| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is trpD [H]
Identifier: 158336071
GI number: 158336071
Start: 2967260
End: 2968303
Strand: Reverse
Name: trpD [H]
Synonym: AM1_2932
Alternate gene names: 158336071
Gene position: 2968303-2967260 (Counterclockwise)
Preceding gene: 158336072
Following gene: 158336070
Centisome position: 45.64
GC content: 55.84
Gene sequence:
>1044_bases ATGACCTTAGCACCAGATACCCTAGACGGGTCTCAACTCCTCCAACAACTCCTAGACGGTCAGTCCTTGACCCAAGCAGA AGCCTCGCAATTGATGGAAGGCTGGCTTCAAGACGCTGTCCCTCCCGTCCTGTCGGGAGCGATCTTGGCCGCCCTGCAAG CCAAAGGCGTGTCAGCAGATGAGCTATCAGGGATGGCCACCGTGCTCTTGCAGCAATCGGTGGAGTCAGGGGTCGCAATG CCCAGTCCCTTGATTGACACCTGTGGAACTGGCGGCGATGGCGCTTCAACCTTTAATATCTCCACTGCCGTTGCCTTTAC GGCAGCTGCTGCTGGGCTTCCGGTGGCTAAGCATGGCAACCGCTCTGCCTCTAGTCGGGTCGGATCCGCTGACGTGCTGG AAGCCTTGGGCATTAATCTGGCTGCCCCACCGGAAAAAATTCAGGCTGCTGTGGCAGAAGTCGGGATTACATTTTTGTTT GCTCCGGGCTGGCATCCGGCCATGAAAGCGGTGGTGCCCCTGCGTAAGACCCTAAAAGTACGCACCATCTTCAATCTATT GGGGCCCTTAGTGAATCCCCTCCGACCCACGGGGCAGGTCCTAGGGGTCTACGATCCAGCACTGCTGTATCCCCTCGCCT CGGCGCTCAAGACCCTGGGTGTGCAAAGAGCGGTCGTTTTGCATGGGCGAGAAAACTTAGATGAAGCCGGATTAGGCGAT CTGACGGATATCGCAGTGGTTGATCAGCAACAGGTAAGCCAGGATATTTTAGAGCCTGCGGAATTAGGGTTGACTGCGGC CCCGCTGACGGCCCTAAAAGGCGGTGGTGTGGACGAAAATGCCGCTATTTTACAAGCGGTGCTCCAAGGCAAAGGCACAT CTGCCCAAACCGATGTTGTGGCCCTGAATACAGCATTAGCCTTATTTGTCGGTCATGCTGTAGAGACCTATGCTGAGGGA GTGACTCAAGCCAAAGCCATTCTGGCTAGCGGTGCTGCTTGGCAGAAGTTGCAGCAGTTAGTGGCTTTTTTACAGCAGGC TTAG
Upstream 100 bases:
>100_bases ATCGCATTCTATGAAACACTAGGAGCAACCGTTCTCCCCGATTGGCGAACTTGTCGAGTCACGGGGGCTGCTCTCACCAC TCTAGCCTCAGGATAGTGTT
Downstream 100 bases:
>100_bases GCCCTCGGCACATTCTGAGGACTGTGCCAGAATGAAAGTCATGCATTGTCTTTTTAGTTTTGATTGTGATTGAGGTCGAA GTTCATCGCCAACTCCATGC
Product: anthranilate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTLAPDTLDGSQLLQQLLDGQSLTQAEASQLMEGWLQDAVPPVLSGAILAALQAKGVSADELSGMATVLLQQSVESGVAM PSPLIDTCGTGGDGASTFNISTAVAFTAAAAGLPVAKHGNRSASSRVGSADVLEALGINLAAPPEKIQAAVAEVGITFLF APGWHPAMKAVVPLRKTLKVRTIFNLLGPLVNPLRPTGQVLGVYDPALLYPLASALKTLGVQRAVVLHGRENLDEAGLGD LTDIAVVDQQQVSQDILEPAELGLTAAPLTALKGGGVDENAAILQAVLQGKGTSAQTDVVALNTALALFVGHAVETYAEG VTQAKAILASGAAWQKLQQLVAFLQQA
Sequences:
>Translated_347_residues MTLAPDTLDGSQLLQQLLDGQSLTQAEASQLMEGWLQDAVPPVLSGAILAALQAKGVSADELSGMATVLLQQSVESGVAM PSPLIDTCGTGGDGASTFNISTAVAFTAAAAGLPVAKHGNRSASSRVGSADVLEALGINLAAPPEKIQAAVAEVGITFLF APGWHPAMKAVVPLRKTLKVRTIFNLLGPLVNPLRPTGQVLGVYDPALLYPLASALKTLGVQRAVVLHGRENLDEAGLGD LTDIAVVDQQQVSQDILEPAELGLTAAPLTALKGGGVDENAAILQAVLQGKGTSAQTDVVALNTALALFVGHAVETYAEG VTQAKAILASGAAWQKLQQLVAFLQQA >Mature_346_residues TLAPDTLDGSQLLQQLLDGQSLTQAEASQLMEGWLQDAVPPVLSGAILAALQAKGVSADELSGMATVLLQQSVESGVAMP SPLIDTCGTGGDGASTFNISTAVAFTAAAAGLPVAKHGNRSASSRVGSADVLEALGINLAAPPEKIQAAVAEVGITFLFA PGWHPAMKAVVPLRKTLKVRTIFNLLGPLVNPLRPTGQVLGVYDPALLYPLASALKTLGVQRAVVLHGRENLDEAGLGDL TDIAVVDQQQVSQDILEPAELGLTAAPLTALKGGGVDENAAILQAVLQGKGTSAQTDVVALNTALALFVGHAVETYAEGV TQAKAILASGAAWQKLQQLVAFLQQA
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0547
COG function: function code E; Anthranilate phosphoribosyltransferase
Gene ontology:
GO:0000162: Anthranilate phosphoribosyltransferase
GO:0004048: Anthranilate phosphoribosyltransferase
GO:0008152: Anthranilate phosphoribosyltransferase
GO:0008652: Anthranilate phosphoribosyltransferase
GO:0009073: Anthranilate phosphoribosyltransferase
GO:0016740: Anthranilate phosphoribosyltransferase
GO:0016757: Anthranilate phosphoribosyltransferase
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=333, Percent_Identity=39.9399399399399, Blast_Score=208, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6320561, Length=276, Percent_Identity=31.5217391304348, Blast_Score=122, Evalue=7e-29,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005940 - InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 [H]
Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]
EC number: =2.4.2.18 [H]
Molecular weight: Translated: 35479; Mature: 35348
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAPDTLDGSQLLQQLLDGQSLTQAEASQLMEGWLQDAVPPVLSGAILAALQAKGVSAD CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH ELSGMATVLLQQSVESGVAMPSPLIDTCGTGGDGASTFNISTAVAFTAAAAGLPVAKHGN HHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC RSASSRVGSADVLEALGINLAAPPEKIQAAVAEVGITFLFAPGWHPAMKAVVPLRKTLKV CHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH RTIFNLLGPLVNPLRPTGQVLGVYDPALLYPLASALKTLGVQRAVVLHGRENLDEAGLGD HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCCC LTDIAVVDQQQVSQDILEPAELGLTAAPLTALKGGGVDENAAILQAVLQGKGTSAQTDVV CHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHH ALNTALALFVGHAVETYAEGVTQAKAILASGAAWQKLQQLVAFLQQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TLAPDTLDGSQLLQQLLDGQSLTQAEASQLMEGWLQDAVPPVLSGAILAALQAKGVSAD CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH ELSGMATVLLQQSVESGVAMPSPLIDTCGTGGDGASTFNISTAVAFTAAAAGLPVAKHGN HHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC RSASSRVGSADVLEALGINLAAPPEKIQAAVAEVGITFLFAPGWHPAMKAVVPLRKTLKV CHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH RTIFNLLGPLVNPLRPTGQVLGVYDPALLYPLASALKTLGVQRAVVLHGRENLDEAGLGD HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCCC LTDIAVVDQQQVSQDILEPAELGLTAAPLTALKGGGVDENAAILQAVLQGKGTSAQTDVV CHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHH ALNTALALFVGHAVETYAEGVTQAKAILASGAAWQKLQQLVAFLQQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA