLPLTAFATAAALWWQRR >Mature_585_residues GSKVINLLSWFSVALMVAGFSAGFVSGQWFSLPLGVMLSGVVLLGISLMWRWQRLSPSNQWWQWRSTQSGTNALVATLAV LVILGLVNFIVVRYPYRADFTEQKTYSLAPQTLNVLSALPKPVEVLVFIGNDPSASDSQSQIVLQNQLLLKEYQRQQPDK FKFRFIDPQAEPGLARKHNIRNLGDISLVYDQRMKLLSSGLSEVTLTPAIALLTNERKATAYVIQGHNEVPLSGFTESLA GAINQLKMEGITVEPLNLSLQQQIPDDADVLVIAGPKLPLLEAEVTLIRDFLKEGGNLFLMLDPEVDVGLKPILEVMGAT LDGRLIVDPKHARLAWPAALTYGEHPITESFSQKLSFFPFAQAVDVQEQPGQLVTPLLQTSEASWAETDLTGQQIQLDQG RDRKGPLTIGVAIKRSISAPPAKTKPAPQHSASPSPSSSSPTPTASPATESAPSSSATPNTEAAPSPSLAPTPPLSTESV SPPTAESLQPEIKGEAARVVIIGDSDFAKDDPYFEQTVNRDIFVNSVSWLIMDGDDPTLSIRPKRVIQRTLAISDQMNML LSVFGIVLLPLTAFATAAALWWQRR
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63797; Mature: 63666
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKVINLLSWFSVALMVAGFSAGFVSGQWFSLPLGVMLSGVVLLGISLMWRWQRLSPSN CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC QWWQWRSTQSGTNALVATLAVLVILGLVNFIVVRYPYRADFTEQKTYSLAPQTLNVLSAL CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHC PKPVEVLVFIGNDPSASDSQSQIVLQNQLLLKEYQRQQPDKFKFRFIDPQAEPGLARKHN CCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHCC IRNLGDISLVYDQRMKLLSSGLSEVTLTPAIALLTNERKATAYVIQGHNEVPLSGFTESL CCCCCCCHHHHHHHHHHHHCCCCCEECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHH AGAINQLKMEGITVEPLNLSLQQQIPDDADVLVIAGPKLPLLEAEVTLIRDFLKEGGNLF HHHHHHHHHCCEEECCCCCHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEE LMLDPEVDVGLKPILEVMGATLDGRLIVDPKHARLAWPAALTYGEHPITESFSQKLSFFP EEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCEECHHHHCCCCCCCHHHHHHHCCCCC FAQAVDVQEQPGQLVTPLLQTSEASWAETDLTGQQIQLDQGRDRKGPLTIGVAIKRSISA CHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCC PPAKTKPAPQHSASPSPSSSSPTPTASPATESAPSSSATPNTEAAPSPSLAPTPPLSTES CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSPPTAESLQPEIKGEAARVVIIGDSDFAKDDPYFEQTVNRDIFVNSVSWLIMDGDDPTL CCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCEEEECEEEEEECCCCCEE SIRPKRVIQRTLAISDQMNMLLSVFGIVLLPLTAFATAAALWWQRR EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GSKVINLLSWFSVALMVAGFSAGFVSGQWFSLPLGVMLSGVVLLGISLMWRWQRLSPSN CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC QWWQWRSTQSGTNALVATLAVLVILGLVNFIVVRYPYRADFTEQKTYSLAPQTLNVLSAL CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHC PKPVEVLVFIGNDPSASDSQSQIVLQNQLLLKEYQRQQPDKFKFRFIDPQAEPGLARKHN CCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHCC IRNLGDISLVYDQRMKLLSSGLSEVTLTPAIALLTNERKATAYVIQGHNEVPLSGFTESL CCCCCCCHHHHHHHHHHHHCCCCCEECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHH AGAINQLKMEGITVEPLNLSLQQQIPDDADVLVIAGPKLPLLEAEVTLIRDFLKEGGNLF HHHHHHHHHCCEEECCCCCHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEE LMLDPEVDVGLKPILEVMGATLDGRLIVDPKHARLAWPAALTYGEHPITESFSQKLSFFP EEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCEECHHHHCCCCCCCHHHHHHHCCCCC FAQAVDVQEQPGQLVTPLLQTSEASWAETDLTGQQIQLDQGRDRKGPLTIGVAIKRSISA CHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCC PPAKTKPAPQHSASPSPSSSSPTPTASPATESAPSSSATPNTEAAPSPSLAPTPPLSTES CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSPPTAESLQPEIKGEAARVVIIGDSDFAKDDPYFEQTVNRDIFVNSVSWLIMDGDDPTL CCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCEEEECEEEEEECCCCCEE SIRPKRVIQRTLAISDQMNMLLSVFGIVLLPLTAFATAAALWWQRR EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA